Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01-
12] 374 sequences; 33,379,470 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq188 104 2e-17
seq290 87.8 2e-12
>seq188
Length=237477
Score = 104 bits (114), Expect = 2e-17
Identities = 380/589 (65%), Gaps = 7/589 (1%)
Strand=Plus/Minus
Query 153912 GGACATTCGTTGGGACACATCAGTGACCATCGGCCATTTTCTTGAACGCGACGCATAAAT 153971
|| || |||||||| ||||| || | ||| ||| || ||||| || || ||| ||
Sbjct 167713 GGGCACTCGTTGGGGCACATGAGAGTCCACTCGCCGTTCTCTTGGACACGCTTCATGAAC 167654
Query 153972 ATATCGGGAACCCATAGGGCGTTCATCAGGTCGCGCGCTTTCGTGTCTTCGCTGCCAATG 154031
| |||||||| ||| || |||| | || || || || || || |||| |
Sbjct 167653 AGATCGGGAATCCACAGAGCGTAGAAGAGATCACGGGCGCGAACCTCCTCCTTGCCGTGG 167594
Query 154032 TTTCGACGCATGTGTAAGACGTCCATTATGTCGCAATGCCACGGTTCCACGTAAACTGCT 154091
|| || | || | || | | | ||||| ||||| || || | ||| | ||
Sbjct 167593 TTCTTGCGGAGGTCGAGGAAGCCAAAGATGTCAGCGTGCCATGGCTCGAGGTAGATGGCA 167534
Query 154092 TGAGCGCCTTTACGCTTG---CCGCCCTGATTTACGTGACGCACCATATTGTTGAAAACC 154148
|| ||| ||||||| || ||||| | |||| ||| | | || ||| | ||
Sbjct 167533 AAGGCACCTGGACGCTTGTTGCCACCCTGGTCGACGTAACGAGCAGTGTTATTGTATACA 167474
Query 154149 CGAAGCATGGGTAGCAGACCGCTGGCGGTACCGTTTGTAGATTTAATCTTGCTGTTGCGG 154208
|| ||||| || | |||||| | | || ||||| || ||| | | | |
Sbjct 167473 CGGAGCATAGGGATAAGACCGTTTGATGTTCCGTTGGTGCCGCCAATGTATGAGCCGGTG 167414
Query 154209 CCTCGAACGCTGTTTACGTTTAATCCAATACCGCCGCCGTGTTTGGAGATCATGGCGCAA 154268
| || | | || ||||| | ||||||||||| || |||||||||| ||| ||
Sbjct 167413 GCACGGATTCGGTGCACGTTGAGACCAATACCGCCAGCGGTCTTGGAGATCAAGGCACAC 167354
Query 154269 TCGTTCAATGTGTTATAGATACCACGAATGCTATCGCTTTCCATGGTCAAT-AGGAAACA 154327
|| | |||| ||||| || ||||||||| || ||| ||| || ||||| ||
Sbjct 167353 GTCTTGAGAGTGTCGTAGATGCCGTCAATGCTATCCTCTTTCAT-GTCGATAAGGAAGCA 167295
Query 154328 TGAACTCATCTGCGGAGTTGGAGTGCCGGCAGCAAACATGGTCGGGCTTGCGTGCGTGTA 154387
|| |||||| || | |||||| |||||| |||| ||||| ||||| ||| |
Sbjct 167294 GGAGGACATCTGAGGGGATGGAGTACCGGCATTGAACAGCGTCGGTGAGGCGTGTGTGAA 167235
Query 154388 -CATCTTTGTGCTCAAAAATTTATAAGACTTTATGGCATTATCAATGTCGTCTCCAAAGA 154446
|| |||||| || | | ||| | || ||||| || |||||||| || || ||
Sbjct 167234 GTATTTTTGTG-ACATGTAGTCATAGGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGGA 167176
Query 154447 TACCTAGAGCTATACGCATGTGCATGTGTTGAATCCTTTCGGCAACTTT 154495
|||| | ||| | ||||||| ||||||| || | |||||||| ||
Sbjct 167175 TACCGACAGCAACACGCATGAGCATGTGCTGTGGGCGCTCGGCAACCTT 167127
>seq290
Length=256071
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594
|| ||||| || | ||| | || ||||| | || ||||| || || ||||| || ||
Sbjct 203152 TGACCGCCACGAAGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCC 203093
Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654
| || || || ||||| || ||||||||| |||| ||||| ||||| || |||
Sbjct 203092 GAGAGCGTCCTGCCATCCTCGAGTTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGA 203033
Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCC 139714
|| || || || ||||| ||| || || | | || | || ||| | | |||
Sbjct 203032 GGGATACCCTCCTTGTCCTGGATCTTGGTCTTCACGTTGTCAATGGTATCGCTCGATTCC 202973
Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
||||| | || | ||||||||||| | || || ||||| |||||||||
Sbjct 202972 ACCTCCAATGTGATTGTCTTGCCGGTAAGGGTCTTCACGAAGATTTGCATA 202922
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496061680900800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |