Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01-
12] 374 sequences; 33,379,470 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq154 248 9e-61
seq290 111 2e-19
seq273 104 2e-17
seq143 95.1 1e-14
>seq154
Length=40832
Score = 248 bits (274), Expect = 9e-61
Identities = 581/875 (66%), Gaps = 69/875 (8%)
Strand=Plus/Minus
Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684
||||| || || || || || || | | || ||| | ||| || || |||||||||
Sbjct 13763 TTCTCGAAGAAGTTGGTCTTGCCAGCAAGCGAGATGTTCTCCATGAAGTCAAAGGGGTTG 13704
Query 132685 GCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCG 132744
| | || ||| ||||||| | || ||| ||||| | || || || |||||
Sbjct 13703 GTGGCGTGGTAAACCTTGGTGTTGCCCAATGCGAGCAGCAGACGATCAGCGACAAACTCA 13644
Query 132745 ATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACGCACCGG-CAGCGCTTCGG 132802
||||| || ||||| | || || | | | || |||||| |||| || ||| || |||
Sbjct 13643 ATGTACTGGCACATGAGCTTGGCGTTCATG-CCGAGCAGA-GCACAGGGCAGAGCGTCGC 13586
Query 132803 TGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGC 132862
|||| || |||||| || || || ||||||| ||| | ||| | || ||
Sbjct 13585 TGAGGAACTCTTGCTCAATCTGAACAGCCTCGGTGATGATGGCTTGGACGGCCTCCTTGC 13526
Query 132863 TCGGCCG----TTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCC 132918
| || || ||| | | | ||| | || ||| || ||||| |||| ||||
Sbjct 13525 TGGGGCGGGTGTTG----AGAAGAGAGAAGAGCAGGCAGGCGAAGTCAGTGTGCATGCCC 13470
Query 132919 TCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTG 132978
|| || | || ||||| |||||| ||| || | ||| ||||| ||||| || || ||
Sbjct 13469 TCATCACGAGAGATGAGCTCGTTGGAGAAGGTAAGGCCAGGCATTAGGCCACGCTTCTTC 13410
Query 132979 AGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCC 133038
| ||| || |||| ||||| || |||||||| ||||| || || ||||| ||
Sbjct 13409 AACCAGAAGATGGATGCGAACGAACCGCTAAAGAAGATACCCTCAACAGCAGCGAACGCG 13350
Query 133039 ACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCC 133098
|| || || | |||| |||| | ||| | |||||| ||||| ||||| ||||||
Sbjct 13349 ACAAGACGGCTGGCGAAAGTGGAGTTCTTGTCCGAGATCCATCGCAGGGCCCAGTCGGCC 13290
Query 133099 TTTT---------------CTTTGACGC-----ACGGC---AT-------CGTT------ 133122
|| | || |||||| ||| || ||||
Sbjct 13289 TTCTTGCGGATGCAGGGAACTATGACGCGTTAGACGCGTAAATTGAAGCGCGTTGTGGGG 13230
Query 133123 -------------TCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGC--ACG 133167
||||| ||||| |||| | | | | || || ||| ||| | |
Sbjct 13229 TAACTTACTGTTGTCGATAGCGTTGAACAG--GTACTGGCGCTGCCTAGGCTCGCTAATG 13172
Query 133168 TAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAG 133227
|||||||||||||| || || | || ||||| ||||||||||| ||| || |||
Sbjct 13171 TAGGTGTCGATGAGCAGAGAGTAAGTCTCAGAGTGGACGTTCTCCATCATGATCTGGAAG 13112
Query 133228 CCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTT 133287
||||| ||||| ||||||||| | ||| ||||| | ||||||||||||||| ||
Sbjct 13111 CCGTAGAAGCAACGCGCCTCGGGTATCTGTACTTCGCTGGAGAAACGCTCGACCAGGTTC 13052
Query 133288 TCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGC 133347
|||||||||||||| ||| |||||| || ||||| || ||||| ||||||| ||||
Sbjct 13051 TCGTTGACGATGCCATCGGAGGCGGCAAAGAAGGCGAGGACGTGGGAGATGAAAAAGCGC 12992
Query 133348 TCGTTGTCGTTCAAGCGC---TCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCG 133404
|||| |||||||| |||| | ||||||| | |||||||| || || | |||||||
Sbjct 12991 TCGTCGTCGTTCAGGCGCTTGTTCCAGTCGTGAAGATCCTTGGAGAGATCAATCTCCTCG 12932
Query 133405 ACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439
||||||| || || |||||||| || ||||||||
Sbjct 12931 GCGGTCCAGAAAGA-GCCTCGGCCTTCTTGTACAT 12898
>seq290
Length=256071
Score = 111 bits (122), Expect = 2e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || | || || || |||||||| | || |||||| | |
Sbjct 202695 ATGCAGATCTTCGTCAAGACATTGACTGGAAAGACCATCACTCTTGAGGTCGAGTCTTCG 202754
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | | |||| | || | || |||| ||||| ||||| || ||| | |||||
Sbjct 202755 GATACTATTGACAACG-TCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCA 202813
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| ||||||| ||| || || ||| |||| |||| || || ||| ||||||||
Sbjct 202814 GCAGCGTCTCATTTTCGCTGGTAAGCAGTTGGAAGACGGCCGTACTCTCTCGGACTACAA 202873
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||| ||||| | || || || |||||||| ||| || | || ||
Sbjct 202874 CATCCAGAAGGAGTCAACTCTTCACTTGGTGCTCCGTCTGCGTGGTGG 202921
Score = 109 bits (120), Expect = 5e-19
Identities = 142/194 (73%), Gaps = 2/194 (1%)
Strand=Plus/Plus
Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAG 38325
|||| ||||| |||||||| |||| || ||| | |||||| || | | | | |||
Sbjct 202489 TCACCGGCAAGACCATCACACTCGAGGTTGAGTCATCCGACA-CGATCGACAACGTCAAG 202547
Query 38326 AAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGC 38384
| ||| |||| ||||| ||||| ||||| | ||||| ||||| || |||| ||| |||
Sbjct 202548 ACAAAGATCCAGGACAAGGAGGGCATTCCTCCAGACCAGCAGCGCCTGATTTTCGCCGGC 202607
Query 38385 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTG 38444
|| ||||| || || | ||||| || |||||||||||| || ||||| | || |||
Sbjct 202608 AAGCAGCTCGAGGATGGCCGCACTCTGTCCGACTACAACATTCAGAAGGAGTCTACTCTG 202667
Query 38445 CATTTGGTGCTGCG 38458
||| | || || ||
Sbjct 202668 CATCTCGTCCTCCG 202681
Score = 107 bits (118), Expect = 2e-18
Identities = 143/195 (73%), Gaps = 4/195 (2%)
Strand=Plus/Plus
Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAA 38324
|||| ||||| |||||||| |||| |||||| || |||||| | | || | | ||
Sbjct 202206 TCACCGGCAAGACCATCACGCTCGAGGTCGAGTCCTCCGACACTATCGACAATG--TCAA 202263
Query 38325 GAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGG 38383
|| || || | ||||| ||||| |||||| | ||||| ||||| | || | || ||
Sbjct 202264 GACCAAGATTCAGGACAAGGAGGGTATTCCCCCAGACCAGCAGCGCTTGATCTTTGCCGG 202323
Query 38384 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCT 38443
||| ||||| || |||| |||||||| |||||||||||| ||||||||| | || ||
Sbjct 202324 CAAGCAGCTTGAAGACGGTCGCACCCTGTCCGACTACAACATTCAAAAGGAATCCACCCT 202383
Query 38444 GCATTTGGTGCTGCG 38458
|| |||| || ||
Sbjct 202384 CCACCTGGTCCTCCG 202398
Score = 93.3 bits (102), Expect = 4e-14
Identities = 160/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || || ||||| || ||||| | || || || | | |
Sbjct 202923 ATGCAAATCTTCGTGAAGACCCTTACCGGCAAGACAATCACATTGGAGGTGGAATCGAGC 202982
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|| | | | | |||| | |||| || |||| ||||| ||||| || || | ||||
Sbjct 202983 GATACCATTGACAACG--TGAAGACCAAGATCCAGGACAAGGAGGGTATCCCTCCGGACC 203040
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| ||||| ||||| | || || || || || || || | | || ||| |||||||
Sbjct 203041 AGCAGCGTCTCATCTTTGCTGGTAAGCAACTCGAGGATGGCAGGACGCTCTCGGACTACA 203100
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||||| ||||| | || || || |||||||| ||| | | |||||
Sbjct 203101 ACATCCAGAAGGAGTCCACCCTCCACTTGGTGCTCCGTCTTCGTGGCGG 203149
>seq273
Length=368666
Score = 104 bits (114), Expect = 2e-17
Identities = 96/122 (79%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396
||||| ||||| |||||| | ||||| ||||| ||||| | ||| ||||| ||||| ||
Sbjct 357240 GACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTTGAG 357181
Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456
|| | ||||| ||| ||||||||||||||| ||||| |||| || || ||||| ||
Sbjct 357180 GATGGCCGCACTCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTCCACTTGGTCCTC 357121
Query 38457 CG 38458
||
Sbjct 357120 CG 357119
>seq143
Length=90640
Score = 95.1 bits (104), Expect = 1e-14
Identities = 100/132 (76%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387
|| |||| ||||| ||||| |||||| | ||||| ||||| ||||| | ||| || ||
Sbjct 42988 AAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTCATCTTCGCTGGAAAG 43047
Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCAT 38447
||||| || || | |||||||| ||||||||||||||| ||||| |||| || ||
Sbjct 43048 CAGCTCGAGGATGGTCGCACCCTTTCCGACTACAACATCCAGAAGGAGTCGACACTTCAC 43107
Query 38448 TTGGTGCTGCGT 38459
| || || |||
Sbjct 43108 CTCGTCCTCCGT 43119
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500170461692160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |