Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01- 12] 374 sequences; 33,379,470 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq154 284 1e-71 seq290 111 2e-19 seq273 109 6e-19 seq143 105 7e-18 >seq154 Length=40832 Score = 284 bits (314), Expect = 1e-71 Identities = 578/854 (68%), Gaps = 66/854 (8%) Strand=Plus/Plus Query 116639 TGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCC 116698 |||| |||||||| ||||||||||| || |||||||||| ||||||| | || || ||| Sbjct 12892 TGGCAAATGTACAAGAAGGCCGAGGC-TCTTTCTGGACCGCCGAGGAGATTGATCTCTCC 12950 Query 116699 AAGGACACGAGCGACTGGGA---GCGCTTGAACGACAACGAGCGCCATTTCATCAAGCAC 116755 ||||| ||||||| | |||| |||||||| |||||||| ||||||| ||| Sbjct 12951 AAGGATCTTCACGACTGGAACAAGCGCCTGAACGACGACGAGCGCTTTTTCATCTCCCAC 13010 Query 116756 GTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTC 116815 || || ||||| || |||||| ||| ||||||||||||||||| ||||||||||||||| Sbjct 13011 GTCCTCGCCTTCTTTGCCGCCTCCGATGGCATCGTCAACGAGAACCTGGTCGAGCGTTTC 13070 Query 116816 GCTCAG-GAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGA 116874 | ||| || || ||| | |||||||||| |||||||||||||| |||||| ||||| Sbjct 13071 TC-CAGCGAAGTACAGATACCCGAGGCGCGTTGCTTCTACGGCTTCCAGATCATGATGGA 13129 Query 116875 GAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT--GCGCTCTTCGG-A 116931 |||||| ||||| || | || || ||||||||||| ||| | ||| | | || | Sbjct 13130 GAACGTCCACTCTGAGACTTACTCTCTGCTCATCGACACCTACATTAGCGAGCCTAGGCA 13189 Query 116932 GGAGAAGCTCCGTTTGTTGAACGCCATCGA----------------GACGATGC------ 116969 | || || |||| ||||| ||||| || | || Sbjct 13190 GCGCCAGTACC---TGTTCAACGCTATCGACAACAGTAAGTTACCCCACAACGCGCTTCA 13246 Query 116970 -------CGT-----GCGTCAAAG---------------AGAAGGCCGAGTGGGCGCTGC 117002 ||| |||||| || |||||||||| ||||| |||| Sbjct 13247 ATTTACGCGTCTAACGCGTCATAGTTCCCTGCATCCGCAAGAAGGCCGACTGGGCCCTGC 13306 Query 117003 GCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCG 117062 | |||||| | | || | || | |||| | || || || || ||||| || || | Sbjct 13307 GATGGATCTCGGACAAGAACTCCACTTTCGCCAGCCGTCTTGTCGCGTTCGCTGCTGTTG 13366 Query 117063 AGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCA 117122 |||| |||||||| || ||||| |||| || ||| | ||||| || ||||| | Sbjct 13367 AGGGTATCTTCTTTAGCGGTTCGTTCGCATCCATCTTCTGGTTGAAGAAGCGTGGCCTAA 13426 Query 117123 TGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACT 117182 |||| ||||| || ||| ||||||||||||||| | || ||||| |||| |||| Sbjct 13427 TGCCTGGCCTTACCTTCTCCAACGAGCTCATCTCTCGTGATGAGGGCATGCACACTGACT 13486 Query 117183 TTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCGCGCGTCAGGGAGA 117242 | ||||| |||| ||| | | | || || ||| || | |||| | | Sbjct 13487 TCGCCTGCCTGCTCTTCTCTCTTCTCAACACCCGCCCCAGCAAGGAGGCCGTCCAAGCCA 13546 Query 117243 TCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTG-CCGGTGCGT 117301 || ||||||| || || || ||||| ||||||| ||| || ||| || |||| | Sbjct 13547 TCATCACCGAGGCTGTTCAGATTGAGCAAGAGTTCCTCAGCGACGCTCTGCCCTGTGC-T 13605 Query 117302 CTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGTTCGTCGCCGACAGGCT 117360 ||||| || | || || || | |||| || ||||| ||||| ||||| || | || Sbjct 13606 CTGCTCGGCATGAA-CGCCAAGCTCATGTGCCAGTACATTGAGTTTGTCGCTGATCGTCT 13664 Query 117361 GCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCGCTGGACTTTATGAA 117420 |||||||| ||| | | ||||| ||| || | ||||||| | ||||| ||| | Sbjct 13665 GCTGCTCGCATTGGGCAACACCAAGGTTTACCACGCCACCAACCCCTTTGACTTCATGGA 13724 Query 117421 CCTCATCTC-CTTG 117433 |||||| |||| Sbjct 13725 GAACATCTCGCTTG 13738 >seq290 Length=256071 Score = 111 bits (122), Expect = 2e-19 Identities = 139/188 (74%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAG 40770 |||| ||||| |||||||| |||| || || | |||||| | | |||| ||||| Sbjct 202489 TCACCGGCAAGACCATCACACTCGAGGTTGAGTCATCCGACACGATCGACAACG-TCAAG 202547 Query 40771 GAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGC 40830 ||| || | ||||| |||||||| || | |||||||| || || || | ||| ||| Sbjct 202548 ACAAAGATCCAGGACAAGGAGGGCATTCCTCCAGACCAGCAGCGCCTGATTTTCGCCGGC 202607 Query 40831 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTG 40890 || ||||| || || | ||||| || |||||||||||| ||||||||| | || ||| Sbjct 202608 AAGCAGCTCGAGGATGGCCGCACTCTGTCCGACTACAACATTCAGAAGGAGTCTACTCTG 202667 Query 40891 CATCTAGT 40898 ||||| || Sbjct 202668 CATCTCGT 202675 Score = 109 bits (120), Expect = 6e-19 Identities = 148/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || || || |||||||| | || ||||| | | Sbjct 202695 ATGCAGATCTTCGTCAAGACATTGACTGGAAAGACCATCACTCTTGAGGTCGAGTCTTCG 202754 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | |||| |||||| || || | ||||| |||||||||||| | ||||| Sbjct 202755 GATACTATTGACAACG-TCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCA 202813 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||| | ||| || || ||| |||| |||| || || ||| |||||||| Sbjct 202814 GCAGCGTCTCATTTTCGCTGGTAAGCAGTTGGAAGACGGCCGTACTCTCTCGGACTACAA 202873 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| | || || || Sbjct 202874 CATCCAGAAGGAGTCAACTCTTCA 202897 Score = 107 bits (118), Expect = 2e-18 Identities = 136/187 (73%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGG 40771 |||| ||||| |||||||| |||| ||||| || |||||| | | | ||||| Sbjct 202206 TCACCGGCAAGACCATCACGCTCGAGGTCGAGTCCTCCGACACTATCGACAATGTCAAGA 202265 Query 40772 AAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCA 40831 || |||| ||||| ||||| || ||| | |||||||| || | |||| || |||| Sbjct 202266 CCAAGATTCAGGACAAGGAGGGTATTCCCCCAGACCAGCAGCGCTTGATCTTTGCCGGCA 202325 Query 40832 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGC 40891 | ||||| || |||| |||||||| |||||||||||| || ||||| |||| || | Sbjct 202326 AGCAGCTTGAAGACGGTCGCACCCTGTCCGACTACAACATTCAAAAGGAATCCACCCTCC 202385 Query 40892 ATCTAGT 40898 | || || Sbjct 202386 ACCTGGT 202392 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || ||||| || ||||| | || || ||| | | | Sbjct 202923 ATGCAAATCTTCGTGAAGACCCTTACCGGCAAGACAATCACATTGGAGGTGGAATCGAGC 202982 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| | ||| || || | ||||| ||||| ||||| ||||||| Sbjct 202983 GATACCATTGACAACG-TGAAGACCAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCA 203041 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| || || || || || || || | | || ||| |||||||| Sbjct 203042 GCAGCGTCTCATCTTTGCTGGTAAGCAACTCGAGGATGGCAGGACGCTCTCGGACTACAA 203101 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| |||| || || Sbjct 203102 CATCCAGAAGGAGTCCACCCTCCA 203125 >seq273 Length=368666 Score = 109 bits (120), Expect = 6e-19 Identities = 90/110 (82%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| |||||||| ||| |||||||||| || ||||||| ||| ||||| ||||| || Sbjct 357240 GACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTTGAG 357181 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 || | ||||| ||| |||||||||||||||||||||| | || || || Sbjct 357180 GATGGCCGCACTCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTCCA 357131 >seq143 Length=90640 Score = 105 bits (116), Expect = 7e-18 Identities = 93/116 (80%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| |||||||| ||| |||||||||| || ||||||| ||| || || ||||| || Sbjct 42997 GACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAG 43056 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 || | |||||||| |||||||||||||||||||||| | || || || || || Sbjct 43057 GATGGTCGCACCCTTTCCGACTACAACATCCAGAAGGAGTCGACACTTCACCTCGT 43112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515216791350240