Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01- 12] 374 sequences; 33,379,470 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq188 179 6e-40 >seq188 Length=237477 Score = 179 bits (198), Expect = 6e-40 Identities = 464/692 (67%), Gaps = 19/692 (3%) Strand=Plus/Minus Query 203838 TCTTG-TCCACCGTGAACTGAATGGCGTTCAC-GGCAGGCCTGCTTCTCAGATAGTACAT 203895 ||||| || || ||||||||||||| | || ||||| | || | | ||||||||||| Sbjct 168910 TCTTGGTCGACAGTGAACTGAATGG-GAGCAGAGGCAGCCATGGTACGGAGATAGTACAT 168852 Query 203896 GCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTT 203955 ||| ||||| || || || ||| ||| | ||||||||| | | |||| || | | Sbjct 168851 GCCTGTCTTGAGACCAAGCTTCCATCCGGCAAAGTGCATGGAGGTGATCTTGCCCATGGT 168792 Query 203956 GGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTG 204014 ||| || |||||| ||||| || |||||| ||||| ||| ||||| || || || | Sbjct 168791 GGGCTCCTTCATGTGGATGTTGAGTGACTGGGACTGGTCAATG-AAGGCACCACGGTCGG 168733 Query 204015 CGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCTG 204073 | ||||| | ||||||||| |||||| || ||||| || || ||| | | |||| || Sbjct 168732 CAGCCATCTGGATAATGGTTCGCTGCGAGATTTCCCAAACAGTTTTGTAGAGGGTCT-TG 168674 Query 204074 GTGTGTTGAGGCACATCTTCCCACGTCCTG---ATCGAGCCGTTGTCGGCCATCAGTCTC 204130 || | | ||| | || | | ||||| || ||||| ||||| || | | Sbjct 168673 GTCTCCTCAGGGATAT-TGGGGA--TCCTGGCAATGGAGCCACCCTCGGCGATGATACGG 168617 Query 204131 ATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTG 204190 || || | | ||| ||||| ||||| || || ||| | || |||||| Sbjct 168616 TTCTTCATGTTCTCAGACCACAGGCCCATATCGACAAGGTCCTTGAGCAACCATGGGTTG 168557 Query 204191 ATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCG 204250 | || ||| || || || | ||||| | || | | | | |||| |||| | || ||| Sbjct 168556 ACGACCTGGAACTCACCCGCGAGCACACGGCGTGAGTAGATGTTGGAGGTGTAGGGCTCG 168497 Query 204251 AACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGC 204310 || ||| ||||| |||| |||||||| ||| ||| || ||||| || || | ||| Sbjct 168496 AAGCACTCATTGTTTCCGAGAATCTGAGAGGTCGAGGCAGTTGGCATAGGTGCAATCAGC 168437 Query 204311 AGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTC---GTGC 204367 || |||||||| ||||||| | || | || |||||| | |||||| | | Sbjct 168436 AGCGAGTTGCGGACACCGTGCTGAGCGATCTTGGCCTTCAGTTCAGCCCAGTCCCAGAG- 168378 Query 204368 ATCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTG 204427 |||| |||| | ||| ||||||||| |||||| ||| || || ||| ||| Sbjct 168377 ATCG--GTGGGGGTAACGTTCCACATGTCATACTGAAGGATACCCTGTGAGACGGGGGAT 168320 Query 204428 CCCTTGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCG 204487 |||| ||| ||| ||||| | ||| | || | | ||| |||| || || || Sbjct 168319 CCCTCGTAGGTCTCGTAAGGACCAAGCTCCTTGGCAATGTCGCAGGAGGAGGTCAGAGCA 168260 Query 204488 TGATAGTACATGGTCTCAAAGATCTGAACGTT 204519 || ||| |||||||| |||||||| | ||| Sbjct 168259 GCATGGTAGATGGTCTCGAAGATCTGGATGTT 168228 Score = 116 bits (128), Expect = 6e-21 Identities = 290/430 (67%), Gaps = 8/430 (2%) Strand=Plus/Minus Query 205072 GTACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGCCCTGGACATTTTTTGGGACA 205131 |||||||||| |||| || ||||| || || ||| || || || | ||||| || Sbjct 167756 GTACAGCGCCTCAAACTCCTCGCCGTAGACATCAGCCAGGCCAGGGCACTCGTTGGGGCA 167697 Query 205132 CATCAGAGACCACAT-CTGATCGTCTTTCACCCTCTCCATAAACAGGTCGCTGATCCACA 205190 ||| |||| |||| | | || |||| || | || ||| ||||| ||| ||||||| Sbjct 167696 CATGAGAGTCCACTCGCCGTTC-TCTTGGACACGCTTCATGAACAGATCGGGAATCCACA 167638 Query 205191 GGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTCTTTTTCAAGTCCA 205250 | |||| || ||||||||||| | || | || | || ||||||| | ||| | Sbjct 167637 GAGCGTAGAAGAGATCACGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGA 167578 Query 205251 GCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTAACCACACGGCCATTGCGCCTGGCCTC 205309 | ||||| | ||||| |||||||| ||||| | | | ||| | || ||||| | | Sbjct 167577 G-GAAGCCAAAGATGTCAGCGTGCCATGGCTCGAGGTAGATGGCAAAGGCACCTGGACGC 167519 Query 205310 TTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTCGCAGCATCGGCACC 205369 ||||| ||||||||||| || |||| | ||| | || || ||||| || | Sbjct 167518 TTGTTGCCACCCTGGTCGACGTAACGAGCAGTGTTATTGTATACACGGAGCATAGGGATA 167459 Query 205370 AGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAGCCTTCAGCCCTCACGTTGGAG 205429 |||||||| | || ||||| |||| | ||| ||||| || | | | || | Sbjct 167458 AGACCGTTTGATGTTCCGTTGGTGCCGCCAATGTATGAGCCGGTGGCACGGA-TTCGGTG 167400 Query 205430 ATGGCCGCG-CCAATCCCGCCAGAACACTTGGCGATCTGGGCGCAC-TCTTGCAGAGTGC 205487 | | | ||||| ||||||| ||||| |||| ||| ||| ||||| |||||| Sbjct 167399 CACGTTGAGACCAATACCGCCAGCGGTCTTGGAGATCAAGGCACACGTCTTG-AGAGTGT 167341 Query 205488 TGTAGATGCC 205497 ||||||||| Sbjct 167340 CGTAGATGCC 167331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795151482649440