Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01-
12] 374 sequences; 33,379,470 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq158 140 2e-28
seq55 140 2e-28
seq97 107 1e-18
>seq158
Length=12036
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 1489 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 1548
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 1549 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 1583
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 9283 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 9342
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 9343 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 9377
>seq55
Length=10633
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 4148 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 4089
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 4088 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 4054
>seq97
Length=116226
Score = 107 bits (118), Expect = 1e-18
Identities = 196/287 (68%), Gaps = 0/287 (0%)
Strand=Plus/Minus
Query 6201 TTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATT 6260
|||||||||||||| ||| ||| ||| ||||| | || || ||||| ||||| ||
Sbjct 31942 TTCTACCGCTACAAGATGGAGCGTATCCAGTCCAAGATTGAAGGCAAGGGTAACGGCATC 31883
Query 6261 AAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCTAC 6320
|| || |||||||||||| || |||||| | |||| |||||| || | ||
Sbjct 31882 AAGACTGTCATTGTCAACCTGAGCAGTGTCGCTGGCTCACTCGCCCGCCCTCCCGCTCAC 31823
Query 6321 CCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAG 6380
| || || || || | ||| |||||||| ||||| | | | ||| ||||
Sbjct 31822 GTCATCAAGTACTTTGGTTTCGAGCTTGGCGCCCAGACAAACACTAGCCCCAACGACGAC 31763
Query 6381 CGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTTT 6440
|| | ||| | ||||| | || | | |||||||||||||| || ||||||||
Sbjct 31762 CGTTGGATCATCAACGGCGCCCACGATGCCAGCAAGCTGCAGGACTATCTCGACGGCTTC 31703
Query 6441 ATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487
||| |||||| || || || | ||||| | ||||| || |||||
Sbjct 31702 ATTGCCAAGTTCGTCCTCTGCAAGAAATGCAAGAACCCAGAAACCGA 31656
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334945673268794
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |