Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryphonectria_20radicalis_20[genbank_20GCA_5F002179595.1_202017-06-
08] 2,318 sequences; 41,022,676 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq813 201 1e-46
>seq813
Length=186750
Score = 201 bits (222), Expect = 1e-46
Identities = 450/680 (66%), Gaps = 52/680 (8%)
Strand=Plus/Plus
Query 146872 ATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACG 146931
|||| |||| ||| ||| || || | ||| ||||||| | | || | || |||
Sbjct 155350 ATCTCCAGCTCGGGAAAGTCGCGCGGCTCCCTCTCCAGCTGTGTCCTGAGCGCGTCGACG 155409
Query 146932 TGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCG 146991
|||| | |||||| |||||||| |||| | |||| | | |||||| || |
Sbjct 155410 TGGTCCACGTAGACATGCGCGTCGCCCATGACGTGCGTCAGGCTGCCCGGCACGAGATCA 155469
Query 146992 GTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCC 147051
|||||| || | ||||| || ||||||| ||||||||| |||||||| || || ||
Sbjct 155470 CACACGTGCGCGATCATGTGTGTCAGCAGCGCGTAGCTGGCGATGTTGAACGGCACGCCG 155529
Query 147052 AGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCA------------------------- 147086
||||||||||| | |||| |||||||||||||||
Sbjct 155530 AGGCCCATGTCGCAGGACCGCTGGTACAGCTGGCAGTGCAGGTGGCCCTTGGGCTTCGCC 155589
Query 147087 -CGAGA-----GCT------CCCCGTCGGCC-----------ACGTAAAACTG-GCACAG 147122
|| | ||| ||||| ||||| ||||| ||||| ||| |
Sbjct 155590 TCGCCATCCCCGCTGTCCTGCCCCGCCGGCCGTGGATACGATACGTAGAACTGCGCAAAC 155649
Query 147123 GATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCAC 147182
||||| || ||||||||||||||| |||||| ||||||||| || | |
Sbjct 155650 -ATGTGACAGGGCGGCAGCGCCATGATCTTCAGGTCTTTGGGGTTCCACGCGCTCATGAT 155708
Query 147183 CAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAACCCACCTCAGCTGGTCCAC 147242
| |||| | | |||||| || | | || | || ||| | ||||||||| ||
Sbjct 155709 GATGCGCCGGTCGTACGGGTTCGTCCTGAGCTTGTGTATGACCTCCGCCAGCTGGTCGAC 155768
Query 147243 GCCCTGGCCCCCGTAGTTTGTCC-CGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACT 147301
|||||||||| ||||| |||| ||| |||||||||| |||||||||||| | |||||
Sbjct 155769 GCCCTGGCCCGTGTAGTCCGTCCTCGC-GTCCACGTACTCGGCCCCAAAGTGGCGCCACT 155827
Query 147302 GGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCCGCCCGCTTGA 147361
||||||||||||| || || |||||||| || | |||||||| |||| | | | |
Sbjct 155828 GGAAGCCGTACACGGGGCCGAGGTCGCCCACCTCGCGGTGCGAGAGGCCCACGCCGTCCA 155887
Query 147362 GAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAG 147421
| |||||| | ||||||| | |||||||||| || |||| || ||| | |
Sbjct 155888 GGAACTCGCGCGACCCGTTGCCGTCCCAGATCTTGACGCCCTGCTCGCTGAGGGACAGGG 155947
Query 147422 AGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCC 147481
| ||| | |||| || ||||||||| ||||| | | ||| || | || || |
Sbjct 155948 ACGACGTCGCGCCCGAGACGAACCAGAGGAGCTCGGCGAGGACCGCCTTGTGGAACACGC 156007
Query 147482 TCTTGGTGGTCAGCAGGGGG 147501
||||||||| || || |||
Sbjct 156008 GCTTGGTGGTGAGGAGCGGG 156027
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583471093435200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |