Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01-
12] 374 sequences; 33,379,470 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq290 141 2e-28
seq273 114 3e-20
seq143 114 3e-20
>seq290
Length=256071
Score = 141 bits (156), Expect = 2e-28
Identities = 162/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | || || | |||||| || |||||||| |||| ||||||||| | | |||
Sbjct 203143 CGAAGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTC 203084
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
|| ||||| || || ||||| || || |||||||||||||||||||||||| || ||
Sbjct 203083 CTGCCATCCTCGAGTTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGAGGGATACCC 203024
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| ||||| ||||||| || | ||| || | | ||| || |||||
Sbjct 203023 TCCTTGTCCTGGATCTTGGTCTTCACGTTGTCAATGGTATCGCTCGATTCCACCTCCAAT 202964
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| || || || || ||||| || |||||
Sbjct 202963 GTGATTGTCTTGCCGGTAAGGGTCTTCACGAAGATTTG 202926
Score = 122 bits (134), Expect = 2e-22
Identities = 141/190 (74%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| || || ||||| |||||||| || | ||||||||| | || ||| | |||||
Sbjct 202678 AGGACGAGATGCAGAGTAGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGGCCATCC 202619
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| |||||||| || || ||||||||||| ||| ||| || || |||
Sbjct 202618 TCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCC 202559
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| |||||| ||| ||| |||| ||||| | || || || || | ||||| |||
Sbjct 202558 TGGATCTTTGTCTTGACGTTGTCGATCGTGTCGGATGACTCAACCTCGAGTGTGATGGTC 202499
Query 199598 TTACCCGTGA 199607
|| || ||||
Sbjct 202498 TTGCCGGTGA 202489
Score = 109 bits (120), Expect = 1e-18
Identities = 138/190 (73%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| |||||||| || || |||||||| | ||||||||| | || || | || |||
Sbjct 202395 AGGACCAGGTGGAGGGTGGATTCCTTTTGAATGTTGTAGTCGGACAGGGTGCGACCGTCT 202336
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| ||||| ||||| | ||||||||||| || ||| || || |||
Sbjct 202335 TCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCTGGGGGAATACCCTCCTTGTCC 202276
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|||||||| ||| || |||| ||||| | | || || || | |||||| |||
Sbjct 202275 TGAATCTTGGTCTTGACATTGTCGATAGTGTCGGAGGACTCGACCTCGAGCGTGATGGTC 202216
Query 199598 TTACCCGTGA 199607
|| || ||||
Sbjct 202215 TTGCCGGTGA 202206
Score = 93.3 bits (102), Expect = 1e-13
Identities = 81/101 (80%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || | ||| ||||| |||||||| |||| ||||||||| | | ||| | || |||
Sbjct 202906 AGCACCAAGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTACGGCCGTCT 202847
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518
|||| |||||| || ||||| ||||||||||||||||| ||
Sbjct 202846 TCCAACTGCTTACCAGCGAAAATGAGACGCTGCTGGTCTGG 202806
>seq273
Length=368666
Score = 114 bits (126), Expect = 3e-20
Identities = 86/101 (85%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| | |||||| ||||||||||| |||| ||||||||| | | ||| | |||||
Sbjct 357122 AGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCC 357181
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518
|| |||||||| |||||||||||||||||||||||||||||
Sbjct 357182 TCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGG 357222
>seq143
Length=90640
Score = 114 bits (126), Expect = 3e-20
Identities = 102/128 (80%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| ||||| || ||||||||||| |||| ||||||||| | | || | |||||
Sbjct 43115 AGGACGAGGTGAAGTGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGACCATCC 43056
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| ||||||||||| |||||||||||||||||||||||||| ||| || || |||
Sbjct 43055 TCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 42996
Query 199538 TGAATCTT 199545
|| |||||
Sbjct 42995 TGGATCTT 42988
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178915950755058
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |