Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01-
12] 374 sequences; 33,379,470 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq290 120 7e-22
seq154 93.3 1e-13
>seq290
Length=256071
Score = 120 bits (132), Expect = 7e-22
Identities = 141/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||| | |||||| | || || || | ||| || || || |||
Sbjct 203113 TCCTTCTGGATGTTGTAGTCCGAGAGCGTCCTGCCATCCTCGAGTTGCTTACCAGCAAAG 203054
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| |||||||| || ||||| || || || |||||||| || | ||||||||
Sbjct 203053 ATGAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGTCTTCACGTTG 202994
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | |||||||||||| || || | ||||| ||||| ||||| || ||||| |||
Sbjct 202993 TCAATGGTATCGCTCGATTCCACCTCCAATGTGATTGTCTTGCCGGTAAGGGTCTTCACG 202934
Query 288463 AATATCTGCAT 288473
|| || |||||
Sbjct 202933 AAGATTTGCAT 202923
Score = 116 bits (128), Expect = 9e-21
Identities = 143/194 (74%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||| | ||| || || |||||||| || || || || |||||
Sbjct 202885 TCCTTCTGGATGTTGTAGTCCGAGAGAGTACGGCCGTCTTCCAACTGCTTACCAGCGAAA 202826
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|| |||||||| || |||||| || || || || || ||||| || || || |||
Sbjct 202825 ATGAGACGCTGCTGG---TCTGGGGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTGACG 202769
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || |||| ||| || || || || || ||||| ||||| || |||| ||||||
Sbjct 202768 TTGTCAATAGTATCCGAAGACTCGACCTCAAGAGTGATGGTCTTTCCAGTCAATGTCTTG 202709
Query 288460 ACGAATATCTGCAT 288473
||||| ||||||||
Sbjct 202708 ACGAAGATCTGCAT 202695
Score = 98.7 bits (108), Expect = 2e-15
Identities = 146/206 (71%), Gaps = 6/206 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | || || || || | ||| ||| ||||| || || |||||||
Sbjct 202410 CCACCACGGAGGCGGAGGACCAGGTGGAGGGTGGATTCCTTTTGAATGTTGTAGTCGGAC 202351
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| |||||||| | || || || || ||||||| ||||| || ||||||
Sbjct 202350 AGGGTGCGACCGTCTTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGG---TCTGGG 202294
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| || || || ||||| || || | || || || || |||| ||| || ||
Sbjct 202293 GGAATACCCTCCTTGTCCTGAATCTTGGTCTTGACATTGTCGATAGTGTCGGAGGACTCG 202234
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGT 288449
|| ||||||||||| ||||| |||||
Sbjct 202233 ACCTCGAGCGTGATGGTCTTGCCGGT 202208
>seq154
Length=40832
Score = 93.3 bits (102), Expect = 1e-13
Identities = 157/225 (70%), Gaps = 2/225 (1%)
Strand=Plus/Plus
Query 269117 AAGAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGTATGAATGCCGATCTCATGA 269176
|||||||| | | |||||| | || ||| || || |||| ||||| ||| | ||||||
Sbjct 13574 AAGAGTTCCTCAGCGACGCTCTGCCCTGTGCTCTGCTCGGCATGAACGCCAAGCTCATGT 13633
Query 269177 ATCAATATATCGAATTCGTGGCTGATCGTAT-CTTCACGGCACTCGGTTATGAGAAAGTG 269235
|| || || || || || ||||||||| | || | || || | || | || ||
Sbjct 13634 GCCAGTACATTGAGTTTGTCGCTGATCGTCTGCTGCTCG-CATTGGGCAACACCAAGGTT 13692
Query 269236 TACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGACGAAC 269295
||| | | | || ||||| | ||| ||||| || ||||| | || ||||| |||
Sbjct 13693 TACCACGCCACCAACCCCTTTGACTTCATGGAGAACATCTCGCTTGCTGGCAAGACCAAC 13752
Query 269296 TTCTTCGAAAAGCGTGTCAGCGACTATCAACGTCCTGGTGTAATG 269340
|||||||| ||||||||| | ||||| || ||||||| |||
Sbjct 13753 TTCTTCGAGAAGCGTGTCGGTGACTACCAGAAGGCTGGTGTCATG 13797
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179648747243572
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |