Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryphonectria_20radicalis_20[genbank_20GCA_5F002179595.1_202017-06- 08] 2,318 sequences; 41,022,676 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq1567 98.7 1e-15 >seq1567 Length=91444 Score = 98.7 bits (108), Expect = 1e-15 Identities = 153/218 (70%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 39608 AACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAA 39667 |||| | ||||||||||||| |||||| ||||| || | | || | ||||| || Sbjct 45315 AACAGCAGGCAGGCGAAGTCAGTATGTAGACCCTCGTCACGAGAGATCAGCTCGTTGGAG 45256 Query 39668 AATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCA 39727 || || || |||||||| || |||||||| |||||||| || |||| || || | || Sbjct 45255 AAGGTCAGACCAGGCATCAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCGCCG 45196 Query 39728 GAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATC- 39786 |||||||| || || || || || ||||| ||||| | || |||| | | || Sbjct 45195 CTGAAGAAGATACCCTCGACGGCAGCGAATGCGACAAGGCGCTGCGCGTAGGTGGACTCC 45136 Query 39787 --ATTATGTATCCACTTCTGTGCCCAATCAGCTTTCTT 39822 | || |||||| || | ||||| || || ||||| Sbjct 45135 CGGTCCTGGATCCACCTCAGAGCCCAGTCGGCCTTCTT 45098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686888896817520