Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryphonectria_20radicalis_20[genbank_20GCA_5F002179595.1_202017-06-
08] 2,318 sequences; 41,022,676 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq1543 116 3e-21
seq757 98.7 9e-16
>seq1543
Length=161075
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || ||||| || || || || ||||| || || | |
Sbjct 71712 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTCGAGGTCGAGTCTTCG 71653
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| ||| | || | || || ||||| || ||||| || || || || || || ||
Sbjct 71652 GATACAATTGACAACGTGAAGGCCAAGATTCAGGACAAGGAGGGTATCCCACCAGACCAG 71593
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT-TCGAGAAACATGTCAGATTATAA 24882
|| ||| | ||||| || || || |||||||||||| | || || | ||||| || ||
Sbjct 71592 CAGCGTCTCATCTTCGCGGGCAAGCAGCTGGAGGATGGCCGGACAC-TCTCAGACTACAA 71534
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|||||| ||||| ||||| || ||||||||| |||| |||| || ||
Sbjct 71533 CATTCAGAAGGAGTCGACGCTGCACTTGGTGCTGCGTCTGCGTGGTGG 71486
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || ||||| ||||| || || || || ||||| || || || ||
Sbjct 71940 ATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCC 71881
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||| || ||||| || || || || || || ||
Sbjct 71880 GACACCATCGACAACGTGAAGGCCAAGATTCAGGACAAGGAGGGTATCCCCCCAGACCAG 71821
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || | |||||||| || || ||||| ||||| | | | | || || || |||
Sbjct 71820 CAGCGCCTCATCTTTGCTGGAAAGCAGCTCGAGGACGGCCGTACCCTCTCCGACTACAAC 71761
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || ||||| || || || ||| | || | || | ||||| |||
Sbjct 71760 ATCCAGAAGGAGTCTACTCTCCACCTCGTCCTTCGCCTCCGCGGTGGC 71713
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | || || || ||||| || || || || || || || || || |
Sbjct 72169 GATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTCGAGTCCTC 72110
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|||||| | || | || || ||||| || ||||| || || || ||||| || ||
Sbjct 72109 CGACACCATCGACAACGTGAAGGCCAAGATTCAGGACAAGGAGGGCATCCCTCCTGACCA 72050
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| || |||| || ||||| || ||||| ||||| | | | | || || || ||
Sbjct 72049 GCAGCGCCTGATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAA 71990
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||| || ||||| || || || ||| |||| | || |||| || ||
Sbjct 71989 CATCCAGAAGGAGTCCACCCTTCACCTGGTCCTCCGTCTGCGTGGCGG 71942
>seq757
Length=325751
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || || || || ||||| || || || || || | ||
Sbjct 29834 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCATCC 29893
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || || ||||| ||||| || || || || || || ||
Sbjct 29894 GACACCATCGACAATGTCAAGGCCAAAATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 29953
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || |||||||||| || || ||||| ||||| | | | |||| || || |||
Sbjct 29954 CAGCGCCTGATCTTTGCTGGCAAGCAGCTCGAGGACGGCCGCACCCTGTCCGACTACAAC 30013
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||| ||||| || || || ||| |||| |||| |||| || ||
Sbjct 30014 ATTCAGAAGGAGTCCACCCTGCACCTGGTCCTGCGCCTGCGTGGTGG 30060
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449884564217040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |