Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01-
12] 374 sequences; 33,379,470 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq154 221 2e-52
seq188 188 1e-42
>seq154
Length=40832
Score = 221 bits (244), Expect = 2e-52
Identities = 581/889 (65%), Gaps = 71/889 (8%)
Strand=Plus/Plus
Query 125022 TGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCC 125081
||| |||||||||| ||||| |||| || || ||||| | ||| ||| | ||||| |||
Sbjct 12892 TGGCAAATGTACAAGAAGGCCGAGGC-TCTTTCTGGACCGCCGAGGAGATTGATCTCTCC 12950
Query 125082 AAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCAC 125141
||||| || |||| ||| | | || ||| || ||||| || || || |||
Sbjct 12951 AAGGATCTTCACGACTGGAACAAGCGCCTGAACGACGACGAGCGCTTTTTCATCTCCCAC 13010
Query 125142 ATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGATTC 125201
| | ||||||||||||| ||||||||| ||||||||||| || ||| | || |||
Sbjct 13011 GTCCTCGCCTTCTTTGCCGCCTCCGATGGCATCGTCAACGAGAACCTGGTCGAGCGTTTC 13070
Query 125202 TCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATTGAG 125261
|| || | || || |||| | ||||| ||||| ||||| |||||||| |||
Sbjct 13071 TCCAGCGAAGTACAGATACCCGAGGCGCGTTGCTTCTACGGCTTCCAGATCATGATGGAG 13130
Query 125262 AACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC---GCAA 125318
||||| ||||| || | |||||| || || |||| |||||| |||| || |||
Sbjct 13131 AACGTCCACTCTGAGACTTACTCTCTGCTCATCGACACCTACATTAGCGAGCCTAGGCAG 13190
Query 125319 CGTAAACACATGCTCTTTAACGCAATCGAC-ACGGT---------------GC------- 125355
|| | || || || ||||| |||||| || || ||
Sbjct 13191 CGCCAGTAC---CTGTTCAACGCTATCGACAACAGTAAGTTACCCCACAACGCGCTTCAA 13247
Query 125356 ------CGTCT--------------------ATACGTAAAAAGGCTCAATGGGTGATTCG 125389
||||| || || || ||||| | |||| | ||
Sbjct 13248 TTTACGCGTCTAACGCGTCATAGTTCCCTGCATCCGCAAGAAGGCCGACTGGGCCCTGCG 13307
Query 125390 GTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGA 125449
|||||| ||| | || || | | |||| | | || || || ||||| || || ||
Sbjct 13308 ATGGATCTCGGACAAGAACTCCACTTTCGCCAGCCGTCTTGTCGCGTTCGCTGCTGTTGA 13367
Query 125450 GGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCAT 125509
||| ||||||||| ||| || || ||||||| ||| | |||||||| || || ||
Sbjct 13368 GGGTATCTTCTTTAGCGGTTCGTTCGCATCCATCTTCTGGTTGAAGAAGCGTGGCCTAAT 13427
Query 125510 GCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTT 125569
||| || || || | |||||| | || ||||| || |||||| | ||| ||||||
Sbjct 13428 GCCTGGCCTTACCTTCTCCAACGAGCTCATCTCTCGTGATGAGGGCATGCACACTGACTT 13487
Query 125570 TGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGT 125629
||| || || || || ||| || | | | | ||||| | || ||
Sbjct 13488 CGCCTGCCTGCTCTT------CTCTCT---TCTCAACACCCGCCCCAGCAAGGAGGCCGT 13538
Query 125630 CATCAA--CATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTA 125687
| ||| ||| | ||||| || || ||| || |||||||| || | ||| | ||
Sbjct 13539 C--CAAGCCATCATCACCGAGGCTGTTCAGATTGAGCAAGAGTTCCTCAGCGACGCTCTG 13596
Query 125688 CCGGTCAGC-ATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGC 125746
|| | || || | ||||||||| |||||| |||||| ||||||| |||||||| ||
Sbjct 13597 CC-CTGTGCTCTGCTCGGCATGAACGCCAAGCTCATGTGCCAGTACATTGAGTTTGTCGC 13655
Query 125747 AGATCGTCTACTGTACGAGTTGATTGGCCGCAAGATTTACAACGCCAAGAATCCCTTTGA 125806
|||||||| ||| || ||| | |||| ||||| |||||| || ||||||||
Sbjct 13656 TGATCGTCTGCTGCTCGCATTGGGCAACACCAAGGTTTACCACGCCACCAACCCCTTTGA 13715
Query 125807 TTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTCGAGAAG 125855
|||||| | ||| || || | || ||||||||||| |||||||||
Sbjct 13716 CTTCATGGAGAACATCTCGCTTGCTGGCAAGACCAACTTCTTCGAGAAG 13764
>seq188
Length=237477
Score = 188 bits (208), Expect = 1e-42
Identities = 349/504 (69%), Gaps = 6/504 (1%)
Strand=Plus/Plus
Query 96834 CCAATGCTCAGAATGTACAATG-CAATGTCACGATACGTTACACAGGGCGGCAATAAACG 96892
|| |||||| | | |||||| || || | || ||||| ||||| ||||| || ||
Sbjct 167463 CCTATGCTCCGTGTATACAATAACACTG-CTCGTTACGTCGACCAGGGTGGCAACAAGCG 167521
Query 96893 GCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTTTATCGA 96952
||||| || | ||| ||||| | || || |||||||| ||| | |||| ||| ||||
Sbjct 167522 TCCAGGTGCCTTTGCCATCTACCTCGAGCCATGGCACGCTGACATCTTTGGCTTCCTCGA 167581
Query 96953 GATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTATGCACTCTG 97012
| ||||| ||| ||| || |||| || ||| | || | || || || || ||
Sbjct 167582 CCTCCGCAAGAACCACGGCAAGGAGGAGGTTCGCGCCCGTGATCTCTTCTACGCTCTGTG 167641
Query 97013 GGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTACTGGAGCCTAATGTGCCC 97072
| | || ||| ||||||||||||| ||| | || ||| | |||| || ||||||||
Sbjct 167642 GATTCCCGATCTGTTCATGAAGCGTGTCCAAGAGAACGGCGAGTGGACTCTCATGTGCCC 167701
Query 97073 CGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGAGGCCAAGTACACGGC 97132
| || || || || ||| | ||| || ||||| ||||||||||| |||| |
Sbjct 167702 CAACGAGTGCCCTGGCCTGGCTGATGTCTACGGCGAGGAGTTTGAGGCGCTGTACGAGAG 167761
Query 97133 CTACGAGCAAGAGGGC-CGATACGTGAGACGAGTCGATGCACGAGAA-CTGTGGAAGGCC 97190
||||||| | || | | |||||||| ||| || | |||| |||||| | |||
Sbjct 167762 CTACGAGAAGCAGAACAAGGGCCGTGAGAC-TGTCCGCGC-CCAGAAGCTGTGGTATGCC 167819
Query 97191 ATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGATACCGTGAAT 97250
|| | ||| ||| |||||||| | ||| | ||| |||||||||||| | ||
Sbjct 167820 ATTCTCGAGGCCCAGACCGAGACTGGTAATCCCTTCATGCTCTACAAGGATGCTTGCAAC 167879
Query 97251 CGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGCACGGAAATT 97310
||||| |||||||| || |||| ||||| ||||||| |||||||||||||||
Sbjct 167880 CGCAAGAGCAACCAGAAGAACCTGGGTACCATTCGCAGCTCCAACCTGTGCACGGAAATT 167939
Query 97311 GTAGAGTACGCCTCTCCGGACGAG 97334
| |||||| | | || ||||||
Sbjct 167940 ATCGAGTACACTGCCCCTGACGAG 167963
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741055735548240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |