Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01-
12] 374 sequences; 33,379,470 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq290 143 3e-29
seq273 98.7 1e-15
seq143 96.9 4e-15
>seq290
Length=256071
Score = 143 bits (158), Expect = 3e-29
Identities = 145/186 (78%), Gaps = 2/186 (1%)
Strand=Plus/Minus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|| ||||||| ||| |||||| || || ||||||||||| |||||||| | || |||
Sbjct 202675 ACGAGATGCAGAGTAGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGGCCATCCTCG 202616
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
||||||||||||||||| |||| |||||||||||| | || | || |||||||||| |
Sbjct 202615 AGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGG 202556
Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563
||||| |||||| ||| | | | ||||||| || || || || | |||||||| ||
Sbjct 202555 ATCTTTGTCTTGA-CGTTGTCGATCGTGTCGGATGACTCAACCTCGAGTGTGATGGTCTT 202497
Query 46564 GCCCGT 46569
||| ||
Sbjct 202496 GCCGGT 202491
Score = 122 bits (134), Expect = 1e-22
Identities = 127/167 (76%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
|||||||| || ||||||||||| || ||||| |||| || |||||||||||||| ||
Sbjct 202374 TCCTTTTGAATGTTGTAGTCGGACAGGGTGCGACCGTCTTCAAGCTGCTTGCCGGCAAAG 202315
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
||||||||||||||||| | || | | |||||||||| ||||| |||||| |
Sbjct 202314 ATCAAGCGCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGAATCTTGGTCTTGACATTG 202255
Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569
| | |||||| || || || || | ||||||||| ||||| ||
Sbjct 202254 TCGATAGTGTCGGAGGACTCGACCTCGAGCGTGATGGTCTTGCCGGT 202208
Score = 120 bits (132), Expect = 3e-22
Identities = 144/193 (75%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| |||||||| || || || | | || ||||| ||||| || || ||
Sbjct 203114 CTCCTTCTGGATGTTGTAGTCCGAGAGCGTCCTGCCATCCTCGAGTTGCTTACCAGCAAA 203055
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | ||||||||||| | || | | |||||||||| |||||| |||| | |||
Sbjct 203054 GATGAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGTCTTCA-CGT 202996
Query 46522 CGCCACCG-TGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580
| || | | |||||||||||||| |||| ||||| || ||||| || || || || |
Sbjct 202995 TGTCAATGGTATCGCTCGATTCCACCTCCAATGTGATTGTCTTGCCGGTAAGGGTCTTCA 202936
Query 46581 CAAAGATTTGCAT 46593
| |||||||||||
Sbjct 202935 CGAAGATTTGCAT 202923
Score = 98.7 bits (108), Expect = 1e-15
Identities = 139/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| |||||||| || ||||| || |||| || | |||||| || |||||
Sbjct 202886 CTCCTTCTGGATGTTGTAGTCCGAGAGAGTACGGCCGTCTTCCAACTGCTTACCAGCGAA 202827
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | ||||||||||| | || | || ||||||||| |||||| ||||| |||
Sbjct 202826 AATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTGA-CGT 202768
Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580
| | | || || || || || || | |||||||| || || |||| || || |
Sbjct 202767 TGTCAATAGTATCCGAAGACTCGACCTCAAGAGTGATGGTCTTTCCAGTCAATGTCTTGA 202708
Query 46581 CAAAGATTTGCAT 46593
| ||||| |||||
Sbjct 202707 CGAAGATCTGCAT 202695
>seq273
Length=368666
Score = 98.7 bits (108), Expect = 1e-15
Identities = 81/99 (82%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||||||||| |||||||| | || || |||||||||||||||||
Sbjct 357142 CTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAA 357201
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500
|| | ||||||||||| | || | || |||||||||
Sbjct 357202 GATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 357240
>seq143
Length=90640
Score = 96.9 bits (106), Expect = 4e-15
Identities = 91/116 (78%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||||||||| || ||||| | || ||||||||||| || |||||
Sbjct 43095 CTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGACCATCCTCGAGCTGCTTTCCAGCGAA 43036
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGA 46517
|| | ||||||||||| | || | || |||||||||| |||||| |||||
Sbjct 43035 GATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGA 42980
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565235757510480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |