Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01-
12] 374 sequences; 33,379,470 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq290 118 1e-21
>seq290
Length=256071
Score = 118 bits (130), Expect = 1e-21
Identities = 158/217 (73%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027
||| | |||||| || | ||| |||||| || || ||||| || | || |||| |
Sbjct 203138 ACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTCCTGCC 203079
Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087
|| || || ||||||||||| || ||||| ||||||||||| | || | | ||||||
Sbjct 203078 ATCCTCGAGTTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGAGGGATACCCTCCTT 203019
Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146
|||| || | || || | ||| | | | || |||||||||||||| || | ||||
Sbjct 203018 GTCC-TGGATCTTGGTCTTCACGTTGTCAATGGTATCGCTCGATTCCACCTCCAATGTGA 202960
Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
| || ||||| || || ||||| || |||||||||||
Sbjct 202959 TTGTCTTGCCGGTAAGGGTCTTCACGAAGATTTGCAT 202923
Score = 104 bits (114), Expect = 3e-17
Identities = 126/169 (75%), Gaps = 2/169 (1%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| ||||| ||||| || | |||||| || | || || |||||||| || |||||
Sbjct 202658 CTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 202599
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| || ||||||||||| | || | || |||||||||| ||| ||| |||| |||
Sbjct 202598 AATCAGGCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGGATCTTTGTCTTGA-CGT 202540
Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 43159
| | | ||||||| || || || |||| |||||||| ||||| ||
Sbjct 202539 TGTCGATCGTGTCGGATGACTCAACCTCGAGTGTGATGGTCTTGCCGGT 202491
Score = 96.9 bits (106), Expect = 4e-15
Identities = 153/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027
||| | |||||| || | || |||||| || || ||||| || | ||||| || |
Sbjct 202910 ACGGAGCACCAAGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTACGGCC 202851
Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087
||| || | ||||||||||||||| ||||| ||||||||||| | || | || ||||||
Sbjct 202850 GTCTTCCAACTGCTTACCAGCGAAAATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTT 202791
Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146
||| ||| || |||| ||| | | | || || || || || || | ||||
Sbjct 202790 GTCTTGGATCTTGGCCTTGA-CGTTGTCAATAGTATCCGAAGACTCGACCTCAAGAGTGA 202732
Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|||| || || || | ||||| || ||||| |||||
Sbjct 202731 TGGTCTTTCCAGTCAATGTCTTGACGAAGATCTGCAT 202695
Score = 89.7 bits (98), Expect = 6e-13
Identities = 122/168 (73%), Gaps = 2/168 (1%)
Strand=Plus/Minus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
||||||||||| ||||| || | ||| || || |||| || |||||||| || || ||
Sbjct 202374 TCCTTTTGAATGTTGTAGTCGGACAGGGTGCGACCGTCTTCAAGCTGCTTGCCGGCAAAG 202315
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGT 43111
|| | ||||||||||| | || | | |||||||||| ||| | || || |||| |
Sbjct 202314 ATCAAGCGCTGCTGGTCTGGGGGAATACCCTCCTTGTCC-TGAATCTTGGTCTTGACATT 202256
Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 43159
| | |||||| || || || |||| ||||||||| ||||| ||
Sbjct 202255 GTCGATAGTGTCGGAGGACTCGACCTCGAGCGTGATGGTCTTGCCGGT 202208
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571814926752720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |