Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01-
12] 374 sequences; 33,379,470 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq345 194 3e-45
seq20 181 2e-41
>seq345
Length=102474
Score = 194 bits (214), Expect = 3e-45
Identities = 209/274 (76%), Gaps = 2/274 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| || | ||| |||||| || |||||||| || ||||||||||| || ||
Sbjct 6962 GCCAAGCGTCACCGAAAGAT-TCTTCGTGACAACATCCAGGGTATCACCAAGCCCGCCAT 6904
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||||||||| |||||||||||||| ||||||||| |||| | || |||| || ||||
Sbjct 6903 CCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCGGCCATGATCTACGAGGAGAC 6844
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|||| ||| | |||| ||||||| ||| ||| |||| |||||| || || || ||
Sbjct 6843 CCGTGGTGTCCTCAAGACCTTCCTCGAGAGCGTCATCCGCGATGCTGTCACATACACTGA 6784
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || || ||||| |||||||| | || ||||||| || | || || || ||
Sbjct 6783 GCACGCCAAGCGCAAGACCGTCACCTCGCTCGACGTCGTCTACGCCCTCAAGCGCCAGGG 6724
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCTTCT 16705
||||| | || || || || ||||| |||||
Sbjct 6723 CCGTACCCTCTACGGCTTCGGTGGTTAAGCTTCT 6690
>seq20
Length=70013
Score = 181 bits (200), Expect = 2e-41
Identities = 188/244 (77%), Gaps = 2/244 (1%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| |||||||| |||| ||| |||||| || |||||||| || ||||||||||| ||||
Sbjct 63810 CGCCAAGCGTCACCGCAAGAT-TCTTCGCGACAACATCCAGGGTATCACCAAGCCCGCTA 63868
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|||| ||||| ||||||||||| || ||||||||| |||||| || |||| || ||||
Sbjct 63869 TCCGCCGTCTCGCTCGTCGTGGCGGTGTCAAGCGTATCTCTGCCATGATCTACGAGGAGA 63928
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|| | ||| | |||| ||||||| || || |||| ||| || || ||| || |
Sbjct 63929 CCCGCGGTGTCCTCAAGACCTTCCTCGAGGGTGTCATCCGTGACGCCGTCACCTACACTG 63988
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
||||||| || || ||||| ||||||||| | || | ||||| || | || || ||||
Sbjct 63989 AGCACGCCAAGCGCAAGACCGTCACCTCCCTCGACGTTGTCTACGCCCTCAAGCGACAAG 64048
Query 16671 GCCG 16674
||||
Sbjct 64049 GCCG 64052
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074858049182
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |