Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryphonectria_20radicalis_20[genbank_20GCA_5F002179595.1_202017-06-
08] 2,318 sequences; 41,022,676 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq1567 120 1e-21
seq1933 104 7e-17
>seq1567
Length=91444
Score = 120 bits (132), Expect = 1e-21
Identities = 124/161 (77%), Gaps = 1/161 (1%)
Strand=Plus/Plus
Query 443707 AGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCC 443766
|||| || ||||| || |||| ||||| || | || || |||||| || || ||||||
Sbjct 45153 AGCGCCTTGTCGCATTCGCTGCCGTCGAGGGTATCTTCTTCAGCGGC-GCCTTCGCCTCC 45211
Query 443767 ATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATC 443826
||||||||| | || |||||||| || |||| ||||||||||| ||||| ||||||
Sbjct 45212 ATCTTCTGGCTCAAGAAGCGTGGCCTGATGCCTGGTCTGACCTTCTCCAACGAGCTGATC 45271
Query 443827 AGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867
||| ||||||||| | ||| ||||||||||| || ||
Sbjct 45272 TCTCGTGACGAGGGTCTACATACTGACTTCGCCTGCCTGCT 45312
>seq1933
Length=42650
Score = 104 bits (114), Expect = 7e-17
Identities = 89/110 (81%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 254972 GGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGC 255031
||||| || || ||| | ||||| ||||||||| |||||||||||||| || || |||
Sbjct 26735 GGCATCATCCCCATGCTGCGTGTCTTCAACAACACTGCTCGCTACGTCGACCAGGGTGGC 26676
Query 255032 GGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGA 255081
||| ||||| || || || ||||||||||||||||||||||||| ||
Sbjct 26675 AACAAGCGCCCCGGTGCCTTTGCCATCTACCTGGAGCCGTGGCACGCTGA 26626
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588288827413510
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |