Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01- 12] 374 sequences; 33,379,470 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq158 140 2e-28 seq55 140 2e-28 seq97 107 1e-18 >seq158 Length=12036 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 1489 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 1548 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 1549 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 1583 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 9283 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 9342 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 9343 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 9377 >seq55 Length=10633 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 4148 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 4089 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 4088 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 4054 >seq97 Length=116226 Score = 107 bits (118), Expect = 1e-18 Identities = 196/287 (68%), Gaps = 0/287 (0%) Strand=Plus/Minus Query 6201 TTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATT 6260 |||||||||||||| ||| ||| ||| ||||| | || || ||||| ||||| || Sbjct 31942 TTCTACCGCTACAAGATGGAGCGTATCCAGTCCAAGATTGAAGGCAAGGGTAACGGCATC 31883 Query 6261 AAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCTAC 6320 || || |||||||||||| || |||||| | |||| |||||| || | || Sbjct 31882 AAGACTGTCATTGTCAACCTGAGCAGTGTCGCTGGCTCACTCGCCCGCCCTCCCGCTCAC 31823 Query 6321 CCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAG 6380 | || || || || | ||| |||||||| ||||| | | | ||| |||| Sbjct 31822 GTCATCAAGTACTTTGGTTTCGAGCTTGGCGCCCAGACAAACACTAGCCCCAACGACGAC 31763 Query 6381 CGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTTT 6440 || | ||| | ||||| | || | | |||||||||||||| || |||||||| Sbjct 31762 CGTTGGATCATCAACGGCGCCCACGATGCCAGCAAGCTGCAGGACTATCTCGACGGCTTC 31703 Query 6441 ATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487 ||| |||||| || || || | ||||| | ||||| || ||||| Sbjct 31702 ATTGCCAAGTTCGTCCTCTGCAAGAAATGCAAGAACCCAGAAACCGA 31656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334945673268794