Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01-
12] 374 sequences; 33,379,470 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq290 113 4e-20
seq273 109 5e-19
seq143 105 6e-18
>seq290
Length=256071
Score = 113 bits (124), Expect = 4e-20
Identities = 132/175 (75%), Gaps = 4/175 (2%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|||||||| || ||||||||||| ||| || |||||| |||||||||||| || ||
Sbjct 202663 GTAGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGGCCATCCTCGAGCTGCTTGCCG 202604
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGTAATTTTTTGT-T 118659
||| | || || |||||||| || ||||| ||||||||||||| ||| | | ||||| |
Sbjct 202603 GCGAAAATCAGGCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGGA--TCTTTGTCT 202546
Query 118660 TAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
| || | |||| ||||| | ||| ||||||| || | || ||||||||
Sbjct 202545 TGACGTTGTCGATCGTGTCGGATGACTCAACCTCGAGTGTGATGGTCTTGCCGGT 202491
Score = 95.1 bits (104), Expect = 1e-14
Identities = 153/215 (71%), Gaps = 10/215 (5%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||||| || ||||| || || |||||||| || | || | ||||||
Sbjct 203132 CACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTCCTGCCATCCTC 203073
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTG 118647
||| || || ||||| |||||||||||||||| || ||||| || |||||||||| |||
Sbjct 203072 GAGTTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTG 203013
Query 118648 TAATTTTTTGT-TTAACCTGTTCGACGGTGTCCGTGCTC---TCGACCTCGACGGTCACC 118703
| | || || || || | || | ||| || |||| || ||||| | || |
Sbjct 203012 GA--TCTTGGTCTTCACGTTGTCAATGGTATC---GCTCGATTCCACCTCCAATGTGATT 202958
Query 118704 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| |||||||| || || || || || || |||||
Sbjct 202957 GTCTTGCCGGTAAGGGTCTTCACGAAGATTTGCAT 202923
Score = 91.5 bits (100), Expect = 1e-13
Identities = 131/185 (71%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||||| || || || |||||||||||||| ||| || ||||| || ||
Sbjct 202392 ACCAGGTGGAGGGTGGATTCCTTTTGAATGTTGTAGTCGGACAGGGTGCGACCGTCTTCA 202333
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || || || |||| | |||||||| || || || || ||||||||||| |
Sbjct 202332 AGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGA 202273
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | |||| ||||| | | ||||||||||| || | || |||
Sbjct 202272 ATCTTGGTCTTGACATTGTCGATAGTGTCGGAGGACTCGACCTCGAGCGTGATGGTCTTG 202213
Query 118710 CCGGT 118714
|||||
Sbjct 202212 CCGGT 202208
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||| | || ||||| || || |||||||| || | ||| || || ||
Sbjct 202904 CACCAAGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTACGGCCGTCTTC 202845
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
| ||| || |||||| | |||||||||||||| || || || |||||||||||||||
Sbjct 202844 CAACTGCTTACCAGCGAAAATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTG 202785
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || || || | || | || |||| ||||||||| | || | || ||
Sbjct 202784 GATCTTGGCCTTGACGTTGTCAATAGTATCCGAAGACTCGACCTCAAGAGTGATGGTCTT 202725
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| |||| || || || || ||||||||
Sbjct 202724 TCCAGTCAATGTCTTGACGAAGATCTGCAT 202695
>seq273
Length=368666
Score = 109 bits (120), Expect = 5e-19
Identities = 95/118 (81%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||||| || ||||| || || |||||||| ||| | |||||| ||||||
Sbjct 357125 ACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCCTCA 357184
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647
||||| || || ||| |||||||||||||||| || || || ||||||||||||||||
Sbjct 357185 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCTG 357242
>seq143
Length=90640
Score = 105 bits (116), Expect = 6e-18
Identities = 90/111 (81%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||| | ||| ||||| || || |||||||| ||| | ||||| ||||||||||||
Sbjct 43107 GTGAAGTGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGACCATCCTCGAGCTG 43048
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
||||||||| |||||||||||||||| || || || ||||||||||||||
Sbjct 43047 CTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 42997
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433828422546808
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |