Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01-
12] 374 sequences; 33,379,470 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq154 284 1e-71
seq290 111 2e-19
seq273 109 6e-19
seq143 105 7e-18
>seq154
Length=40832
Score = 284 bits (314), Expect = 1e-71
Identities = 578/854 (68%), Gaps = 66/854 (8%)
Strand=Plus/Plus
Query 116639 TGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCC 116698
|||| |||||||| ||||||||||| || |||||||||| ||||||| | || || |||
Sbjct 12892 TGGCAAATGTACAAGAAGGCCGAGGC-TCTTTCTGGACCGCCGAGGAGATTGATCTCTCC 12950
Query 116699 AAGGACACGAGCGACTGGGA---GCGCTTGAACGACAACGAGCGCCATTTCATCAAGCAC 116755
||||| ||||||| | |||| |||||||| |||||||| ||||||| |||
Sbjct 12951 AAGGATCTTCACGACTGGAACAAGCGCCTGAACGACGACGAGCGCTTTTTCATCTCCCAC 13010
Query 116756 GTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTC 116815
|| || ||||| || |||||| ||| ||||||||||||||||| |||||||||||||||
Sbjct 13011 GTCCTCGCCTTCTTTGCCGCCTCCGATGGCATCGTCAACGAGAACCTGGTCGAGCGTTTC 13070
Query 116816 GCTCAG-GAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGA 116874
| ||| || || ||| | |||||||||| |||||||||||||| |||||| |||||
Sbjct 13071 TC-CAGCGAAGTACAGATACCCGAGGCGCGTTGCTTCTACGGCTTCCAGATCATGATGGA 13129
Query 116875 GAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT--GCGCTCTTCGG-A 116931
|||||| ||||| || | || || ||||||||||| ||| | ||| | | || |
Sbjct 13130 GAACGTCCACTCTGAGACTTACTCTCTGCTCATCGACACCTACATTAGCGAGCCTAGGCA 13189
Query 116932 GGAGAAGCTCCGTTTGTTGAACGCCATCGA----------------GACGATGC------ 116969
| || || |||| ||||| ||||| || | ||
Sbjct 13190 GCGCCAGTACC---TGTTCAACGCTATCGACAACAGTAAGTTACCCCACAACGCGCTTCA 13246
Query 116970 -------CGT-----GCGTCAAAG---------------AGAAGGCCGAGTGGGCGCTGC 117002
||| |||||| || |||||||||| ||||| ||||
Sbjct 13247 ATTTACGCGTCTAACGCGTCATAGTTCCCTGCATCCGCAAGAAGGCCGACTGGGCCCTGC 13306
Query 117003 GCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCG 117062
| |||||| | | || | || | |||| | || || || || ||||| || || |
Sbjct 13307 GATGGATCTCGGACAAGAACTCCACTTTCGCCAGCCGTCTTGTCGCGTTCGCTGCTGTTG 13366
Query 117063 AGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCA 117122
|||| |||||||| || ||||| |||| || ||| | ||||| || ||||| |
Sbjct 13367 AGGGTATCTTCTTTAGCGGTTCGTTCGCATCCATCTTCTGGTTGAAGAAGCGTGGCCTAA 13426
Query 117123 TGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACT 117182
|||| ||||| || ||| ||||||||||||||| | || ||||| |||| ||||
Sbjct 13427 TGCCTGGCCTTACCTTCTCCAACGAGCTCATCTCTCGTGATGAGGGCATGCACACTGACT 13486
Query 117183 TTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCGCGCGTCAGGGAGA 117242
| ||||| |||| ||| | | | || || ||| || | |||| | |
Sbjct 13487 TCGCCTGCCTGCTCTTCTCTCTTCTCAACACCCGCCCCAGCAAGGAGGCCGTCCAAGCCA 13546
Query 117243 TCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTG-CCGGTGCGT 117301
|| ||||||| || || || ||||| ||||||| ||| || ||| || |||| |
Sbjct 13547 TCATCACCGAGGCTGTTCAGATTGAGCAAGAGTTCCTCAGCGACGCTCTGCCCTGTGC-T 13605
Query 117302 CTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGTTCGTCGCCGACAGGCT 117360
||||| || | || || || | |||| || ||||| ||||| ||||| || | ||
Sbjct 13606 CTGCTCGGCATGAA-CGCCAAGCTCATGTGCCAGTACATTGAGTTTGTCGCTGATCGTCT 13664
Query 117361 GCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCGCTGGACTTTATGAA 117420
|||||||| ||| | | ||||| ||| || | ||||||| | ||||| ||| |
Sbjct 13665 GCTGCTCGCATTGGGCAACACCAAGGTTTACCACGCCACCAACCCCTTTGACTTCATGGA 13724
Query 117421 CCTCATCTC-CTTG 117433
|||||| ||||
Sbjct 13725 GAACATCTCGCTTG 13738
>seq290
Length=256071
Score = 111 bits (122), Expect = 2e-19
Identities = 139/188 (74%), Gaps = 2/188 (1%)
Strand=Plus/Plus
Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAG 40770
|||| ||||| |||||||| |||| || || | |||||| | | |||| |||||
Sbjct 202489 TCACCGGCAAGACCATCACACTCGAGGTTGAGTCATCCGACACGATCGACAACG-TCAAG 202547
Query 40771 GAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGC 40830
||| || | ||||| |||||||| || | |||||||| || || || | ||| |||
Sbjct 202548 ACAAAGATCCAGGACAAGGAGGGCATTCCTCCAGACCAGCAGCGCCTGATTTTCGCCGGC 202607
Query 40831 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTG 40890
|| ||||| || || | ||||| || |||||||||||| ||||||||| | || |||
Sbjct 202608 AAGCAGCTCGAGGATGGCCGCACTCTGTCCGACTACAACATTCAGAAGGAGTCTACTCTG 202667
Query 40891 CATCTAGT 40898
||||| ||
Sbjct 202668 CATCTCGT 202675
Score = 109 bits (120), Expect = 6e-19
Identities = 148/204 (73%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || | || || || |||||||| | || ||||| | |
Sbjct 202695 ATGCAGATCTTCGTCAAGACATTGACTGGAAAGACCATCACTCTTGAGGTCGAGTCTTCG 202754
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | | |||| |||||| || || | ||||| |||||||||||| | |||||
Sbjct 202755 GATACTATTGACAACG-TCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCA 202813
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || ||||| | ||| || || ||| |||| |||| || || ||| ||||||||
Sbjct 202814 GCAGCGTCTCATTTTCGCTGGTAAGCAGTTGGAAGACGGCCGTACTCTCTCGGACTACAA 202873
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
||||||||||||| | || || ||
Sbjct 202874 CATCCAGAAGGAGTCAACTCTTCA 202897
Score = 107 bits (118), Expect = 2e-18
Identities = 136/187 (73%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGG 40771
|||| ||||| |||||||| |||| ||||| || |||||| | | | |||||
Sbjct 202206 TCACCGGCAAGACCATCACGCTCGAGGTCGAGTCCTCCGACACTATCGACAATGTCAAGA 202265
Query 40772 AAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCA 40831
|| |||| ||||| ||||| || ||| | |||||||| || | |||| || ||||
Sbjct 202266 CCAAGATTCAGGACAAGGAGGGTATTCCCCCAGACCAGCAGCGCTTGATCTTTGCCGGCA 202325
Query 40832 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGC 40891
| ||||| || |||| |||||||| |||||||||||| || ||||| |||| || |
Sbjct 202326 AGCAGCTTGAAGACGGTCGCACCCTGTCCGACTACAACATTCAAAAGGAATCCACCCTCC 202385
Query 40892 ATCTAGT 40898
| || ||
Sbjct 202386 ACCTGGT 202392
Score = 104 bits (114), Expect = 2e-17
Identities = 147/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || || || ||||| || ||||| | || || ||| | | |
Sbjct 202923 ATGCAAATCTTCGTGAAGACCCTTACCGGCAAGACAATCACATTGGAGGTGGAATCGAGC 202982
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | | | |||| | ||| || || | ||||| ||||| ||||| |||||||
Sbjct 202983 GATACCATTGACAACG-TGAAGACCAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCA 203041
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || ||||||| || || || || || || || | | || ||| ||||||||
Sbjct 203042 GCAGCGTCTCATCTTTGCTGGTAAGCAACTCGAGGATGGCAGGACGCTCTCGGACTACAA 203101
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
||||||||||||| |||| || ||
Sbjct 203102 CATCCAGAAGGAGTCCACCCTCCA 203125
>seq273
Length=368666
Score = 109 bits (120), Expect = 6e-19
Identities = 90/110 (82%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842
||||| |||||||| ||| |||||||||| || ||||||| ||| ||||| ||||| ||
Sbjct 357240 GACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTTGAG 357181
Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892
|| | ||||| ||| |||||||||||||||||||||| | || || ||
Sbjct 357180 GATGGCCGCACTCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTCCA 357131
>seq143
Length=90640
Score = 105 bits (116), Expect = 7e-18
Identities = 93/116 (80%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842
||||| |||||||| ||| |||||||||| || ||||||| ||| || || ||||| ||
Sbjct 42997 GACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAG 43056
Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|| | |||||||| |||||||||||||||||||||| | || || || || ||
Sbjct 43057 GATGGTCGCACCCTTTCCGACTACAACATCCAGAAGGAGTCGACACTTCACCTCGT 43112
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515216791350240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |