Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryphonectria_20radicalis_20[genbank_20GCA_5F002179595.1_202017-06- 08] 2,318 sequences; 41,022,676 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq813 187 2e-42 >seq813 Length=186750 Score = 187 bits (206), Expect = 2e-42 Identities = 439/670 (66%), Gaps = 56/670 (8%) Strand=Plus/Plus Query 27105 GGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTA 27164 ||||||| | ||||||||||| ||||| ||| | |||| || ||||| |||| ||| Sbjct 155361 GGGAAAGTCGCGCGGCTCCCTCTCCAGCTGTGTCCTGAGCGCGTCGACGTGGTCCACGTA 155420 Query 27165 GACGTGAGCGTCTCCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAG 27223 ||| || ||||| |||| | ||| | || || ||||| | || | ||||| | Sbjct 155421 GACATGCGCGTCGCCCATGACGTGCGTCAGGCTG-CCCGGCACGAGATCACACACGTGCG 155479 Query 27224 CCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGT 27283 | ||||||| || || || | ||||||||||||||| || || || ||||| ||||||| Sbjct 155480 CGATCATGTGTGTCAGCAGCGCGTAGCTGGCGATGTTGAACGGCACGCCGAGGCCCATGT 155539 Query 27284 CCCCCGACCTCTGGTAGAGCTGACACGAGAG------------------CTCTCCATC-- 27323 | | |||| |||||| ||||| || || ||| ||||| Sbjct 155540 CGCAGGACCGCTGGTACAGCTGGCAGTGCAGGTGGCCCTTGGGCTTCGCCTCGCCATCCC 155599 Query 27324 -GCT---------------------------TACGTAAAACTG---ACATATGGCGTGGC 27352 ||| |||||| ||||| | | ||| || | Sbjct 155600 CGCTGTCCTGCCCCGCCGGCCGTGGATACGATACGTAGAACTGCGCAAACATG---TGAC 155656 Query 27353 ACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCC 27412 | || || || ||||||| || ||||||||||||||| |||| || ||||||||||| Sbjct 155657 AGGGCGGCAGCGCCATGATCTTCAGGTCTTTGGGGTTCCACGCGCTCATGATGATGCGCC 155716 Query 27413 TGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCC 27472 ||| | ||||| |||||| || | | | | |||||| || || ||| | Sbjct 155717 GGTCGTACGGGTTCGTCCTGAGCTTGTGTATGACCTCCGCCAGCTGGTCGACGCCCTGGC 155776 Query 27473 CCGAGTAGTCTACCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGT 27532 ||| |||||| |||| |||| |||||| || || || || | ||| ||||| |||| Sbjct 155777 CCGTGTAGTCCGTCCTCGCGTCCACGTACTCGGCCCCAAAGTGGCGCCACTGGAAGCCGT 155836 Query 27533 ACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTC 27592 |||| || || ||||| ||| | || | |||| || |||| ||||| || || | Sbjct 155837 ACACGGGGCCGAGGTCGCCCACCTCGCGGTGCGAGAGGCCCACGCCGTCCAGGAACTCGC 155896 Query 27593 TGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGG 27652 || |||||| ||||||||||||| || |||| |||| ||| ||| || | Sbjct 155897 GCGACCCGTTGCCGTCCCAGATCTTGACGCCCTGCTCGCTGAGGGACAGGGACGACGTCG 155956 Query 27653 ACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCG 27712 || ||||||||| || ||||| | | ||| ||||| || || | |||||| | Sbjct 155957 CGCCCGAGACGAACCAGAGGAGCTCGGCGAGGACCGCCTTGTGGAACACGCGCTTGGTGG 156016 Query 27713 TGAGGAGGGG 27722 ||||||| || Sbjct 156017 TGAGGAGCGG 156026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369496761190658