Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01- 12] 374 sequences; 33,379,470 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq188 414 9e-111 seq290 95.1 1e-14 >seq188 Length=237477 Score = 414 bits (458), Expect = 9e-111 Identities = 1248/1899 (66%), Gaps = 52/1899 (3%) Strand=Plus/Minus Query 22104 TCTTG-TCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATG 22162 ||||| || || || ||||| |||| | ||| | |||| || ||||| |||||| Sbjct 168910 TCTTGGTCGACAGTGAACTGAATGGGAGCAGAGGCAGCCATGGTACGGAGATAGTACATG 168851 Query 22163 CCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTC 22222 || ||||| ||||| | |||||| || ||| || || || || | || || | Sbjct 168850 CCTGTCTTGAGACCAAGCTTCCATCCGGCAAAGTGCATGGAGGTGATCTTGCCCATGGTG 168791 Query 22223 GGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCG 22282 ||| | ||||| | |||| ||||| ||| || || || || || || ||||| Sbjct 168790 GGCTCCTTCATGTGGATGTTGAGTGACTGGGACTGGTCAATGAAGGCACCACGGTCGGCA 168731 Query 22283 GCCATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATC 22342 ||||| | || | || ||| ||| |||||||| || || ||||| || | || || Sbjct 168730 GCCATCTGGATAATGGTTCGCTGCGAGATTTCCCAAACAGTTTTGTAGAGGGTCTTGGTC 168671 Query 22343 TCTAACGGTATCGATTCG--ATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTT 22400 || || || ||| | ||||| | ||| || | | ||||| || | Sbjct 168670 TCCTCAGGGAT--ATTGGGGATCCTGGCAATGGAGCCACCCTCGGCGATGATACGGTTCT 168613 Query 22401 TAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAG--ATGACGGTTCAC 22458 | || | || ||||| || || || | || |||| || ||| |||| || Sbjct 168612 TCATGTTCTCAGACCACAGGCCCATATCGACAAGGTCCTTGAGCAACCATG--GGTTGAC 168555 Query 22459 CACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAA 22518 || || ||||| || | | || |||||| ||| |||||||| ||| | || ||||| Sbjct 168554 GACCTGGAACTCACCCGCGAGCACACGGCGTGAGTAGATGTTGGAGGTGTAGGGCTCGAA 168495 Query 22519 AGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAG 22578 | ||||||||||| || ||||||| |||||| || || ||||| || || | ||| || Sbjct 168494 GCACTCATTGTTTCCGAGAATCTGAGAGGTCGAGGCAGTTGGCATAGGTGCAATCAGCAG 168435 Query 22579 CGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATC 22638 |||||| | | ||||||| | || || ||| || | ||||||||| ||||| Sbjct 168434 CGAGTTGCGGACACCGTGCTGAGCGATCTTGGCCTTCAGTTCAGCCCAGTCCCAGAGATC 168375 Query 22639 GGACGGCGTCACATTGTCCCACATATCGTATTGCA--ACACGCCGCGACTCGCCGGGCTG 22696 || || || || || |||||| || || || | | || | | || || ||| | Sbjct 168374 GGTGGGGGTAACGTT---CCACATGTCATACTGAAGGATACCCTGTGAGACGG-GGGATC 168319 Query 22697 CCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCG 22756 ||| |||| || ||||| |||||| | ||||| |||||| | || || Sbjct 168318 CCT-CGTAGGTCTCGTAAGGACCAAGCTCCTTGGCAATGTCGCAGGAGGAGGTCAGAGCA 168260 Query 22757 CCGTAATATATAGTCTCGAAGATTTTCTTGTTCAA-TTC--GGCGGCGGC-GACGCTTTC 22812 | | || || ||||||||||| | |||| | ||| ||| |||| ||| || Sbjct 168259 GCATGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCGGCCGAC----TC 168204 Query 22813 GTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGG 22872 | | |||| |||| | ||| || || |||| ||| || || || ||||| || || Sbjct 168203 GAATGGCAGGCGCAGTGCGAGGAAAGCATCAGCCAGACCTTGCACACCCATACCAATGGG 168144 Query 22873 TCGGTTTTTCAGATT----CGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGA 22928 ||||| | || || | | | ||||| | || || || ||| | Sbjct 168143 TCGGTGGCGGAAGTTGCTGCGGCGCGCCT-CCTCG---ACGGGGTAGTGGTTGACATCAA 168088 Query 22929 TTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGT 22988 | | |||||||||| | || |||| | || | | ||||| Sbjct 168087 TGATCTTGTTCAAGTTGCGAGTGACAACCTGGGTGACCTCGTGGAGCTTCTTGAAGTCAA 168028 Query 22989 AAACGCC-CGATTGTA--CAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGG 23045 | | || || ||||| | ||||| | ||| | ||||| | ||||| || | Sbjct 168027 ACTCTCCGCGCTTGTAGTCGACAAAGGAAGGCAGGGCAAGGGAGGCCAAGTTGCAGACAG 167968 Query 23046 CCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCG 23105 | |||||||| || |||||||| | |||||| || || || ||| | || | Sbjct 167967 CGACCTCGTCAGGGGCAGTGTACTCGATAATTTCCGTGCACAGGTTGGAGCTGCGAATGG 167908 Query 23106 TGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCG 23165 | |||| || |||||||||| || || ||||| | |||||||||||||||| | || Sbjct 167907 TACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTAGAGCATGAAGGGAT 167848 Query 23166 TGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTC 23225 | || |||||| ||| | ||||| || || ||||| |||| ||| | ||| ||| Sbjct 167847 TACCAGTCTCGGTCTGGGCCTCGAGAATGGCATACCACAGCTTCTGGGCGCGGACA-GTC 167789 Query 23226 GCACGTACCTGCCTTCTTC--CTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTA 23283 |||| ||| |||| | |||||| | | ||||| ||| ||||| || | ||||| Sbjct 167788 TCACGGCCCTTG-TTCTGCTTCTCGTAGCTCTCGTACAGCGCCTCAAACTCCTCGCCGTA 167730 Query 23284 -ACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTT 23342 ||| || |||||||| || | | | || ||||||||| ||||| || | || Sbjct 167729 GACA-TCAGCCAGGCCAGGGCACTCGTTGGGGCACATGAGAGTCCACTCGCCGTTCTCTT 167671 Query 23343 CAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCA 23402 || || |||| || ||||| || ||||| ||||||||||| || || |||||||| | Sbjct 167670 GGACACGCTTCATGAACAGATCGGGAATCCACAGAGCGTAGAAGAGATCACGGGCGCGAA 167611 Query 23403 CCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACG 23462 ||||||| |||||| |||||| | || | ||| | || | ||| || ||||| | Sbjct 167610 CCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAAGCCAAAGATGTCAGCGTGCCATG 167551 Query 23463 GCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGG 23522 |||||||||| | |||||| || || || | ||| ||||| ||||| ||||||||||| | Sbjct 167550 GCTCGAGGTAGATGGCAAAGGCACCTGGACGCTTGTTGCCACCCTGGTCGACGTAACGAG 167491 Query 23523 CCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCG 23582 | ||||| ||||| || | ||||| || | |||||||| || | ||| | ||| Sbjct 167490 CAGTGTTATTGTATACACGGAGCATAGGGATAAGACCGTTTGATGTTCCG-TTGGTGCCG 167432 Query 23583 CCACACT-CGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGAT 23641 ||| | || || | || || | ||| |||| || ||| || || || | | Sbjct 167431 CCAATGTATGAGCCGGTGGCACGGATTCGGTGCACGTTGAGACCAATACCGCCAGCGGTC 167372 Query 23642 TTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTG 23701 || || |||| || || || ||||||||||||||||| || ||||| |||||||| Sbjct 167371 TTGGAGATCAAGGCACACGTCTTGAGAGTGTCGTAGATGCCGTCAATGCTATCCTCTTTC 167312 Query 23702 GTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTC 23761 | ||| | ||| || || ||||| || | || ||| |||| |||||| ||| Sbjct 167311 ATGTCGATAAGGAAGCAGGAGGACATCTGAGGGGATGGAGTACCGGCATTGAACAGCGTC 167252 Query 23762 GGGCTGGCGTGCGTAAAGTATCCATTCGACAT-TAGATTGTACGTGTCGATGGCGGCATC 23820 || |||||| || |||||| | ||||| ||| | || || || ||||| || Sbjct 167251 GGTGAGGCGTGTGTGAAGTATTTTTGTGACATGTAG-TCATAGGTCTCAATGGCCTTCTC 167193 Query 23821 AATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCG-- 23878 ||||||||| ||||| ||||||| || || ||||| | ||||| || || | |||| Sbjct 167192 AATGTCCTCGCCGTGGATACCGACAGCAACACGCATGAGCATGTGCTGTGGGCGCTCGGC 167133 Query 23879 -ACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATA 23937 ||| | ||| | || || || ||||| || | | || || || |||||| | Sbjct 167132 AACCTT---GCCATCTATGCGGAGGAGGTATGAGCGCTCAAGTGTCTTGAAGCCAAAA-A 167077 Query 23938 GTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATT 23976 | ||||| ||||| || || | ||||| ||||| || Sbjct 167076 TTGGTAGTTGAAGTCTCGGTCATATACTATAGCCGAGTT 167038 >seq290 Length=256071 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/189 (72%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 31217 ACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAAACGGTCAA-ACA 31275 || ||||| || ||||| |||| ||||| | ||||||| |||| | ||||| ||| Sbjct 202491 ACCGGCAAGACCATCACACTCGAGGTTGAGTCATCCGACACGATCGACAACGTCAAGACA 202550 Query 31276 GAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAA 31335 ||| | ||||||||| ||| | || || ||||||||||| || || ||||| ||||| Sbjct 202551 AAGA-TCCAGGACAAGGAGGGCATTCCTCCAGACCAGCAGCGCCTGATTTTCGCCGGCAA 202609 Query 31336 ACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCA 31395 ||| | || || ||| || ||| || |||||||| || || || ||||| || Sbjct 202610 GCAGCTCGAGGATGGCCGCACTCTGTCCGACTACAACATTCAGAAGGAGTCTACTCTGCA 202669 Query 31396 TCTGGTACT 31404 ||| || || Sbjct 202670 TCTCGTCCT 202678 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| |||| || || || ||||| | || || || | || Sbjct 202695 ATGCAGATCTTCGTCAAGACATTGACTGGAAAGACCATCACTCTTGAGGTCGAGTCTTCG 202754 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | | || | ||||| | || |||||||| ||| | || || |||||| Sbjct 202755 GATACTATTGACAACGTCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCAG 202814 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || |||||||| || |||||||||||| ||| | || || ||| Sbjct 202815 CAGCGTCTCATTTTCGCTGGTAAGCAGTTGGAAGACGGCCGTACTCTCTCGGACTACAAC 202874 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || || || |||||||| |||| || | ||| | || |||| Sbjct 202875 ATCCAGAAGGAGTCAACTCTTCACTTGGTGCTCCGTCTGCGTGGTGGTA 202923 Score = 91.5 bits (100), Expect = 1e-13 Identities = 135/189 (71%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 31217 ACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAAACGGTCAA-ACA 31275 || ||||| || ||||| |||| || || | ||||||| | |||| | ||||| || Sbjct 202208 ACCGGCAAGACCATCACGCTCGAGGTCGAGTCCTCCGACACTATCGACAATGTCAAGACC 202267 Query 31276 GAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAA 31335 ||| | ||||||||| || | || || ||||||||||| | || || || ||||| Sbjct 202268 AAGATTCA-GGACAAGGAGGGTATTCCCCCAGACCAGCAGCGCTTGATCTTTGCCGGCAA 202326 Query 31336 ACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCA 31395 ||| | |||||| | || || ||| || ||||||||||| ||||| || || || Sbjct 202327 GCAGCTTGAAGACGGTCGCACCCTGTCCGACTACAACATTCAAAAGGAATCCACCCTCCA 202386 Query 31396 TCTGGTACT 31404 ||||| || Sbjct 202387 CCTGGTCCT 202395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445764316042080