Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryphonectria_20radicalis_20[genbank_20GCA_5F002179595.1_202017-06- 08] 2,318 sequences; 41,022,676 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq447 87.8 7e-12 >seq447 Length=327381 Score = 87.8 bits (96), Expect = 7e-12 Identities = 119/163 (73%), Gaps = 5/163 (3%) Strand=Plus/Plus Query 309684 CTCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTC 309743 ||| ||||| | || || ||||||||||| |||||||| | |||||||||| || || Sbjct 18199 CTCAATCAAATGAGCAATGGTCATACGAGACGGAATGGCGTGCGGGTTGATGATGATATC 18258 Query 309744 AGGTCTCATTCCGGTGATTGGGTTGAAAGGCATATCTTCTT-CAGGTACAATCAAACCAA 309802 || | || || | || | |||||||| || || | | |||| | | ||||| Sbjct 18259 GGGCGTGATACCCTC---TCGGGTAAAAGGCATGTCCTCCTGCCGGTAGG-TGACACCAA 18314 Query 309803 TAGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAAT 309845 |||| ||||| || |||| | ||| ||||||||||||||||| Sbjct 18315 TAGTGCCCTTCTGGCCGTGGCGGGAGGCAAACTTGTCACCAAT 18357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951916427580304