Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01- 12] 374 sequences; 33,379,470 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq188 104 2e-17 seq290 87.8 2e-12 >seq188 Length=237477 Score = 104 bits (114), Expect = 2e-17 Identities = 380/589 (65%), Gaps = 7/589 (1%) Strand=Plus/Minus Query 153912 GGACATTCGTTGGGACACATCAGTGACCATCGGCCATTTTCTTGAACGCGACGCATAAAT 153971 || || |||||||| ||||| || | ||| ||| || ||||| || || ||| || Sbjct 167713 GGGCACTCGTTGGGGCACATGAGAGTCCACTCGCCGTTCTCTTGGACACGCTTCATGAAC 167654 Query 153972 ATATCGGGAACCCATAGGGCGTTCATCAGGTCGCGCGCTTTCGTGTCTTCGCTGCCAATG 154031 | |||||||| ||| || |||| | || || || || || || |||| | Sbjct 167653 AGATCGGGAATCCACAGAGCGTAGAAGAGATCACGGGCGCGAACCTCCTCCTTGCCGTGG 167594 Query 154032 TTTCGACGCATGTGTAAGACGTCCATTATGTCGCAATGCCACGGTTCCACGTAAACTGCT 154091 || || | || | || | | | ||||| ||||| || || | ||| | || Sbjct 167593 TTCTTGCGGAGGTCGAGGAAGCCAAAGATGTCAGCGTGCCATGGCTCGAGGTAGATGGCA 167534 Query 154092 TGAGCGCCTTTACGCTTG---CCGCCCTGATTTACGTGACGCACCATATTGTTGAAAACC 154148 || ||| ||||||| || ||||| | |||| ||| | | || ||| | || Sbjct 167533 AAGGCACCTGGACGCTTGTTGCCACCCTGGTCGACGTAACGAGCAGTGTTATTGTATACA 167474 Query 154149 CGAAGCATGGGTAGCAGACCGCTGGCGGTACCGTTTGTAGATTTAATCTTGCTGTTGCGG 154208 || ||||| || | |||||| | | || ||||| || ||| | | | | Sbjct 167473 CGGAGCATAGGGATAAGACCGTTTGATGTTCCGTTGGTGCCGCCAATGTATGAGCCGGTG 167414 Query 154209 CCTCGAACGCTGTTTACGTTTAATCCAATACCGCCGCCGTGTTTGGAGATCATGGCGCAA 154268 | || | | || ||||| | ||||||||||| || |||||||||| ||| || Sbjct 167413 GCACGGATTCGGTGCACGTTGAGACCAATACCGCCAGCGGTCTTGGAGATCAAGGCACAC 167354 Query 154269 TCGTTCAATGTGTTATAGATACCACGAATGCTATCGCTTTCCATGGTCAAT-AGGAAACA 154327 || | |||| ||||| || ||||||||| || ||| ||| || ||||| || Sbjct 167353 GTCTTGAGAGTGTCGTAGATGCCGTCAATGCTATCCTCTTTCAT-GTCGATAAGGAAGCA 167295 Query 154328 TGAACTCATCTGCGGAGTTGGAGTGCCGGCAGCAAACATGGTCGGGCTTGCGTGCGTGTA 154387 || |||||| || | |||||| |||||| |||| ||||| ||||| ||| | Sbjct 167294 GGAGGACATCTGAGGGGATGGAGTACCGGCATTGAACAGCGTCGGTGAGGCGTGTGTGAA 167235 Query 154388 -CATCTTTGTGCTCAAAAATTTATAAGACTTTATGGCATTATCAATGTCGTCTCCAAAGA 154446 || |||||| || | | ||| | || ||||| || |||||||| || || || Sbjct 167234 GTATTTTTGTG-ACATGTAGTCATAGGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGGA 167176 Query 154447 TACCTAGAGCTATACGCATGTGCATGTGTTGAATCCTTTCGGCAACTTT 154495 |||| | ||| | ||||||| ||||||| || | |||||||| || Sbjct 167175 TACCGACAGCAACACGCATGAGCATGTGCTGTGGGCGCTCGGCAACCTT 167127 >seq290 Length=256071 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594 || ||||| || | ||| | || ||||| | || ||||| || || ||||| || || Sbjct 203152 TGACCGCCACGAAGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCC 203093 Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654 | || || || ||||| || ||||||||| |||| ||||| ||||| || ||| Sbjct 203092 GAGAGCGTCCTGCCATCCTCGAGTTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGA 203033 Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCC 139714 || || || || ||||| ||| || || | | || | || ||| | | ||| Sbjct 203032 GGGATACCCTCCTTGTCCTGGATCTTGGTCTTCACGTTGTCAATGGTATCGCTCGATTCC 202973 Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||||| | || | ||||||||||| | || || ||||| ||||||||| Sbjct 202972 ACCTCCAATGTGATTGTCTTGCCGGTAAGGGTCTTCACGAAGATTTGCATA 202922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496061680900800