Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryphonectria_20radicalis_20[genbank_20GCA_5F002179595.1_202017-06-
08] 2,318 sequences; 41,022,676 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq1933 226 3e-54
seq1057 96.9 4e-15
>seq1933
Length=42650
Score = 226 bits (250), Expect = 3e-54
Identities = 1128/1772 (64%), Gaps = 32/1772 (2%)
Strand=Plus/Minus
Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271
|||||| ||||| | ||||| ||||| | |||||| || || |||| || ||
Sbjct 27047 CCACAGCACATGCTGATGCGTGTCGCCGTTGGCATCTGGGGAGACAACATCGAGAGGGTT 26988
Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330
||||||| ||| || | | ||| | | || | |||| ||||| | || || || ||
Sbjct 26987 CTGGAGACCTACAACTACCTCTCCAACAAGT-TCTTCACACACGCTTCGCCGACTCTATT 26929
Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390
||| || || || || | ||| |||| |||||||| | | || ||||||||
Sbjct 26928 CAACGCCGGCACGCCTCAGGCACAGCTGTCATCGTGCTTCCTAGTGGACATGAAGGAGGA 26869
Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450
||| | |||||||||| || || | | ||||| ||||| ||| ||| ||
Sbjct 26868 TAGCATCGAGGGTATCTATGACACCCTCAAGACCTGTGCCATGATCTCCAAGATGGCCGG 26809
Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510
|| ||||| | | |||| | | |||| | || |||| || || ||
Sbjct 26808 AGGCATTGGTCTCAATGTCCACCGCATCCGTGCCACTGGCTCCTATATTGCCGGCACCAA 26749
Query 75511 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 75570
|| || |||| || || || ||||| || || || ||| ||| || ||||| ||
Sbjct 26748 CGGCACGTCTAATGGCATCATCCCCATGCTGCGTGTCTTCAACAACACTGCTCGCTACGT 26689
Query 75571 AAATCAAGCGGGGCGTC----GCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCATG 75626
| || | | ||| | || || || | || ||||| |||| || ||||| |
Sbjct 26688 CGACCAGG-GTGGCAACAAGCGCCCCGGTGCCTTTGCCATCTACCTGGAGCCGTGGCACG 26630
Query 75627 CCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG-T 75685
| ||| || | |||||||| || | || ||||| || | ||||||| || ||| |
Sbjct 26629 CTGATGTCTTCGAGTTCCTCGACCTGCGCAAGAACCACGGAAAGGAAGAGG-TCCGTGCT 26571
Query 75686 AGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGT 75745
| || ||||| |||| ||||| || || || ||||||||||| || ||| ||
Sbjct 26570 CGTGACCTCTTCCTGGCCCTCTGGATCCCTGATCTCTTCATGAAGCGTGTGGAGAAGAAC 26511
Query 75746 GGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAG 75805
|| | ||| | ||| | || || || || || || || ||||| || |||
Sbjct 26510 GGCGACTGGACCCTTATGTGCCCCAACGAGTGTCCCGGCCTGGCCGACTGCTACGGCGAG 26451
Query 75806 GAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCA 75865
||||| || ||| | ||| |||||||| |||||| | | | | ||| | |
Sbjct 26450 GAGTTCGAGGCCTTGTACGAGAAGTATGAGCGCGAGGGTCGCGGCCAGAAGACCTTGA-A 26392
Query 75866 GCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATAT 75924
| | | || | | ||| | || || ||| | | ||||| ||||| || | |||| ||
Sbjct 26391 GGCACAGAAGCTGTGGTATGCCATCCTCGAGGCGCAGACCGAGACCGGCAACCCATTCAT 26332
Query 75925 GCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAG 75984
||| |||||||| ||| ||||| ||||| ||||| |||| || ||| ||
Sbjct 26331 GCTGTACAAGGACCACGCCAACCGCAAGAGCAACCAGAAGAACCTGGGCACCATCCGCAG 26272
Query 75985 CTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAA 76044
||| || || |||||||| || | |||||| | | || ||| ||||| |||||
Sbjct 26271 CTCCAACCTCTGCACGGAGATCATCGAGTACTCTGCCCCTGACGAGGTTGCTGTCTGCAA 26212
Query 76045 TTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTG--ATTAT 76102
|||| || |||||||| || ||| ||| | | |||| || ||| | | |
Sbjct 26211 CCTGGCGTCCATCGCCCTGCCTCAGTTCGTCGACTATGAGAA-CG-ACTGCTACAACTTC 26154
Query 76103 GAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGA 76162
| || || ||| |||| | |||| | || || ||| || | || |
Sbjct 26153 CAGCTGCTGCACGAAGTCACCCAAGTTGTCGTCCGCAACCTGAACAAGATCGTCGATATC 26094
Query 76163 AATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTG 76222
|| | ||||| || || || || || || ||||| ||| | ||||| || ||
Sbjct 26093 AACTACTATCCTGTCCAGGAGGCTCGCAACAGCAACATGCGCCACCGCCCTATCGGCGTG 26034
Query 76223 GGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAA 76282
|| ||||| ||||| || |||| || | |||| | || || || |||
Sbjct 26033 GGCGTTCAGGGTCTGGCTGATGCCTTCTTGGCTCTCCGCCTGCCCTTCGAGTCGCCTGAG 25974
Query 76283 GCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGT 76342
||| || |||| | |||||||| ||||| || ||||| |||| ||
Sbjct 25973 GCCCGTCAGCTGAACAAGCAGATCTTTGAGACCATCTACCACGCCGCCCTCACCGCATCG 25914
Query 76343 TGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAA 76402
|| || | || | | | ||| |||| | | | ||||| ||||||| || ||
Sbjct 25913 TGCGACATTGCCAAGGTGGACGGTCCCTACTTGTCGTACGAGGGATCTCCCGTTTCTCAG 25854
Query 76403 GGGGTGCTTCAGTTTGATATGTGGGA--AGGTGAAACCAA-GCTCAACTACGACTGGGAT 76459
|| | ||||||| || |||||||| | || || || | | || ||||||||
Sbjct 25853 GGTATCCTTCAGTACGACATGTGGGACAACGTCAAGCCCTCGGACCTCTGGGACTGGGAC 25794
Query 76460 GTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATG 76519
| || |||| |||||| || | || | || ||||| | |||||||| || |||
Sbjct 25793 GCCCTGAAGGCCAAGATCAAGCAGCATGGCGTCCGCAACAGCTTGTTGATGGCGCCTATG 25734
Query 76520 CCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACA 76579
|| || ||||| ||| | || ||| |||| || || || |||||||| || ||||| |
Sbjct 25733 CCCACTGCCTCGACCTCGCAGATCCTGGGCAACAACGAGTGCTTTGAGCCCTACACGTCC 25674
Query 76580 AACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTCGTC 76639
|||||||||| | | | ||||| |||||||| | |||||| || ||
Sbjct 25673 AACATCTACCAGCGGCGTGTGCTCGCTGGTGAGTTCCAGGTGGTCAACCCATGGCTGCTC 25614
Query 76640 AATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCG 76699
|| ||||| | || |||||| |||||| |||| ||||| | | ||| | | |
Sbjct 25613 AAGGACCTTGTGCAGTGTGGTCTGTGGTCCGAGGACCTGAAGAACCGCATCATCGCCGAG 25554
Query 76700 GGTGGTTCCATTCAAAATAT-CTCAGATATCCCAGATGATATCAAGAATCTCTACCGCAC 76758
| |||||| || || || || | ||| ||||| |||||||||||| |||||| ||
Sbjct 25553 GATGGTTCTATCCAGAACATTCGCAGC-ATCCCGGATGATATCAAGGCCCTCTACAAGAC 25495
Query 76759 AGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGATCGTGGTCGC-TTCA 76817
|| ||||| ||| | || || | | |||||||| || ||||| ||| ||||
Sbjct 25494 CGTCTGGGAGATCTCGCAGAGGACCATCGTCCAGATGGCCGCCGACCGTGG-CGCTTTCA 25436
Query 76818 TTGATCAAAGTCAAAGT--ATGAATCTATTCATG---GAAAGTCCAACGATGTCCAAGCT 76872
| || | |||| ||| |||| | |||| ||| || | ||| |||| |
Sbjct 25435 TCGACC--AGTCTCAGTCCCTGAACATCCACATGCGTGAA---CCTTCTATGGGCAAGAT 25381
Query 76873 CTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGTACTATCTCCG 76932
| | ||||| | || ||||| | ||| ||||| || || |||||||| |||||
Sbjct 25380 CACGAGCATGCACTTCACCGGATGGAAGCTGGGTCTCAAGACTGGCATGTACTACCTCCG 25321
Query 76933 ATCAAAGGCGAAAGCCCGACCAATTCAGTTCA 76964
| ||||| || || ||||||||||
Sbjct 25320 CACCCAGGCGGCGGCAGCCCCGATTCAGTTCA 25289
>seq1057
Length=53502
Score = 96.9 bits (106), Expect = 4e-15
Identities = 159/226 (70%), Gaps = 4/226 (2%)
Strand=Plus/Minus
Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335
|| |||||||| || || |||||| | | | || ||| ||||| || ||||| ||
Sbjct 21826 GGCGCCAAGATTCCGCGTGGCGCCATCTTGTCTGGCCCGCCCGGTACTGGTAAGACGCTG 21767
Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCGCAA-- 175393
|||||| || | ||| ||||| || || || ||| || |||| || || ||
Sbjct 21766 CTCGCCAAGGCGACCGCCGGTGAGTCGGGCGTGCCGTTCTTC-AGTG-TCAGCGGCTCCG 21709
Query 175394 ACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCG 175453
| || || ||||||||||| ||||| |||||| || || ||||| ||||||| |
Sbjct 21708 AATTCGTCGAGATGTTTGTCGGTGTCGGTGCCTCGAGAGTGCGCGACCTCTTTGCGCAGG 21649
Query 175454 CCCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGC 175499
|||| | || || || || ||||||||||| |||||||||||
Sbjct 21648 CCCGGAAGAACGCGCCCTGCATCGTCTTCATTGACGAGATTGATGC 21603
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596552314395840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |