Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryphonectria_20radicalis_20[genbank_20GCA_5F002179595.1_202017-06- 08] 2,318 sequences; 41,022,676 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq502 143 2e-29 seq1543 82.4 6e-11 >seq502 Length=109863 Score = 143 bits (158), Expect = 2e-29 Identities = 202/284 (71%), Gaps = 0/284 (0%) Strand=Plus/Plus Query 34321 GTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGG 34380 ||||| ||||| | || | | | |||| |||||||| |||||| || || ||| Sbjct 30361 GTCTCGGGGTTCTTGCACTTCTGGCACAGGACAAACTTCTTGATGAAGATGTCGAGGAGG 30420 Query 34381 TCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCG 34440 ||||| | ||| | || ||||| | ||||||| ||| | || || | ||| ||| Sbjct 30421 TCCTGGAGCTTGGCCGACTCGTGCGCACCGTTGATGATCCAGCGGTCATCCTTGGGGTCG 30480 Query 34441 ACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGT 34500 | | || || ||||| |||||| | |||||| |||| || |||| | | || || Sbjct 30481 ATGTTGGTCTGGGCGCCGAGCTCGAAGCCGAAGAACTTGATCAGGTAGGCGCCGGGGCGA 30540 Query 34501 CCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTT 34560 | |||| || ||||| || || |||||||| ||| |||||||| ||||||||||| Sbjct 30541 TCGAGCGACTGGGCGACGCTGGTCAGGTTGACGACGACGGTCTTGATACCGTTGCCCTTG 30600 Query 34561 CCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAA 34604 ||||||||||||| || |||| ||| |||||||| ||||| Sbjct 30601 CCTTCGACCTTGGTCTGGAGGCGCTCCATCTTGTAGCGATAGAA 30644 >seq1543 Length=161075 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || || ||||| || | |||||||| ||||| || |||| ||| || Sbjct 71712 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTCGAGGTCGAGTCTTCG 71653 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| | | | | || || |||||| ||||| || || | || || || Sbjct 71652 GATACAATTGACAACGTGAAGGCCAAGATTCAGGACAAGGAGGGTATCCCACCAGACCAG 71593 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || | || || | ||||| || ||||||||||||| | | ||| | | || |||||| Sbjct 71592 CAGCGTCTCATCTTCGCGGGCAAGCAGCTGGAGGATGGCCGGACACTCTCAGACTACAAC 71533 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGA 110500 ||||| || || || ||| ||||| ||||| | | ||||| || ||| Sbjct 71532 ATTCAGAAGGAGTCGACGCTGCACTTGGTGCTGCGTCTGCGTGGTGGA 71485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412829936966774