Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01-
12] 374 sequences; 33,379,470 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq154 107 2e-18
seq290 100 3e-16
seq143 86.0 6e-12
>seq154
Length=40832
Score = 107 bits (118), Expect = 2e-18
Identities = 246/367 (67%), Gaps = 25/367 (7%)
Strand=Plus/Plus
Query 47223 ATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCACACCAAC 47282
||||| ||||| || || ||||||||| ||||| | || || ||| ||||||| ||
Sbjct 13426 ATGCCTGGCCTTACCTTCTCCAACGAGCTCATCTCTCGTGATGAGGGCATGCACACTGAC 13485
Query 47283 TTTGCCTG----------TCTCTACTACAACACTAGAGTCGATCAAAAGTTGGACGTGCC 47332
|| ||||| ||||| || |||||| | | | ||| ||| |
Sbjct 13486 TTCGCCTGCCTGCTCTTCTCTCTTCT-CAACACCCGCCCC-AGCAA-----GGAGG---- 13534
Query 47333 CACCGTCAGCGACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGC 47392
||||| | ||| | |||| || || |||||| ||||| || ||| ||
Sbjct 13535 --CCGTCCAAGCCATCATCACCGAGGCTGTTCAGATTGAGCAAGAGTTCCTCAGCGACGC 13592
Query 47393 TCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGT 47452
||||||| || | | || |||||||| || | ||| | ||||||| || |||||
Sbjct 13593 TCTGCCCTGTGCTCTGCTCGGCATGAACGCCAAGCTCATGTGCCAGTACATTGAGTTTGT 13652
Query 47453 CGCCGACCGCCTGCTCGTTCAGCTAAAGTATC-CCAAGATTTACCACACCGAGAATCCAT 47511
||| || || ||||| | || | | | | ||||| |||||||| || || || |
Sbjct 13653 CGCTGATCGTCTGCT-GCTCGCATTGGGCAACACCAAGGTTTACCACGCCACCAACCCCT 13711
Query 47512 TCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCG 47571
| || || ||| | ||||| ||||| | |||||||||||||| ||||||||||| ||||
Sbjct 13712 TTGACTTCATGGAGAACATCTCGCTTGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCG 13771
Query 47572 GCGAATA 47578
| || ||
Sbjct 13772 GTGACTA 13778
>seq290
Length=256071
Score = 100 bits (110), Expect = 3e-16
Identities = 128/174 (74%), Gaps = 2/174 (1%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|||||||| || ||||| ||||| ||| || ||||| ||| || ||||| || ||
Sbjct 202663 GTAGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGGCCATCCTCGAGCTGCTTGCCG 202604
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| | |||| |||||||| || ||||| ||||||||||||||| ||| || ||||
Sbjct 202603 GCGAAAATCAGGCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGGATCTTTGTCTTG 202544
Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGT 127089
| |||| |||| ||||| | ||| || |||| || | || ||||||||
Sbjct 202543 ACGTTG-TCGATCGTGTCGGATGACTCAACCTCGAGTGTGATGGTCTTGCCGGT 202491
Score = 87.8 bits (96), Expect = 2e-12
Identities = 123/173 (71%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| || || |||||||| ||||| ||| || |||||| || || ||||| || ||
Sbjct 202380 GTGGATTCCTTTTGAATGTTGTAGTCGGACAGGGTGCGACCGTCTTCAAGCTGCTTGCCG 202321
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| ||||||| |||||||| || || || || |||||||||||| || || ||||
Sbjct 202320 GCAAAGATCAAGCGCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGAATCTTGGTCTTG 202261
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGT 127089
| | |||| ||||| | |||||| |||| || | || ||||||||
Sbjct 202260 ACATTGTCGATAGTGTCGGAGGACTCGACCTCGAGCGTGATGGTCTTGCCGGT 202208
>seq143
Length=90640
Score = 86.0 bits (94), Expect = 6e-12
Identities = 96/127 (76%), Gaps = 1/127 (1%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || || || ||||| ||| | |||||| ||| || ||||| ||||||
Sbjct 43100 GTCGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGACCATCCTCGAGCTGCTTTCCA 43041
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| |||| | |||||||| || || || ||||||||||||||| ||| || ||||
Sbjct 43040 GCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTG 42981
Query 127037 A-GTTGT 127042
| |||||
Sbjct 42980 ACGTTGT 42974
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475498577033760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |