Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01- 12] 374 sequences; 33,379,470 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq188 84.2 2e-11 >seq188 Length=237477 Score = 84.2 bits (92), Expect = 2e-11 Identities = 379/594 (64%), Gaps = 15/594 (3%) Strand=Plus/Minus Query 157333 AGGACACTCGTTAGGACACATTAATGACCATATACCGTTTTCTTCAACGCGTTTCATAAA 157392 ||| |||||||| || ||||| | | ||| ||||| |||| || || ||||| || Sbjct 167714 AGGGCACTCGTTGGGGCACATGAGAGTCCACTCGCCGTTCTCTTGGACACGCTTCATGAA 167655 Query 157393 TATATCGGGAACCCATAAAGCGTTCATCAAATCACGCGCTTTGGTGTCTTCGCTGCCAAT 157452 | |||||||| ||| | ||||| | | |||||| || || || |||| Sbjct 167654 CAGATCGGGAATCCACAGAGCGTAGAAGAGATCACGGGCGCGAACCTCCTCCTTGCCGTG 167595 Query 157453 GTTTCGACGCATGTGTAAAACGTCCATAATGTCGCAATGCCACGGTTCAACGTACACTGC 157512 ||| || | || | | | | | ||||| ||||| || || | ||| | || Sbjct 167594 GTTCTTGCGGAGGTCGAGGAAGCCAAAGATGTCAGCGTGCCATGGCTCGAGGTAGATGGC 167535 Query 157513 TTGGGCTCCTTTTCGCTTG---CCACCTTGATCCACGTGACGCACCATATTATTAAAAAC 157569 ||| ||| |||||| ||||| || || |||| ||| | | ||||| | || Sbjct 167534 AAAGGCACCTGGACGCTTGTTGCCACCCTGGTCGACGTAACGAGCAGTGTTATTGTATAC 167475 Query 157570 TCGCAGCATTGGTAGCAGTCCGCTGGCGGTGCCGTTCGTAG----ATTTTATTTTGCTGT 157625 || ||||| || | || ||| | | || ||||| || | | ||| | || Sbjct 167474 ACGGAGCATAGGGATAAGACCGTTTGATGTTCCGTTGGTGCCGCCAATGTATGAGCCGGT 167415 Query 157626 TGCGGCCGCGTACGCTGTTCACGTTCAATCCAATACCGCCGCCGTGTTTAGAGATCATGG 157685 || || | | || |||||| | ||||||||||| || || ||||||| || Sbjct 167414 GGCA----CGGATTCGGTGCACGTTGAGACCAATACCGCCAGCGGTCTTGGAGATCAAGG 167359 Query 157686 CGCAATCGTTTAATGTGTTATAGATGCCGCGAATGCTATCGCTTTCCATGGTCAAT-AGA 157744 | || || | |||| ||||||||| ||||||||| || ||| ||| || || Sbjct 167358 CACACGTCTTGAGAGTGTCGTAGATGCCGTCAATGCTATCCTCTTTCAT-GTCGATAAGG 167300 Query 157745 AAACATGAACTCATCTGCGGAGTCAGACTGCCGGCAGCGAACATGGTTGGGCTTGCGTGC 157804 || || || |||||| || | || | |||||| ||||| || || ||||| Sbjct 167299 AAGCAGGAGGACATCTGAGGGGATGGAGTACCGGCATTGAACAGCGTCGGTGAGGCGTGT 167240 Query 157805 GTGTA-CATTTTTCTGCTCAAAAATTTATAGGATTTTATGGCACTATCAATGTCGTCTCC 157863 ||| | |||||| || || | | ||||| | ||||| | |||||||| || || Sbjct 167239 GTGAAGTATTTTTGTG-ACATGTAGTCATAGGTCTCAATGGCCTTCTCAATGTCCTCGCC 167181 Query 157864 AAAGATTCCTAAAGCTATACGCATGTGCATATGTTGAATCCTTTCGGCAACCTT 157917 ||| || | ||| | ||||||| |||| || || | ||||||||||| Sbjct 167180 GTGGATACCGACAGCAACACGCATGAGCATGTGCTGTGGGCGCTCGGCAACCTT 167127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507012029707680