Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01- 12] 374 sequences; 33,379,470 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq290 118 1e-21 >seq290 Length=256071 Score = 118 bits (130), Expect = 1e-21 Identities = 158/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | |||||| || | ||| |||||| || || ||||| || | || |||| | Sbjct 203138 ACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTCCTGCC 203079 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || || ||||||||||| || ||||| ||||||||||| | || | | |||||| Sbjct 203078 ATCCTCGAGTTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGAGGGATACCCTCCTT 203019 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 |||| || | || || | ||| | | | || |||||||||||||| || | |||| Sbjct 203018 GTCC-TGGATCTTGGTCTTCACGTTGTCAATGGTATCGCTCGATTCCACCTCCAATGTGA 202960 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || ||||| || || ||||| || ||||||||||| Sbjct 202959 TTGTCTTGCCGGTAAGGGTCTTCACGAAGATTTGCAT 202923 Score = 104 bits (114), Expect = 3e-17 Identities = 126/169 (75%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| ||||| || | |||||| || | || || |||||||| || ||||| Sbjct 202658 CTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 202599 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || ||||||||||| | || | || |||||||||| ||| ||| |||| ||| Sbjct 202598 AATCAGGCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGGATCTTTGTCTTGA-CGT 202540 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 43159 | | | ||||||| || || || |||| |||||||| ||||| || Sbjct 202539 TGTCGATCGTGTCGGATGACTCAACCTCGAGTGTGATGGTCTTGCCGGT 202491 Score = 96.9 bits (106), Expect = 4e-15 Identities = 153/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | |||||| || | || |||||| || || ||||| || | ||||| || | Sbjct 202910 ACGGAGCACCAAGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTACGGCC 202851 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || | ||||||||||||||| ||||| ||||||||||| | || | || |||||| Sbjct 202850 GTCTTCCAACTGCTTACCAGCGAAAATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTT 202791 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 ||| ||| || |||| ||| | | | || || || || || || | |||| Sbjct 202790 GTCTTGGATCTTGGCCTTGA-CGTTGTCAATAGTATCCGAAGACTCGACCTCAAGAGTGA 202732 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| || || || | ||||| || ||||| ||||| Sbjct 202731 TGGTCTTTCCAGTCAATGTCTTGACGAAGATCTGCAT 202695 Score = 89.7 bits (98), Expect = 6e-13 Identities = 122/168 (73%), Gaps = 2/168 (1%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||||||||| ||||| || | ||| || || |||| || |||||||| || || || Sbjct 202374 TCCTTTTGAATGTTGTAGTCGGACAGGGTGCGACCGTCTTCAAGCTGCTTGCCGGCAAAG 202315 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGT 43111 || | ||||||||||| | || | | |||||||||| ||| | || || |||| | Sbjct 202314 ATCAAGCGCTGCTGGTCTGGGGGAATACCCTCCTTGTCC-TGAATCTTGGTCTTGACATT 202256 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 43159 | | |||||| || || || |||| ||||||||| ||||| || Sbjct 202255 GTCGATAGTGTCGGAGGACTCGACCTCGAGCGTGATGGTCTTGCCGGT 202208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571814926752720