Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01- 12] 374 sequences; 33,379,470 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq188 316 4e-81 seq154 224 2e-53 >seq188 Length=237477 Score = 316 bits (350), Expect = 4e-81 Identities = 1111/1714 (65%), Gaps = 63/1714 (4%) Strand=Plus/Minus Query 243741 TGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTC 243800 ||||||| | ||| || ||| ||| |||| | || ||||||||||| |||||||| | Sbjct 168897 TGAACTGAATGGGAGCAGAGGCAGCCATGGTACGGAGATAGTACATGCCTGTCTTGAGAC 168838 Query 243801 CACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGT 243860 || ||| || | |||||||| || | ||| ||| || ||| Sbjct 168837 CAAGCTTCCATCCGGCAAAGTGCATGGAGGTGATCTTGCCCATGGTGGGCT--------- 168787 Query 243861 CCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGG 243920 ||| || || |||||| |||||| |||||| | ||||| | || || || | Sbjct 168786 CCTT---CATGTGGATGTTGAGTGACTGGGACTGGTCAATGAAGGCACCACGGTCGGCAG 168730 Query 243921 CCATGGTGATGA-GGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGG 243979 |||| ||| | ||| | ||| || || || | | || ||||||| || |||| Sbjct 168729 CCATCTGGATAATGGTTCG-CTGCGAGATTTCCCAAACAGTTTTGTAGAGGGTCTTGGTC 168671 Query 243980 TGCTCGGGGAACCCTTCGATGTTCTGC--ACCGAGCCCTTGTGGACGATGAGCTGGGTGC 244037 | ||| |||| || | | ||| | ||||| | | |||||| || | Sbjct 168670 TCCTCAGGGATA--TTGGGGATCCTGGCAATGGAGCCACCCTCGGCGATGATACGGTTCT 168613 Query 244038 GCATGTTATCGTTCCACAGGCCCA-AGCGCTCCAGCGCCTCGACCAGGTGCCTGTTCACC 244096 |||||| || ||||||||||| | || | || ||| || || ||| || Sbjct 168612 TCATGTTCTCAGACCACAGGCCCATATCGA-CAAGGTCCTTGAGCAACCATGGGTTGACG 168554 Query 244097 ACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATG 244156 ||||| ||||| |||| ||||| ||||| ||||| |||| | || ||||||| | Sbjct 168553 ACCTGGAACTCACCCGCGAGCACACGGCGTGAGTAGATGTTGGAGGTGTAGGGCTCGAAG 168494 Query 244157 CTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGA 244216 | ||| |||| || || ||||| | || ||||| ||||| || | | |||||| Sbjct 168493 CACTCATTGTTTCCGAGAATCTGAGAGGTCGAGGCAGTTGGCATAGGTGCAATCAGCAGC 168434 Query 244217 CTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGC--TCGTTCCAGTCCCACATGC 244274 ||| | || |||||| || ||| ||| || || | ||| |||| | Sbjct 168433 GAGTTGCGGACACCGTGCT----GA-GCGA--TCTTGGCCTTCAGTTCAG-CCCA---GT 168385 Query 244275 CCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGG 244334 || |||| || | | | | | |||||||||| |||| || | |||| ||||| Sbjct 168384 CCCAGAGATCGGTGGGGGTAACGTTCCACATGTCATACTGAAGGATACCCTGTGAGACGG 168325 Query 244335 GGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGA 244394 || |||||||||||| ||| ||||| || ||| | | ||| | | Sbjct 168324 GGGATCCCTCGTAGGTCTCGTAAGGACCAAGCTCCTTGGCAATGTCGCAGGAGGAGGTCA 168265 Query 244395 GGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGG 244454 | || || | ||||||||||||||||||| |||| | | ||||| | | | Sbjct 168264 GAGCAGCATGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCGGCCGACT 168205 Query 244455 TGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGG 244514 ||| || | || || | ||| | || ||||| || ||||| || || || |||| Sbjct 168204 CGAATGGCAGGCGCAGTGCGAGGAAAGCATCAGCCAGACCTTGCACACCCATACCAATGG 168145 Query 244515 GTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCA 244574 ||| ||| || |||| ||| || || |||||||| |||| | || || | Sbjct 168144 GTCGGTGGCGGAAGTTGCTGCGGCGCGCCTCCTCGACGGGGTAGTGGTTGACATCAATGA 168085 Query 244575 CCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACT 244634 |||||| | |||||| |||| | || ||| ||| ||| || ||||| ||| Sbjct 168084 TCTTGTTCAAGTTGCGAGTGACAACCTGGGTGACCTCGTGGAGCTTCTTGAAGTCAAACT 168025 Query 244635 CGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGT 244694 | || ||| | || || ||||| ||||| | | ||||| || Sbjct 168024 C----------TCCGCGCTTGTAGTCG--ACAAAGGAAGGCAGGGCAAGGGAGGCCAAGT 167977 Query 244695 TGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGC 244754 ||||||| || ||||| || | | ||||||| || ||| || ||||| ||||| || Sbjct 167976 TGCAGACAGCGACCTCGTCAGGGGCAGTGTACTCGATAATTTCCGTGCACAGGTTGGAGC 167917 Query 244755 ACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCA 244814 ||||| ||||||| || || ||| |||| |||||| || ||||||||||||| Sbjct 167916 TGCGAATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTAGAGCA 167857 Query 244815 TGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCT 244874 ||||||| || |||||| |||||| |||| | | | ||| || | | || Sbjct 167856 TGAAGGGATTACCAGTCTCGGTCTGGGCCTCGAGAATGGCATACCACAGCTTCTGGGCGC 167797 Query 244875 TGACCGTCCTGCGAGCCTTGCCCTCTGC--CTCGTAGCGGGTGTACAGGGCCTCGAACTC 244932 ||| ||| || ||||| ||||| |||||||| |||||| ||||| ||||| Sbjct 167796 GGACAGTCTCACGGCCCTTGT--TCTGCTTCTCGTAGCTCTCGTACAGCGCCTCAAACTC 167739 Query 244933 GGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCC 244992 ||| |||| || | ||||| |||||| |||||||||||| |||||||||| Sbjct 167738 CTCGCCGTAGACATCAGCCAGGCCAGGGCACTCGTTGGGGCACATGAGAGTCCACTCGCC 167679 Query 244993 GCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCT 245052 | || | ||| | || |||||| || ||||| ||||| || || | |||||| || | Sbjct 167678 GTTCTCTTGGACACGCTTCATGAACAGATCGGGAATCCACAGAGCGTAGAAGAGATCACG 167619 Query 245053 GGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGAC 245112 || | ||| ||| ||| |||||| | || || | ||| |||||| ||| | Sbjct 167618 GGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAAGCCAAAGATGTCAGC 167559 Query 245113 GTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCAC 245172 |||||| ||||| | ||||| || | ||| || || ||||||||||| |||||||| | Sbjct 167558 GTGCCATGGCTCGAGGTAGATGGCAAAGGCACCTGGACGCTTGTTGCCACCCTGGTCGA- 167500 Query 245173 CATCCTCTCGAGC-GCG---TTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGC 245228 | | ||||| | | ||| | | || || |||| | | ||||| || | Sbjct 167499 ---CGTAACGAGCAGTGTTATTGTATACACGGAGCATAGGGATAAGACCGTTTGATGTTC 167443 Query 245229 CGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGA--GGTTGCTGATGGACATGCCTAG 245286 |||||||||| ||||| | ||| || | | || | ||| | || | || | Sbjct 167442 CGTTGGTGCCGCCAATGTATGAGCCGGTGGCACGGATTCGGTGCACGTTGAGA--CCAAT 167385 Query 245287 TCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCAT 245346 ||||| ||| ||||||||| | ||| || |||||| ||||| ||||| || || Sbjct 167384 ACCGCCAGCGGTCTTGGAGATCAAGGCACACGTCTTGAGAGTGTCGTAGATGCCGTCAAT 167325 Query 245347 GCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTG-GGGCTTGGGGCTGCACG 245405 ||| ||| ||||||| || || ||||||||||||| ||| ||| ||| | | | | Sbjct 167324 GCTATCCTCTTTCATGTCGATAAGGAAGCAGGAGGACATCTGAGGGGATGGAG-TACCGG 167266 Query 245406 AGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTA 245439 |||||||| || || |||||| || ||||| Sbjct 167265 CATTGAACAGCGTCGGTGAGGCGTGTGTGAAGTA 167232 >seq154 Length=40832 Score = 224 bits (248), Expect = 2e-53 Identities = 367/518 (71%), Gaps = 13/518 (3%) Strand=Plus/Plus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGA-CGCAAC 42691 ||||||||| |||||||| |||||||| || |||||| | | | || | | || Sbjct 13273 CCCTGCATCCGCAAGAAGGCCGACTGGGCCCTGCGATGGATCTCG-GACAAGAACTCCAC 13331 Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751 |||| | | || || || || | || || ||||| |||||||| || | || Sbjct 13332 TTTCGCCAGCCGTCTTGTCGCGTTCGCTGCTGTTGAGGGTATCTTCTTTAGCGGTTCGTT 13391 Query 42752 CGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCG--ATGCCCGGACTCACCTTCTCGAAC 42809 ||| |||||||||||| | ||| || ||| | ||||| || || |||||||| ||| Sbjct 13392 CGCATCCATCTTCTGGTTGAAGAAGC--GTGGCCTAATGCCTGGCCTTACCTTCTCCAAC 13449 Query 42810 GAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGC 42869 || |||||| | || ||||| |||| | ||||| |||||||| || ||||| Sbjct 13450 GAGCTCATCTCTCGTGATGAGGGCATGCACACTGACTTCGCCTGCCTGCTCTTCTCT--- 13506 Query 42870 CACCTCAGGCACAAGCCCTCG-AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGA 42928 | |||| ||| |||| | |||||| |||| ||||||||||| ||||| || | Sbjct 13507 CTTCTCAA-CACCCGCCCCAGCAAGGAGGCCGTCCAAGCCATCATCACCGAGGCTGTTCA 13565 Query 42929 GATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCC-GTGTCCCTGGTCGGCATGAACCACG 42987 ||| ||| | |||||||||| | | |||||| ||| | ||| ||||||||||| | Sbjct 13566 GATTGAGCAAGAGTTCCTCAGCGACGCTCTGCCCTGTG-CTCTGCTCGGCATGAACGCCA 13624 Query 42988 ACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCA 43047 | ||||||||| ||||||| ||| ||||| || | ||| ||| | |||| || Sbjct 13625 AGCTCATGTGCCAGTACATTGAGTTTGTCGCTGATCGTCTGCTGCTCGCATTGGGCAACA 13684 Query 43048 GCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCA 43107 | | ||| || | | |||||| ||||| ||||||||||||||| | | |||| Sbjct 13685 CCAAGGTTTACCACGCCACCAACCCCTTTGACTTCATGGAGAACATCTCGCTTGCTGGCA 13744 Query 43108 AGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 |||||||||| ||||||||||| |||| ||||||||| Sbjct 13745 AGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAG 13782 Score = 123 bits (136), Expect = 5e-23 Identities = 185/258 (72%), Gaps = 6/258 (2%) Strand=Plus/Plus Query 42301 TCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGG 42360 ||||| |||||||||||||| || ||| ||||||||||||||||||||| || Sbjct 12890 TCTGGCAAATGTACAAGAAGGCCGAGG-CTCTTTCTGGACCGCCGAGGAGATTGATCTCT 12948 Query 42361 CCAAGGACACGGCCGGCTGGGA---GTCACTGTCTGAGAACGAAAAGTTTTTCCTCAAAA 42417 ||||||| || |||| | | ||| || |||| |||||| || Sbjct 12949 CCAAGGATCTTCACGACTGGAACAAGCGCCTGAACGACGACGAGCGCTTTTTCATCTCCC 13008 Query 42418 ACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGT 42477 || | || |||||||| |||||||| || ||||| ||||| |||||||||| | | | Sbjct 13009 ACGTCCTCGCCTTCTTTGCCGCCTCCGATGGCATCGTCAACGAGAACCTGGTCGAGCGTT 13068 Query 42478 TCATGAAAGAGGTGCAG-TACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATA 42536 || | || || ||| ||| |||||||| |||||||||||||||||||| || Sbjct 13069 TCTCCAGCGAAGTACAGATACCC-GAGGCGCGTTGCTTCTACGGCTTCCAGATCATGATG 13127 Query 42537 GAGAACGTGCACTCTGAG 42554 |||||||| ||||||||| Sbjct 13128 GAGAACGTCCACTCTGAG 13145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944334785214240