Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01- 12] 374 sequences; 33,379,470 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq345 194 3e-45 seq20 181 2e-41 >seq345 Length=102474 Score = 194 bits (214), Expect = 3e-45 Identities = 209/274 (76%), Gaps = 2/274 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| || | ||| |||||| || |||||||| || ||||||||||| || || Sbjct 6962 GCCAAGCGTCACCGAAAGAT-TCTTCGTGACAACATCCAGGGTATCACCAAGCCCGCCAT 6904 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||||||| |||||||||||||| ||||||||| |||| | || |||| || |||| Sbjct 6903 CCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCGGCCATGATCTACGAGGAGAC 6844 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| ||| | |||| ||||||| ||| ||| |||| |||||| || || || || Sbjct 6843 CCGTGGTGTCCTCAAGACCTTCCTCGAGAGCGTCATCCGCGATGCTGTCACATACACTGA 6784 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||| |||||||| | || ||||||| || | || || || || Sbjct 6783 GCACGCCAAGCGCAAGACCGTCACCTCGCTCGACGTCGTCTACGCCCTCAAGCGCCAGGG 6724 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCTTCT 16705 ||||| | || || || || ||||| ||||| Sbjct 6723 CCGTACCCTCTACGGCTTCGGTGGTTAAGCTTCT 6690 >seq20 Length=70013 Score = 181 bits (200), Expect = 2e-41 Identities = 188/244 (77%), Gaps = 2/244 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| ||| |||||| || |||||||| || ||||||||||| |||| Sbjct 63810 CGCCAAGCGTCACCGCAAGAT-TCTTCGCGACAACATCCAGGGTATCACCAAGCCCGCTA 63868 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||| ||||| ||||||||||| || ||||||||| |||||| || |||| || |||| Sbjct 63869 TCCGCCGTCTCGCTCGTCGTGGCGGTGTCAAGCGTATCTCTGCCATGATCTACGAGGAGA 63928 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 || | ||| | |||| ||||||| || || |||| ||| || || ||| || | Sbjct 63929 CCCGCGGTGTCCTCAAGACCTTCCTCGAGGGTGTCATCCGTGACGCCGTCACCTACACTG 63988 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || || ||||| ||||||||| | || | ||||| || | || || |||| Sbjct 63989 AGCACGCCAAGCGCAAGACCGTCACCTCCCTCGACGTTGTCTACGCCCTCAAGCGACAAG 64048 Query 16671 GCCG 16674 |||| Sbjct 64049 GCCG 64052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074858049182