Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryphonectria_20radicalis_20[genbank_20GCA_5F002179595.1_202017-06- 08] 2,318 sequences; 41,022,676 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq813 201 1e-46 >seq813 Length=186750 Score = 201 bits (222), Expect = 1e-46 Identities = 450/680 (66%), Gaps = 52/680 (8%) Strand=Plus/Plus Query 146872 ATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACG 146931 |||| |||| ||| ||| || || | ||| ||||||| | | || | || ||| Sbjct 155350 ATCTCCAGCTCGGGAAAGTCGCGCGGCTCCCTCTCCAGCTGTGTCCTGAGCGCGTCGACG 155409 Query 146932 TGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCG 146991 |||| | |||||| |||||||| |||| | |||| | | |||||| || | Sbjct 155410 TGGTCCACGTAGACATGCGCGTCGCCCATGACGTGCGTCAGGCTGCCCGGCACGAGATCA 155469 Query 146992 GTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCC 147051 |||||| || | ||||| || ||||||| ||||||||| |||||||| || || || Sbjct 155470 CACACGTGCGCGATCATGTGTGTCAGCAGCGCGTAGCTGGCGATGTTGAACGGCACGCCG 155529 Query 147052 AGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCA------------------------- 147086 ||||||||||| | |||| ||||||||||||||| Sbjct 155530 AGGCCCATGTCGCAGGACCGCTGGTACAGCTGGCAGTGCAGGTGGCCCTTGGGCTTCGCC 155589 Query 147087 -CGAGA-----GCT------CCCCGTCGGCC-----------ACGTAAAACTG-GCACAG 147122 || | ||| ||||| ||||| ||||| ||||| ||| | Sbjct 155590 TCGCCATCCCCGCTGTCCTGCCCCGCCGGCCGTGGATACGATACGTAGAACTGCGCAAAC 155649 Query 147123 GATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCAC 147182 ||||| || ||||||||||||||| |||||| ||||||||| || | | Sbjct 155650 -ATGTGACAGGGCGGCAGCGCCATGATCTTCAGGTCTTTGGGGTTCCACGCGCTCATGAT 155708 Query 147183 CAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAACCCACCTCAGCTGGTCCAC 147242 | |||| | | |||||| || | | || | || ||| | ||||||||| || Sbjct 155709 GATGCGCCGGTCGTACGGGTTCGTCCTGAGCTTGTGTATGACCTCCGCCAGCTGGTCGAC 155768 Query 147243 GCCCTGGCCCCCGTAGTTTGTCC-CGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACT 147301 |||||||||| ||||| |||| ||| |||||||||| |||||||||||| | ||||| Sbjct 155769 GCCCTGGCCCGTGTAGTCCGTCCTCGC-GTCCACGTACTCGGCCCCAAAGTGGCGCCACT 155827 Query 147302 GGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCCGCCCGCTTGA 147361 ||||||||||||| || || |||||||| || | |||||||| |||| | | | | Sbjct 155828 GGAAGCCGTACACGGGGCCGAGGTCGCCCACCTCGCGGTGCGAGAGGCCCACGCCGTCCA 155887 Query 147362 GAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAG 147421 | |||||| | ||||||| | |||||||||| || |||| || ||| | | Sbjct 155888 GGAACTCGCGCGACCCGTTGCCGTCCCAGATCTTGACGCCCTGCTCGCTGAGGGACAGGG 155947 Query 147422 AGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCC 147481 | ||| | |||| || ||||||||| ||||| | | ||| || | || || | Sbjct 155948 ACGACGTCGCGCCCGAGACGAACCAGAGGAGCTCGGCGAGGACCGCCTTGTGGAACACGC 156007 Query 147482 TCTTGGTGGTCAGCAGGGGG 147501 ||||||||| || || ||| Sbjct 156008 GCTTGGTGGTGAGGAGCGGG 156027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583471093435200