Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01-
12] 374 sequences; 33,379,470 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq290 161 2e-34
seq214 109 1e-18
seq154 105 1e-17
>seq290
Length=256071
Score = 161 bits (178), Expect = 2e-34
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | |||||||| || || ||||| || |||||||| || || |||
Sbjct 202921 CCACCACGCAGACGGAGCACCAAGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCCGAG 202862
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || ||||| |||||||| || ||||| ||||| | || ||||| || ||
Sbjct 202861 AGAGTACGGCCGTCTTCCAACTGCTTACCAGCGAAAATGAGACGCTGCTGGTCTGGGGGG 202802
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| ||||||||||| ||||| ||||||||| || || || || | || || ||
Sbjct 202801 ATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCAATAGTATCCGAAGACTCGACC 202742
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||||| ||||| || | ||||||||||| ||||||||
Sbjct 202741 TCAAGAGTGATGGTCTTTCCAGTCAATGTCTTGACGAAGATCTGCAT 202695
>seq214
Length=233559
Score = 109 bits (120), Expect = 1e-18
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 225436 GCACACTGCGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAG 225495
||| ||| | || ||||| ||||||||||| || ||||| | | | || | | |
Sbjct 86215 GCAGACTTCATCGAGGAAACCAGAGTCGTGTGAGACAATCAAGCTGGTGACCTCACTGTG 86156
Query 225496 GCCCTTGAGGTGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTC 225555
|||||||| | | ||||||||| |||||| ||| |||| |||||| || |||||
Sbjct 86155 AGACTTGAGGTACTTTGCGAGCCATGCAACGTTGGCGACATCCAAGTGGTTAGTGGGTTC 86096
Query 225556 GTCCAGAAGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTT 225615
||| ||||| || | ||| || || || |||||||| | | || ||||||||| ||
Sbjct 86095 GTCGAGAAGAAGCACGTCGGCTCGCATAAGCATGGCGCGAGCCAAAGCCAGCTTCATCTT 86036
Query 225616 CCAGCCCCCGGACAGGGAGCCGA 225638
||| || || ||||| || ||||
Sbjct 86035 CCAACCTCCAGACAGAGAACCGA 86013
>seq154
Length=40832
Score = 105 bits (116), Expect = 1e-17
Identities = 153/214 (71%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
|||||| || ||||||||||| || || || |||||||||||||| |||||| |
Sbjct 13797 CATGACACCAGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGC 13738
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGC--GCCAAACTGCTTGGGGTAA 10052
|| || ||| ||||||||||||||||||||| ||| | |||| ||||| ||
Sbjct 13737 AAGCGAGATGTTCTCCATGAAGTCAAAGGGGTTGGTGGCGTGGTAAAC--CTTGGTGTTG 13680
Query 10053 CCGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAG 10112
|| | ||| | | || ||||| || ||||| |||||||||| ||| || | | |
Sbjct 13679 CCCAATGCGAGCAGCAGACGATCAGCGACAAACTCAATGTACTGGCACATGAGCTTGGCG 13620
Query 10113 TTCATGCCAATCATGCGGCAGGGGATGGCGTCGC 10146
|||||||| | || ||||| | |||||||
Sbjct 13619 TTCATGCCGAGCAGAGCACAGGGCAGAGCGTCGC 13586
Score = 93.3 bits (102), Expect = 8e-14
Identities = 123/169 (73%), Gaps = 9/169 (5%)
Strand=Plus/Minus
Query 10622 CAGGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAA 10681
||||||||| | || ||||||||| | | ||||||||| |||||| ||| ||||||
Sbjct 13058 CAGGTTCTCGTTGACGATGCCATCGGAGGCGGCAAAGAAGGCGAGGACGTGGGAGATGAA 12999
Query 10682 GTGGCGCTCATCATCGTTCAG----TTTTTCACGCCAGTCTACCACATCCTGGTTGAGCT 10737
|||||| || |||||||| || ||| ||||| | ||||| | ||| |
Sbjct 12998 AAAGCGCTCGTCGTCGTTCAGGCGCTTGTTC----CAGTCGTGAAGATCCTTGGAGAGAT 12943
Query 10738 GGACCTCCTCCACGGTCCAGAAAGTGGCAACGGCCTTCTTGTACATCTG 10786
| |||||| |||||||||||| | | |||||||||||||||| ||
Sbjct 12942 CAATCTCCTCGGCGGTCCAGAAAGAGCCT-CGGCCTTCTTGTACATTTG 12895
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921618091415280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |