Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01-
12] 374 sequences; 33,379,470 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq290 105 7e-18
seq273 87.8 2e-12
>seq290
Length=256071
Score = 105 bits (116), Expect = 7e-18
Identities = 127/173 (73%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| ||||| |||||||||||||| || | | |||||| ||||||||||||||||||||
Sbjct 202380 GTGGATTCCTTTTGAATGTTGTAGTCGGACAGGGTGCGACCGTCTTCAAGCTGCTTGCCG 202321
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | || | ||||||||||| || ||||| || || || || || || || |||
Sbjct 202320 GCAAAGATCAAGCGCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGAATCTTGGTCTTG 202261
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGT 64419
||| || | || || || || || || | || | ||||||||||||
Sbjct 202260 ACATTGTCGATAGTGTCGGAGGACTCGACCTCGAGCGTGATGGTCTTGCCGGT 202208
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || |||| | ||||| | |||| || || || || || |||||||| || |
Sbjct 202922 ACCACCACGCAGACGGAGCACCAAGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCCGA 202863
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
|| || || ||||||| | |||||| || || ||||||| ||||||||||| || ||
Sbjct 202862 GAGAGTACGGCCGTCTTCCAACTGCTTACCAGCGAAAATGAGACGCTGCTGGTCTGGGGG 202803
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| || || || ||||| || || ||| || || | ||||| | || ||
Sbjct 202802 GATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCAATAGTATCCGAAGACTCGAC 202743
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | ||| | |||||| || ||||| || || ||||| || |||||
Sbjct 202742 CTCAAGAGTGATGGTCTTTCCAGTCAATGTCTTGACGAAGATCTGCAT 202695
Score = 89.7 bits (98), Expect = 5e-13
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || ||||| | || || || || ||||||||||| || | | ||||| | ||
Sbjct 202678 AGGACGAGATGCAGAGTAGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGGCCATCC 202619
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| |||||||||||||| |||| || ||||||||||| |||||||| || || || ||
Sbjct 202618 TCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCC 202559
Query 64352 TGTATTTTTTGCTTTAC 64368
|| || ||| ||| ||
Sbjct 202558 TGGATCTTTGTCTTGAC 202542
Score = 82.4 bits (90), Expect = 8e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
|||||| || | | ||||| | || | || || || || || |||||||| || |
Sbjct 203150 ACCGCCACGAAGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGA 203091
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
|| || | | || || || ||||| || ||| | ||||| ||||||||||| |||||
Sbjct 203090 GAGCGTCCTGCCATCCTCGAGTTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGAGG 203031
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| || || || || || || || ||| || || | ||||| | | |||||
Sbjct 203030 GATACCCTCCTTGTCCTGGATCTTGGTCTTCACGTTGTCAATGGTATCGCTCGATTCCAC 202971
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | || | ||||||||||| | || || ||||| ||||||||
Sbjct 202970 CTCCAATGTGATTGTCTTGCCGGTAAGGGTCTTCACGAAGATTTGCAT 202923
>seq273
Length=368666
Score = 87.8 bits (96), Expect = 2e-12
Identities = 84/108 (78%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
||||| || || || |||||||| || | || ||||| | || |||||||||||||||
Sbjct 357137 GTCGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCCTCAAGCTGCTTGCCG 357196
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354
|| | ||||| ||||||||||| || ||||| || || || ||| ||
Sbjct 357197 GCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCTGGT 357244
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499642464160560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |