Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryphonectria_20radicalis_20[genbank_20GCA_5F002179595.1_202017-06-
08] 2,318 sequences; 41,022,676 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq1933 502 5e-137
seq1567 165 2e-35
>seq1933
Length=42650
Score = 502 bits (556), Expect = 5e-137
Identities = 1162/1730 (67%), Gaps = 52/1730 (3%)
Strand=Plus/Plus
Query 212696 GTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATC 212755
||||||||||||| |||||| ||||| | | | | ||| |||||||| | | |||
Sbjct 25413 GTTCAGGGACTGAGACTGGTCGATGAAAGCGCCACGGTCGGCGGCCATCTGGACGATGGT 25472
Query 212756 TCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGG 212815
||||| |||| |||||| ||||||||| ||| | |||| || || |||| || | |
Sbjct 25473 CCTCTGCGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATATCATCCGGGATGCTGCG 25532
Query 212816 GATGTTCTGCACAGACCC--CCTGTGT-ATGGTCAGCTGCAGGCGCATGTCCTCGTTCCA 212872
|||||||| | ||| || ||| | ||| | | | | || ||||||| |||
Sbjct 25533 AATGTTCTGGATAGAACCATCCTCGGCGATGATGCGGTTCTT---CAGGTCCTCGGACCA 25589
Query 212873 GAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTCACCTGA 212932
|| || | | | ||| ||||| ||| |||||||| | |||||| ||||| |
Sbjct 25590 CAGACCACACTGCACAAGGTCCTTGAGCAGCCATGGGTTGACCACCTGGAACTCACCAGC 25649
Query 212933 GAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAG 212992
|||||| | || |||||| | ||| || ||||||||||| | || ||||||||| |||||
Sbjct 25650 GAGCACACGCCGCTGGTAGATGTTGGACGTGTAGGGCTCAAAGCACTCGTTGTTGCCCAG 25709
Query 212993 AATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTG 213052
||||| | || ||| |||||||| || |||| || | ||||| | || || ||
Sbjct 25710 GATCTGCGAGGTCGAGGCAGTGGGCATAGGCGCCATCAACAAGCTGTTGCGGACGCCATG 25769
Query 213053 CTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTT 213112
|| ||| | | || | |||||||||| |||||| | |||
Sbjct 25770 CTGCTTGATCTTGGCCTTCAGGGCGTCCCAGTCCCAG---------AGGTCCGAGGGCTT 25820
Query 213113 CACGTT---CCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGA 213169
||||| ||||||||| |||| | ||| || | ||||| |||| ||| ||
Sbjct 25821 GACGTTGTCCCACATGTCGTACTGAAGGATACCCTGAGAAACGGGAGATCCCTCGTACGA 25880
Query 213170 GGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGAT 213229
||||||| || | | ||||||| | ||||| || || ||||| |||| ||||||
Sbjct 25881 CAAGTAGGGACCGTCCACCTTGGCAATGTCGCACGATGCGGTGAGGGCGGCGTGGTAGAT 25940
Query 213230 GGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCAT 213289
||| ||||| |||| | |||| |||| |||||| || ||| |||||||| |
Sbjct 25941 GGTCTCAAAGATCTGCTTGTTCAGCTGACGGGCCTCAGGCGACTCGAAGGGCAGGCGGAG 26000
Query 213290 GCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTT 213349
||| |||||||||| ||||| || || | |||||| || | ||| | || |||
Sbjct 26001 AGCCAAGAAGGCATCAGCCAGACCCTGAACGCCCACGCCGATAGGGCGGTGGCGCATGTT 26060
Query 213350 AGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGC 213408
||| |||| ||||| | || || ||||| |||| ||||||||| |||||||
Sbjct 26061 GCTGTTGCGAGC-CTCCTGGACAGGATAGTAGTTGATATCGACGATCTTGTTCAGGTTGC 26119
Query 213409 GGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCT 213468
|| | | |||| |||||| | | ||| || | ||| | || | | | | |
Sbjct 26120 GGACGACAACTTGGGTGACTTCGTGCAGCAGCTGGAAGTTGTAGCAGTCGTTCTCATAGT 26179
Query 213469 GCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTG 213528
|| |||| ||||||||||||| ||||||||||| || || ||||| | || | | |
Sbjct 26180 CGACGAACTGAGGCAGGGCGATGGACGCCAGGTTGCAGACAGCAACCTCGTCAGGGGCAG 26239
Query 213529 TGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGT 213588
|||||| |||||||| ||||| |||||| || ||||||||||||||||||| ||||
Sbjct 26240 AGTACTCGATGATCTCCGTGCAGAGGTTGGAGCTGCGGATGGTGCCCAGGTTCTTCTGGT 26299
Query 213589 TTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGG 213648
| ||| |||||| |||||||| |||||| | ||| |||||||| ||| |
Sbjct 26300 TGCTCTTGCGGTTGGCGTGGTCCTTGTACAGCATGAATGGGTTGCCGGTCTCGGTCTGCG 26359
Query 213649 ACACCAGTATCTGGCT--CCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGG 213706
| | || || ||| ||| || | | ||||| | | | || | || |
Sbjct 26360 CCTCGAGGAT--GGCATACCACAGCTTCTGTGCCTTCAAGGTCTTC-TGGCCGCGAC--- 26413
Query 213707 CGTAGC-CTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTC 213765
| | || ||| |||| ||||| | | | ||| || | ||| || | |||| |
Sbjct 26414 CCTCGCGCTCATACTTCTCGTACAAGGCCTCGAACTCCTCGCCGTAGCAGTCGGCCAGGC 26473
Query 213766 CCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCGT-CATCTCTGACTCTCTGCATG 213824
| ||||| ||| ||||| ||| ||||||| |||| | |||| || | || ||||
Sbjct 26474 CGGGACACTCGTTGGGGCACATAAGGGTCCAGTCGCCGTTCTTCTCC-ACACGCTTCATG 26532
Query 213825 AACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCA 213884
|| || || |||| ||| || || ||| ||||| | | | ||| ||| |||
Sbjct 26533 AAGAGATCAGGGATCCAGAGGGCCAGGAAGAGGTCACGAGCACGGACCTCTTCCTTTCCG 26592
Query 213885 GAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATG 213944
||| |||||||| || || || || |||| || |||||||||||||||| |||||||
Sbjct 26593 TGGTTCTTGCGCAGGTCGAGGAACTCGAAGACATCAGCGTGCCACGGCTCCAGGTAGATG 26652
Query 213945 GCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCACCAGCCTGGCCACCA----TGTT 213997
|||||||| || | || | ||||| |||||||| | | | || | || ||||
Sbjct 26653 GCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGA----CGTAGCGAGCAGTGTTGTT 26708
Query 213998 GAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGA 214057
||||| ||||| | ||| | | || || ||| |||||||| || || ||||| ||
Sbjct 26709 GAAGACACGCAGCATGGGGATGATGCCATTAGACGTGCCGTTGGTGCCGGCAATATAGGA 26768
Query 214058 GCCGGAGGCCCTCA--GGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATC 214115
||| | ||| | | | || ||| |||| || ||||| ||||| ||||||||||
Sbjct 26769 GCCAGTGGCACGGATGCGGTGGACATTGAGA--CCAATGCCTCCGGCCATCTTGGAGATC 26826
Query 214116 ATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGC 214175
||||| ||| | | | || || ||| || | ||||| || || | | || ||
Sbjct 26827 ATGGCACAGGTCTTGAGGGTGTCATAGATACCCTCGATGCTATCCTCCTTCATGTCCACT 26886
Query 214176 AAGAAGCAGCTCGAGAGCTGGGGCCTG-GACGAGCCAGAGTTGAAAAGCGTGGGGCTGGC 214234
| |||||| || |||| | ||||| | || ||| | |||||| || || || ||
Sbjct 26887 AGGAAGCACGATGACAGCT-GTGCCTGAGGCGTGCCGGCGTTGAATAGAGTCGGCGAAGC 26945
Query 214235 ATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTG 214294
|| | | |||||||| |||||| ||||||||||||| || ||||| ||
Sbjct 26946 GTGTGTGAAGAACTTGTTGGAGAGGTAGTTGTAGGTCTCCAGAACCCTCTCGATGTTGTC 27005
Query 214295 CTTGTGGATCTGTAGAGCGCACCTCATCAGCATGTGCTGGGGCCTCTCTATGGGTCCTT- 214353
||| | ||| | ||||||||||||||| |||| ||| | | ||||
Sbjct 27006 TCCCCAGATGCCAACGGCGACACGCATCAGCATGTGCTGTGGCCGCTCGA--CGACCTTG 27063
Query 214354 -TGGGGCCCTTGAGCAGGTAGGAGCGCTCCAGAGTCTTGAACCCAAAGTA 214402
| | |||||| || || ||||||||||| |||||||| || |||||
Sbjct 27064 CCGTTGAGCTTGAGGAGATACGAGCGCTCCAGGGTCTTGAAGCCGAAGTA 27113
>seq1567
Length=91444
Score = 165 bits (182), Expect = 2e-35
Identities = 349/515 (68%), Gaps = 7/515 (1%)
Strand=Plus/Minus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||||||||| || || | ||||| |||||||| ||||| || | | |||||||||||
Sbjct 45595 CTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTC 45536
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957
||||||| ||||||||||| | || || ||| | || ||| | | || |
Sbjct 45535 CATGAAGTCGAAGGGGTTGGAAGACTTGTAGACCT-TCTCGTTGCCGAGGGCGACGAGGA 45477
Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017
| | || |||||| |||| ||||| | ||| |||||| ||||||||| | |||
Sbjct 45476 GACGGTCGGCGACGAACTCAATGTACTGCTTCATCAGGGTGGCGTTCATGCCGAGCAGGC 45417
Query 48018 ACAC-GGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076
||| ||||| |||| || || ||||||||||| || ||||| ||| | ||
Sbjct 45416 -CACAGGGCAGGGCCTCAGTCAGGAACTCCTTCTCAATGACAACGGCATCCGTGATGATA 45358
Query 48077 TGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCA 48136
|| ||||| || ||| |||| |||||| || | |||| ||||||
Sbjct 45357 GCCTCTACGCGCTGCTTGCTGGGCCGGTTGTTCAGGTG---GGAGAACAGCAGGCAGGCG 45301
Query 48137 AAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGC 48196
||||| | || | || ||||| || ||| ||| ||||||||||| |||||||||
Sbjct 45300 AAGTCAGTATGTAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAGGTCAGACCAGGC 45241
Query 48197 ATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCC 48256
|| | || | || ||||||||||| || | ||||| | ||| ||||||||| |||
Sbjct 45240 ATCAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCGCCGCTGAAGAAGATACCC 45181
Query 48257 TCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAG 48316
|| || || ||||| ||| || | || || | | | | | ||| ||||||
Sbjct 45180 TCGACGGCAGCGAATGCGACAAGGCGCTGCGCGTAGGTGGACTCCCGGTCCTGGATCCAC 45121
Query 48317 GAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351
|| |||||||| |||||||| |||||| ||
Sbjct 45120 CTCAGAGCCCAGTCGGCCTTCTTGCGGATGCAAGG 45086
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931505808837120
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