Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01- 12] 374 sequences; 33,379,470 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq188 271 8e-68 >seq188 Length=237477 Score = 271 bits (300), Expect = 8e-68 Identities = 610/911 (67%), Gaps = 4/911 (0%) Strand=Plus/Plus Query 93727 TTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGGGTTTCCGAG 93786 |||| |||||| || || ||| || ||||||||| || ||||||| |||| ||||| Sbjct 167079 TTTGGCTTCAAGACACTTGAGCGCTCATACCTCCTCCGCATAGATGGCAAGGTTGCCGAG 167138 Query 93787 CGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACATGCCGAAT 93846 || || || || |||| ||||| || || |||| || |||||| | ||||| ||| Sbjct 167139 CGCCCACAGCACATGCTCATGCGTGTTGCTGTCGGTATCCACGGCGAGGACATTGAGAAG 167198 Query 93847 GTT-TTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACCCCGACCCT 93905 | ||| | || | | ||||| | || | || ||| | ||||| || Sbjct 167199 GCCATTGAGACCTATGACT-ACATGTCACAAAAATACTTCACACACGCCTCACCGACGCT 167257 Query 93906 GTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT-GACGAACAAGG 93964 |||||| || || || || || |||||||| || || ||||| || ||| | || | Sbjct 167258 GTTCAATGCCGGTACTCCATCCCCTCAGATGTCCTCCTGCTTCCTTATCGAC-ATGAAAG 167316 Query 93965 CCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACG 94024 || ||| ||| || | ||||| |||||| ||||| ||||| || || Sbjct 167317 AGGATAGCATTGACGGCATCTACGACACTCTCAAGACGTGTGCCTTGATCTCCAAGACCG 167376 Query 94025 CGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTA 94084 | || || || || ||| || ||| | ||||||| || || ||||| |||| | Sbjct 167377 CTGGCGGTATTGGTCTCAACGTGCACCGAATCCGTGCCACCGGCTCATACATTGGCGGCA 167436 Query 94085 CCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCT 94144 |||| || || || ||||| || ||||||||||||| || | ||| ||| | || || | Sbjct 167437 CCAACGGAACATCAAACGGTCTTATCCCTATGCTCCGTGTATACAATAACACTGCTCGTT 167496 Query 94145 ACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGC 94204 |||| ||||||||||| | | | ||| | || || |||| |||||||| |||| Sbjct 167497 ACGTCGACCAGGGTGGCAACAAGCGTCCAGGTGCCTTTGCCATCTACCTCGAGCCATGGC 167556 Query 94205 ACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGG 94264 |||| ||| | | ||| ||||||| || |||||||||||||| || || | | Sbjct 167557 ACGCTGACATCTTTGGCTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAGGTTCGCG 167616 Query 94265 CCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAA 94324 || | || |||||||||||||| ||| | || || || || ||||| || ||| | | | Sbjct 167617 CCCGTGATCTCTTCTACGCTCTGTGGATTCCCGATCTGTTCATGAAGCGTGTCCAAGAGA 167676 Query 94325 ACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTGGAT 94384 || || |||| ||| | || ||||| || || || || ||| | || || | || Sbjct 167677 ACGGCGAGTGGACTCTCATGTGCCCCAACGAGTGCCCTGGCCTGGCTGATGTCTACGGCG 167736 Query 94385 CGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGGAAGGTTATGG 94444 | ||||| | |||| | | ||||| |||| ||||| | | || | | Sbjct 167737 AGGAGTTTGAGGCGCTGTACGAGAGCTACGAGAAGCAGAACAAGGGCCGTGAGACTGTCC 167796 Query 94445 ATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCCTACA 94504 || |||||||||| || || | || | ||| ||||| |||| |||| || Sbjct 167797 GCGCCCAGAAGCTGTGGTATGCCATTCTCGAGGCCCAGACCGAGACTGGTAATCCCTTCA 167856 Query 94505 TCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGATCAAGA 94564 | | | |||||| || |||| |||| ||||||| || |||| || || | Sbjct 167857 TGCTCTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTGGGTACCATTCGCA 167916 Query 94565 GCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTGTGTGTA 94624 |||| || |||||||| || ||| ||||||| ||| | || |||||| | ||||| || | Sbjct 167917 GCTCCAACCTGTGCACGGAAATTATCGAGTACACTGCCCCTGACGAGGTCGCTGTCTGCA 167976 Query 94625 ACCTGGGCTCC 94635 || ||| |||| Sbjct 167977 ACTTGGCCTCC 167987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494720887169040