Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01- 12] 374 sequences; 33,379,470 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq290 95.1 1e-14 >seq290 Length=256071 Score = 95.1 bits (104), Expect = 1e-14 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||| ||| | || ||||||||||| | ||| || ||| || ||| || || Sbjct 202392 ACCAGGTGGAGGGTGGATTCCTTTTGAATGTTGTAGTCGGACAGGGTGCGACCGTCTTCA 202333 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 ||||| || ||| ||||||| || | ||||| ||||| |||||||| || ||||| | | Sbjct 202332 AGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGA 202273 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || | |||||| | ||| |||||| | | ||||| || | ||||||||| || Sbjct 202272 ATCTTGGTCTTGACATTGTCGATAGTGTCGGAGGACTCGACCTCGAGCGTGATGGTCTTG 202213 Query 94979 CCAGT 94983 || || Sbjct 202212 CCGGT 202208 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 94805 TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGT 94864 |||| |||||| ||||| || | ||| || ||| || |||| | |||||| ||||| Sbjct 202669 TGCAGAGTAGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGGCCATCCTCGAGCTGC 202610 Query 94865 TTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTT 94924 || ||| | || || | | ||||| ||||||||||| || || ||||| | || ||| Sbjct 202609 TTGCCGGCGAAAATCAGGCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGGATCTTT 202550 Query 94925 GCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGT 94983 | ||||||| | ||| ||||| | || || || | |||||||| || || || Sbjct 202549 GTCTTGACGTTGTCGATCGTGTCGGATGACTCAACCTCGAGTGTGATGGTCTTGCCGGT 202491 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||||||| | ||| || ||||| || | ||| || || | ||| | || || Sbjct 202904 CACCAAGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTACGGCCGTCTTC 202845 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 || ||| || || | || || | | ||||| ||||| || || || || ||||| | Sbjct 202844 CAACTGCTTACCAGCGAAAATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTG 202785 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || ||||||||| | | | ||| || | ||||| |||| |||||||| || Sbjct 202784 GATCTTGGCCTTGACGTTGTCAATAGTATCCGAAGACTCGACCTCAAGAGTGATGGTCTT 202725 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||||| | || || || ||||||||||| Sbjct 202724 TCCAGTCAATGTCTTGACGAAGATCTGCAT 202695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448289104238640