Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryphonectria_20radicalis_20[genbank_20GCA_5F002179595.1_202017-06- 08] 2,318 sequences; 41,022,676 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq1567 120 1e-21 seq1933 104 7e-17 >seq1567 Length=91444 Score = 120 bits (132), Expect = 1e-21 Identities = 124/161 (77%), Gaps = 1/161 (1%) Strand=Plus/Plus Query 443707 AGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCC 443766 |||| || ||||| || |||| ||||| || | || || |||||| || || |||||| Sbjct 45153 AGCGCCTTGTCGCATTCGCTGCCGTCGAGGGTATCTTCTTCAGCGGC-GCCTTCGCCTCC 45211 Query 443767 ATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATC 443826 ||||||||| | || |||||||| || |||| ||||||||||| ||||| |||||| Sbjct 45212 ATCTTCTGGCTCAAGAAGCGTGGCCTGATGCCTGGTCTGACCTTCTCCAACGAGCTGATC 45271 Query 443827 AGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867 ||| ||||||||| | ||| ||||||||||| || || Sbjct 45272 TCTCGTGACGAGGGTCTACATACTGACTTCGCCTGCCTGCT 45312 >seq1933 Length=42650 Score = 104 bits (114), Expect = 7e-17 Identities = 89/110 (81%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 254972 GGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGC 255031 ||||| || || ||| | ||||| ||||||||| |||||||||||||| || || ||| Sbjct 26735 GGCATCATCCCCATGCTGCGTGTCTTCAACAACACTGCTCGCTACGTCGACCAGGGTGGC 26676 Query 255032 GGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGA 255081 ||| ||||| || || || ||||||||||||||||||||||||| || Sbjct 26675 AACAAGCGCCCCGGTGCCTTTGCCATCTACCTGGAGCCGTGGCACGCTGA 26626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588288827413510