Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01- 12] 374 sequences; 33,379,470 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq290 96.9 3e-15 >seq290 Length=256071 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | ||||| ||| |||||||| |||||||| ||||| | | Sbjct 202693 CCACCACGGAGGCGGAGGACGAGATGCAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAC 202634 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | ||||| ||||| ||||| || |||| || | ||||||||| || Sbjct 202633 AGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCTGGAGGA 202574 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| ||||||| || || | | ||| || || | ||| Sbjct 202573 ATGCCCTCCTTGTCCTGGATCTTTGTCTTGACGTTGTCGATCGTGTCGGATGACTCAACC 202514 Query 21129 TCCACGGTAATGGTCTTGCCGGT 21151 || | || |||||||||||||| Sbjct 202513 TCGAGTGTGATGGTCTTGCCGGT 202491 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||||| || | ||||||||||| || ||||| ||||||| Sbjct 203149 CCGCCACGAAGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAG 203090 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | | ||||| || || || || ||| | || || | |||||||||| || Sbjct 203089 AGCGTCCTGCCATCCTCGAGTTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGAGGG 203030 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| ||||| | | | | ||||| | | ||| Sbjct 203029 ATACCCTCCTTGTCCTGGATCTTGGTCTTCACGTTGTCAATGGTATCGCTCGATTCCACC 202970 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || || ||||||||||| | || || || || |||||||| Sbjct 202969 TCCAATGTGATTGTCTTGCCGGTAAGGGTCTTCACGAAGATTTGCAT 202923 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| || | ||||| |||||||||||||| ||||| | | Sbjct 202410 CCACCACGGAGGCGGAGGACCAGGTGGAGGGTGGATTCCTTTTGAATGTTGTAGTCGGAC 202351 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | |||| || ||||| ||||| ||| | || | | ||||||||| ||| Sbjct 202350 AGGGTGCGACCGTCTTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCTGGGGGA 202291 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| ||||| || || | | ||| ||| || || ||| Sbjct 202290 ATACCCTCCTTGTCCTGAATCTTGGTCTTGACATTGTCGATAGTGTCGGAGGACTCGACC 202231 Query 21129 TCCACGGTAATGGTCTTGCCGGT 21151 || | || |||||||||||||| Sbjct 202230 TCGAGCGTGATGGTCTTGCCGGT 202208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422257275289784