Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01- 12] 374 sequences; 33,379,470 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq154 221 2e-52 seq188 188 1e-42 >seq154 Length=40832 Score = 221 bits (244), Expect = 2e-52 Identities = 581/889 (65%), Gaps = 71/889 (8%) Strand=Plus/Plus Query 125022 TGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCC 125081 ||| |||||||||| ||||| |||| || || ||||| | ||| ||| | ||||| ||| Sbjct 12892 TGGCAAATGTACAAGAAGGCCGAGGC-TCTTTCTGGACCGCCGAGGAGATTGATCTCTCC 12950 Query 125082 AAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCAC 125141 ||||| || |||| ||| | | || ||| || ||||| || || || ||| Sbjct 12951 AAGGATCTTCACGACTGGAACAAGCGCCTGAACGACGACGAGCGCTTTTTCATCTCCCAC 13010 Query 125142 ATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGATTC 125201 | | ||||||||||||| ||||||||| ||||||||||| || ||| | || ||| Sbjct 13011 GTCCTCGCCTTCTTTGCCGCCTCCGATGGCATCGTCAACGAGAACCTGGTCGAGCGTTTC 13070 Query 125202 TCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATTGAG 125261 || || | || || |||| | ||||| ||||| ||||| |||||||| ||| Sbjct 13071 TCCAGCGAAGTACAGATACCCGAGGCGCGTTGCTTCTACGGCTTCCAGATCATGATGGAG 13130 Query 125262 AACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC---GCAA 125318 ||||| ||||| || | |||||| || || |||| |||||| |||| || ||| Sbjct 13131 AACGTCCACTCTGAGACTTACTCTCTGCTCATCGACACCTACATTAGCGAGCCTAGGCAG 13190 Query 125319 CGTAAACACATGCTCTTTAACGCAATCGAC-ACGGT---------------GC------- 125355 || | || || || ||||| |||||| || || || Sbjct 13191 CGCCAGTAC---CTGTTCAACGCTATCGACAACAGTAAGTTACCCCACAACGCGCTTCAA 13247 Query 125356 ------CGTCT--------------------ATACGTAAAAAGGCTCAATGGGTGATTCG 125389 ||||| || || || ||||| | |||| | || Sbjct 13248 TTTACGCGTCTAACGCGTCATAGTTCCCTGCATCCGCAAGAAGGCCGACTGGGCCCTGCG 13307 Query 125390 GTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGA 125449 |||||| ||| | || || | | |||| | | || || || ||||| || || || Sbjct 13308 ATGGATCTCGGACAAGAACTCCACTTTCGCCAGCCGTCTTGTCGCGTTCGCTGCTGTTGA 13367 Query 125450 GGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCAT 125509 ||| ||||||||| ||| || || ||||||| ||| | |||||||| || || || Sbjct 13368 GGGTATCTTCTTTAGCGGTTCGTTCGCATCCATCTTCTGGTTGAAGAAGCGTGGCCTAAT 13427 Query 125510 GCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTT 125569 ||| || || || | |||||| | || ||||| || |||||| | ||| |||||| Sbjct 13428 GCCTGGCCTTACCTTCTCCAACGAGCTCATCTCTCGTGATGAGGGCATGCACACTGACTT 13487 Query 125570 TGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGT 125629 ||| || || || || ||| || | | | | ||||| | || || Sbjct 13488 CGCCTGCCTGCTCTT------CTCTCT---TCTCAACACCCGCCCCAGCAAGGAGGCCGT 13538 Query 125630 CATCAA--CATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTA 125687 | ||| ||| | ||||| || || ||| || |||||||| || | ||| | || Sbjct 13539 C--CAAGCCATCATCACCGAGGCTGTTCAGATTGAGCAAGAGTTCCTCAGCGACGCTCTG 13596 Query 125688 CCGGTCAGC-ATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGC 125746 || | || || | ||||||||| |||||| |||||| ||||||| |||||||| || Sbjct 13597 CC-CTGTGCTCTGCTCGGCATGAACGCCAAGCTCATGTGCCAGTACATTGAGTTTGTCGC 13655 Query 125747 AGATCGTCTACTGTACGAGTTGATTGGCCGCAAGATTTACAACGCCAAGAATCCCTTTGA 125806 |||||||| ||| || ||| | |||| ||||| |||||| || |||||||| Sbjct 13656 TGATCGTCTGCTGCTCGCATTGGGCAACACCAAGGTTTACCACGCCACCAACCCCTTTGA 13715 Query 125807 TTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTCGAGAAG 125855 |||||| | ||| || || | || ||||||||||| ||||||||| Sbjct 13716 CTTCATGGAGAACATCTCGCTTGCTGGCAAGACCAACTTCTTCGAGAAG 13764 >seq188 Length=237477 Score = 188 bits (208), Expect = 1e-42 Identities = 349/504 (69%), Gaps = 6/504 (1%) Strand=Plus/Plus Query 96834 CCAATGCTCAGAATGTACAATG-CAATGTCACGATACGTTACACAGGGCGGCAATAAACG 96892 || |||||| | | |||||| || || | || ||||| ||||| ||||| || || Sbjct 167463 CCTATGCTCCGTGTATACAATAACACTG-CTCGTTACGTCGACCAGGGTGGCAACAAGCG 167521 Query 96893 GCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTTTATCGA 96952 ||||| || | ||| ||||| | || || |||||||| ||| | |||| ||| |||| Sbjct 167522 TCCAGGTGCCTTTGCCATCTACCTCGAGCCATGGCACGCTGACATCTTTGGCTTCCTCGA 167581 Query 96953 GATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTATGCACTCTG 97012 | ||||| ||| ||| || |||| || ||| | || | || || || || || Sbjct 167582 CCTCCGCAAGAACCACGGCAAGGAGGAGGTTCGCGCCCGTGATCTCTTCTACGCTCTGTG 167641 Query 97013 GGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTACTGGAGCCTAATGTGCCC 97072 | | || ||| ||||||||||||| ||| | || ||| | |||| || |||||||| Sbjct 167642 GATTCCCGATCTGTTCATGAAGCGTGTCCAAGAGAACGGCGAGTGGACTCTCATGTGCCC 167701 Query 97073 CGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGAGGCCAAGTACACGGC 97132 | || || || || ||| | ||| || ||||| ||||||||||| |||| | Sbjct 167702 CAACGAGTGCCCTGGCCTGGCTGATGTCTACGGCGAGGAGTTTGAGGCGCTGTACGAGAG 167761 Query 97133 CTACGAGCAAGAGGGC-CGATACGTGAGACGAGTCGATGCACGAGAA-CTGTGGAAGGCC 97190 ||||||| | || | | |||||||| ||| || | |||| |||||| | ||| Sbjct 167762 CTACGAGAAGCAGAACAAGGGCCGTGAGAC-TGTCCGCGC-CCAGAAGCTGTGGTATGCC 167819 Query 97191 ATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGATACCGTGAAT 97250 || | ||| ||| |||||||| | ||| | ||| |||||||||||| | || Sbjct 167820 ATTCTCGAGGCCCAGACCGAGACTGGTAATCCCTTCATGCTCTACAAGGATGCTTGCAAC 167879 Query 97251 CGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGCACGGAAATT 97310 ||||| |||||||| || |||| ||||| ||||||| ||||||||||||||| Sbjct 167880 CGCAAGAGCAACCAGAAGAACCTGGGTACCATTCGCAGCTCCAACCTGTGCACGGAAATT 167939 Query 97311 GTAGAGTACGCCTCTCCGGACGAG 97334 | |||||| | | || |||||| Sbjct 167940 ATCGAGTACACTGCCCCTGACGAG 167963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741055735548240