Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01-
12] 374 sequences; 33,379,470 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq290 131 1e-25
seq273 84.2 1e-11
>seq290
Length=256071
Score = 131 bits (144), Expect = 1e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || ||||| | ||||||| ||| | ||| || ||||| ||||||||||| ||
Sbjct 202921 CCACCACGCAGACGGAGCACCAAGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCCGAG 202862
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| |||| |||| ||||||||||| || ||||||||||| ||||||||||| |||
Sbjct 202861 AGAGTACGGCCGTCTTCCAACTGCTTACCAGCGAAAATGAGACGCTGCTGGTCTGGGGGG 202802
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||||||| ||||| ||| | | | | || | ||| | || |||||
Sbjct 202801 ATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCAATAGTATCCGAAGACTCGACC 202742
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | |||||||| || || || | || || || |||||||||||
Sbjct 202741 TCAAGAGTGATGGTCTTTCCAGTCAATGTCTTGACGAAGATCTGCAT 202695
Score = 109 bits (120), Expect = 4e-19
Identities = 138/190 (73%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| || || || | |||| || ||||| ||||||||||||||||| ||| | ||
Sbjct 202678 AGGACGAGATGCAGAGTAGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGGCCATCC 202619
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| | ||||||||| |||||||| || ||||||||||| || | || |||||||||
Sbjct 202618 TCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCC 202559
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
|||||| ||| | | | | |||| |||| || || || || | ||||||||
Sbjct 202558 TGGATCTTTGTCTTGACGTTGTCGATCGTGTCGGATGACTCAACCTCGAGTGTGATGGTC 202499
Query 34358 TTGCCGGTGA 34367
||||||||||
Sbjct 202498 TTGCCGGTGA 202489
Score = 107 bits (118), Expect = 1e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
||||| || || | ||||||| ||| | || || ||||| ||||||||||| ||
Sbjct 203149 CCGCCACGAAGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAG 203090
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
||| | | | || || | ||||| || || || ||||| ||||||||||| ||
Sbjct 203089 AGCGTCCTGCCATCCTCGAGTTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGAGGG 203030
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | ||||||||| ||||| ||| | | | | || | |||| ||||||| ||
Sbjct 203029 ATACCCTCCTTGTCCTGGATCTTGGTCTTCACGTTGTCAATGGTATCGCTCGATTCCACC 202970
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| ||||| || |||||||| || || ||||| ||||| |||||
Sbjct 202969 TCCAATGTGATTGTCTTGCCGGTAAGGGTCTTCACGAAGATTTGCAT 202923
Score = 100 bits (110), Expect = 2e-16
Identities = 136/190 (72%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| |||||||| | || ||| || || ||||||||||||||||| || ||||
Sbjct 202395 AGGACCAGGTGGAGGGTGGATTCCTTTTGAATGTTGTAGTCGGACAGGGTGCGACCGTCT 202336
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| | ||||||||| || || || | ||||||||||| ||| | | |||||||||
Sbjct 202335 TCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCTGGGGGAATACCCTCCTTGTCC 202276
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | || | | || | |||| || ||||| || | |||||||||
Sbjct 202275 TGAATCTTGGTCTTGACATTGTCGATAGTGTCGGAGGACTCGACCTCGAGCGTGATGGTC 202216
Query 34358 TTGCCGGTGA 34367
||||||||||
Sbjct 202215 TTGCCGGTGA 202206
>seq273
Length=368666
Score = 84.2 bits (92), Expect = 1e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || ||||| | || |||| ||| | || || ||||| ||||||||||||||
Sbjct 357107 CCACCACGCAGGCGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 357166
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| | || || | ||||||||| ||||| ||||| ||||||||||| |||
Sbjct 357167 AGAGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGA 357226
Query 34283 ACGCTCTCCTTGTC 34296
| || |||||||||
Sbjct 357227 ATGCCCTCCTTGTC 357240
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323070527397440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |