Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01- 12] 374 sequences; 33,379,470 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq154 122 1e-22 >seq154 Length=40832 Score = 122 bits (134), Expect = 1e-22 Identities = 234/338 (69%), Gaps = 13/338 (4%) Strand=Plus/Minus Query 93313 TAGTGTT-TCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCG--TATGTATGT 93369 || |||| ||||||||||| || ||||| || || | || | |||| ||||| || Sbjct 13224 TACTGTTGTCGATAGCGTTGAACAGGTA--CTGGCGCTGCCTAGGCTCGCTAATGTAGGT 13167 Query 93370 ATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTA 93429 ||||| | |||||| || | ||||| ||||| |||||||| || ||||| ||||| Sbjct 13166 GTCGATGAGCAGAGAGTAAGTCTCAGAGTGGACGTTCTCCATCATGATCTGGAAGCCGTA 13107 Query 93430 GAAACATCTAGCTTCCGTGATCTGCACTT--CTTGAGAAAATCTCTCTACGAGATTTTCA 93487 ||| || | || || | ||||| |||| || |||||| | ||| || || || || Sbjct 13106 GAAGCAACGCGCCTCGGGTATCTGTACTTCGCTGGAGAAA--CGCTCGACCAGGTTCTCG 13049 Query 93488 TTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCA 93547 ||||| || |||||||| || ||||| || || | | || || ||| ||| Sbjct 13048 TTGACGATGCCATCGGAGGCGGCAAAGAAGGCGAGGACGTGGGAGATGAAAAAGCGCTCG 12989 Query 93548 TCATCTTTAA---GCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACA 93604 || || || | |||| | ||| ||| ||||| || || ||||| | || ||| | Sbjct 12988 TCGTCGTTCAGGCGCTTGTTCCAGTCGTGAAGATCCTTGGAGAGATCAATCTCCTCGGCG 12929 Query 93605 GTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCA 93642 ||||| || || || || || || |||||||| | ||| Sbjct 12928 GTCCAGAAAGA-GCCTCGGCCTTCTTGTACATTTGCCA 12892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556858196675760