Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryphonectria_20radicalis_20[genbank_20GCA_5F002179595.1_202017-06-
08] 2,318 sequences; 41,022,676 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq1933 205 1e-47
seq1567 111 2e-19
seq1057 100 4e-16
>seq1933
Length=42650
Score = 205 bits (226), Expect = 1e-47
Identities = 939/1466 (64%), Gaps = 40/1466 (3%)
Strand=Plus/Minus
Query 111922 ATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTG 111981
|||| || || || ||||| || || || ||| ||| || ||||| || |||| | ||
Sbjct 26737 ATGGCATCATCCCCATGCTGCGTGTCTTCAACAACACTGCTCGCTACGTCGACCAGGGTG 26678
Query 111982 G------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCA 112035
| ||| | | || | | || |||| || ||||| |||||||| ||| ||
Sbjct 26677 GCAACAAGCGCCCC---GGTGCCTTTGCCATCTACCTGGAGCCGTGGCACGCTGATGTCT 26621
Query 112036 TGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGC-CGCGATCTC 112094
| |||||||| || |||| ||||| || | || |||| || ||| || || |||
Sbjct 26620 TCGAGTTCCTCGACCTGCGCAAGAACCACGGAAAGGAAGAGGTCCG-TGCTCGTGACCTC 26562
Query 112095 TTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGG 112154
||| || |||||||| || ||||||||||||||| | || ||| ||| ||| | |||
Sbjct 26561 TTCCTGGCCCTCTGGATCCCTGATCTCTTCATGAAGCGTGTGGAGAAGAACGGCGACTGG 26502
Query 112155 TCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAA 112214
| || | || || || || ||||| || |||| | || |||||||| ||
Sbjct 26501 ACCCTTATGTGCCCCAACGAGTGTCCCGGCCTGGCCGACTGCTACGGCGAGGAGTTCGAG 26442
Query 112215 GCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC-GACGGTGCCAGCTGCCGA 112273
||| | ||| ||||| ||| || |||| | | | | ||| || || | ||
Sbjct 26441 GCCTTGTACGAGAAGTATGAGCGCGAGGGTCGCG-GCCAGAAGACCTTGAAGGCA-CAGA 26384
Query 112274 TG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACA 112332
| ||||| | || || ||| || | || |||||||| || | |||| ||||| ||||
Sbjct 26383 AGCTGTGGTATGCCATCCTCGAGGCGCAGACCGAGACCGGCAACCCATTCATGCTGTACA 26324
Query 112333 AAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACC 112392
| ||| | |||| ||||| || || ||||| |||| ||| || |||||||
Sbjct 26323 AGGACCACGCCAACCGCAAGAGCAACCAGAAGAACCTGGGCACCATCCGCAGCTCCAACC 26264
Query 112393 TCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCAT 112452
|||| || || ||| | || | | | | || ||| ||||| || ||||| || |
Sbjct 26263 TCTGCACGGAGATCATCGAGTACTCTGCCCCTGACGAGGTTGCTGTCTGCAACCTGGCGT 26204
Query 112453 CAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTG--ATTATGAAAAACT 112510
| ||||| || || ||| || || |||| | ||| | | | | ||
Sbjct 26203 CCATCGCCCTGCCTCAGTTCGTCGACTATGAGA--ACGACTGCTACAACTTCCAGCTGCT 26146
Query 112511 CCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTA 112570
|||||||| || || |||| ||||| |||| | | |||| || | ||
Sbjct 26145 GCACGAAGTCACCCAAGTTGTCGTCCGCAACCTGAACAAGATCGTCGATATCAACTACTA 26086
Query 112571 CCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCA 112630
|| || || ||||| || || ||| | ||||| || || || | || || ||
Sbjct 26085 TCCTGTCCAGGAGGCTCGCAACAGCAACATGCGCCACCGCCCTATCGGCGTGGGCGTTCA 26026
Query 112631 AGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGA 112690
||||| || |||| ||| | | |||| | || || || || || |
Sbjct 26025 GGGTCTGGCTGATGCCTTCTTGGCTCTCCGCCTGCCCTTCGAGTCGCCTGAGGCCCGTCA 25966
Query 112691 AATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGA-GTTCGGAGT 112749
| || || || |||||||| || || |||||||| || || || || |
Sbjct 25965 GCTGAACAAGCAGATCTTTGAGACCATCTACCACGCCGCCCTCACCGCATCGTGCGACAT 25906
Query 112750 TGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGC 112809
|| || |||| || ||||| || | | ||||| ||||| | ||| || || | |
Sbjct 25905 TGCCA-AGGTGGACGGTCCCTACTTGTCGTACGAGGGATCTCCCGTTTCTCAGGGTATCC 25847
Query 112810 TTCAATTTGATATGTGGGA--AGGTGA-GACCAAGCTTCACTACGACTGGGACGCTCTCA 112866
|||| | || |||||||| | || | | || | | || ||||||||||| || |
Sbjct 25846 TTCAGTACGACATGTGGGACAACGTCAAGCCCTCGGACCTCTGGGACTGGGACGCCCTGA 25787
Query 112867 AGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAG 112926
||| |||||| || | || | || ||||| | |||||||| || ||||| || |
Sbjct 25786 AGGCCAAGATCAAGCAGCATGGCGTCCGCAACAGCTTGTTGATGGCGCCTATGCCCACTG 25727
Query 112927 CCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCT 112986
|||| ||| | || ||| |||| || || || |||||||| ||||||||| | |||||||
Sbjct 25726 CCTCGACCTCGCAGATCCTGGGCAACAACGAGTGCTTTGAGCCCTACACGTCCAACATCT 25667
Query 112987 ATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCAT--CTCGTGGATGA 113044
| | | | | ||||| || ||||| | | |||||| ||| || | | ||
Sbjct 25666 ACCAGCGGCGTGTGCTCGCTGGTGAGTTCCAGGTGGTCAAC--CCATGGCTGCTCAAGGA 25609
Query 113045 CCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGG 113104
||| || |||||| |||||| |||| ||||| | | ||| | | || |||
Sbjct 25608 CCTTGTGCAGTGTGGTCTGTGGTCCGAGGACCTGAAGAACCGCATCATCGCCGAGGATGG 25549
Query 113105 TTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAAGTTGTACCGCACAGTTTG 113164
||| || || || ||| || || ||||| || ||| | ||| || || ||
Sbjct 25548 TTCTATCCAGAACATTCGCAGCATCCCGGATGATATCAAGGCCCTCTACAAGACCGTCTG 25489
Query 113165 GGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCGC-TTCATTGATC 113223
||| ||| | || | || | | |||||||| || ||||| ||| ||||| || |
Sbjct 25488 GGAGATCTCGCAGAGGACCATCGTCCAGATGGCCGCCGACCGTGG-CGCTTTCATCGACC 25430
Query 113224 AAAGTCAAAGT--ATGAATCTATTCATG---GAAAGTCCAACGATGTCCAAGCTCTCTTC 113278
|||| ||| |||| | |||| ||| || | ||| |||| || |
Sbjct 25429 --AGTCTCAGTCCCTGAACATCCACATGCGTGAA---CCTTCTATGGGCAAGATCACGAG 25375
Query 113279 TATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCTCCGATCTAA 113338
|||||| | | | |||||| ||||||||| || || ||||| |||||||| | |
Sbjct 25374 CATGCACTTCACCGGATGGAAGCTGGGTCTCAAGACTGGCATGTACTACCTCCGCACCCA 25315
Query 113339 GGCAAAGGCGCGCCCAATTCAGTTCA 113364
||| ||| ||| ||||||||||
Sbjct 25314 GGCGGCGGCAGCCCCGATTCAGTTCA 25289
>seq1567
Length=91444
Score = 111 bits (122), Expect = 2e-19
Identities = 108/139 (78%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 102181 AGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTA 102240
|||| || ||||||| || || ||||||||||||||| || ||||| | | |
Sbjct 45153 AGCGCCTTGTCGCATTCGCTGCCGTCGAGGGTATCTTCTTCAGCGGCGCCTTCGCCTCCA 45212
Query 102241 TTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCT 102300
| | |||||||||||||| || || ||||| ||||| ||||||||||||||| ||||
Sbjct 45213 TCTTCTGGCTCAAGAAGCGTGGCCTGATGCCTGGTCTGACCTTCTCCAACGAGCTGATCT 45272
Query 102301 CTCGTGACGAGGGACTCCA 102319
||||||||||||| || ||
Sbjct 45273 CTCGTGACGAGGGTCTACA 45291
>seq1057
Length=53502
Score = 100 bits (110), Expect = 4e-16
Identities = 214/317 (68%), Gaps = 2/317 (1%)
Strand=Plus/Plus
Query 16064 GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAG 16123
|||||||||||| ||||||||||||||||| || || | || || |||||||
Sbjct 21602 GGCATCAATCTCGTCAATGAAGACGATGCAGGGCGCGTTCTTCCGGGCCTGCGCAAAGAG 21661
Query 16124 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-AC 16182
|| || || | | ||| || ||||| ||||||||||| || || | | | || ||
Sbjct 21662 GTCGCGCACTCTCGAGGCACCGACACCGACAAACATCTCGACGAATTCGGAGCCGCTGAC 21721
Query 16183 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 16242
| || | ||| || || || ||||| || | || |||||| || |||||||| |
Sbjct 21722 ACTGAA-GAACGGCACGCCCGACTCACCGGCGGTCGCCTTGGCGAGCAGCGTCTTACCAG 21780
Query 16243 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTTCCAAAGTATC 16302
|||| ||| || | | || ||| || || |||||||||||||| || | | |
Sbjct 21781 TACCGGGCGGGCCAGACAAGATGGCGCCACGCGGAATCTTGGCGCCGAGTCGCTGGAAGC 21840
Query 16303 TCTCAGGTTGCTTAAGAAAATCCACAATCTCTTCCAATTCATCTTTGGCGGCGTCAATCC 16362
||| || ||||| || || | |||| ||| | || | ||||| |||| || |
Sbjct 21841 GCTCCGGCTGCTTCAGGAACGCGACAAACTCCATGATCTCGACCTTGGCTTCGTCCATGC 21900
Query 16363 CCTCAACATCGGTAAAC 16379
|| | | |||| ||||
Sbjct 21901 CCGCGATGTCGGCAAAC 21917
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620724413988960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |