Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryphonectria_20radicalis_20[genbank_20GCA_5F002179595.1_202017-06- 08] 2,318 sequences; 41,022,676 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq757 152 3e-32 seq1543 143 2e-29 seq1759 95.1 8e-15 >seq757 Length=325751 Score = 152 bits (168), Expect = 3e-32 Identities = 167/220 (76%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 |||||||||||| | |||| ||||||||||||||| ||||| || ||| |||| | || Sbjct 30046 CAGGACCAGGTGCAGGGTGGACTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGGCCGTC 29987 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| || || |||||||| || ||||||||| | || | ||||||||||| Sbjct 29986 CTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTC 29927 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTA 34940 | ||||| ||||| || | ||||| || | ||| || |||| ||| | Sbjct 29926 CTGGATTTTGGCCTTGAC--AT--TGTCGATGGTGTCGGATGACTCCACCTCAAGGGTGA 29871 Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 | ||||| |||||||||||||| || |||||||||||||| Sbjct 29870 TAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGAT 29831 >seq1543 Length=161075 Score = 143 bits (158), Expect = 2e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||||| |||| ||||||||| ||||| ||||| || ||| |||| | || Sbjct 71957 AGGACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 72016 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| |||||||| ||||| || |||||||| | || | ||||||||||| Sbjct 72017 TCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCC 72076 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | || | || || |||||| |||| || |||||| Sbjct 72077 TGAATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGGACTCGACCTCAAGAGTGATGGTC 72136 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||||||||| || ||||||||||| Sbjct 72137 TTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 72168 Score = 120 bits (132), Expect = 2e-22 Identities = 155/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| |||| ||| | || ||||||||||||||| ||||| || || | || |||| Sbjct 71500 CAGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCTGAGAGTGTCCGGCCATC 71559 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| ||||| || |||||||| || || ||||||||| | || | ||||||||||| Sbjct 71560 CTCCAGCTGCTTGCCCGCGAAGATGAGACGCTGCTGGTCTGGTGGGATACCCTCCTTGTC 71619 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || || ||| | || | || | |||||| || | || ||||| Sbjct 71620 CTGAATCTTGGCCTTCACGTTGTCAATTGTATCCGAAGACTCGACCTCGAGAGTGATGGT 71679 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||| || ||||||||||| || |||||||||||| Sbjct 71680 CTTGCCGGTGAGGGTCTTGACGAAGATCTGCATG 71713 Score = 116 bits (128), Expect = 2e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | || ||||||||| ||||| ||||| || ||| | || | || Sbjct 71729 AGGACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCGTCC 71788 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || |||||||| || ||||| || || ||||||||| | || | ||||||||||| Sbjct 71789 TCGAGCTGCTTTCCAGCAAAGATGAGGCGCTGCTGGTCTGGGGGGATACCCTCCTTGTCC 71848 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | || | || || |||||| || | ||| |||||| Sbjct 71849 TGAATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTC 71908 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||| ||||| || ||||||||||| Sbjct 71909 TTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 71940 >seq1759 Length=81252 Score = 95.1 bits (104), Expect = 8e-15 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 ||||||| ||||| ||||| || || |||| |||| || || ||||| |||||||||| Sbjct 66845 CCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGA 66904 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 ||| ||| |||||||| | || | ||||||||||| | || || || ||| Sbjct 66905 TCAATCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTAACGTTGT 66964 Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967 | || | || | ||| || || | ||| || ||||| ||||| |||||||| || | Sbjct 66965 CGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGA 67024 Query 34968 AG 34969 || Sbjct 67025 AG 67026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325683598974842