Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01- 12] 374 sequences; 33,379,470 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq154 248 9e-61 seq290 111 2e-19 seq273 104 2e-17 seq143 95.1 1e-14 >seq154 Length=40832 Score = 248 bits (274), Expect = 9e-61 Identities = 581/875 (66%), Gaps = 69/875 (8%) Strand=Plus/Minus Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684 ||||| || || || || || || | | || ||| | ||| || || ||||||||| Sbjct 13763 TTCTCGAAGAAGTTGGTCTTGCCAGCAAGCGAGATGTTCTCCATGAAGTCAAAGGGGTTG 13704 Query 132685 GCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCG 132744 | | || ||| ||||||| | || ||| ||||| | || || || ||||| Sbjct 13703 GTGGCGTGGTAAACCTTGGTGTTGCCCAATGCGAGCAGCAGACGATCAGCGACAAACTCA 13644 Query 132745 ATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACGCACCGG-CAGCGCTTCGG 132802 ||||| || ||||| | || || | | | || |||||| |||| || ||| || ||| Sbjct 13643 ATGTACTGGCACATGAGCTTGGCGTTCATG-CCGAGCAGA-GCACAGGGCAGAGCGTCGC 13586 Query 132803 TGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGC 132862 |||| || |||||| || || || ||||||| ||| | ||| | || || Sbjct 13585 TGAGGAACTCTTGCTCAATCTGAACAGCCTCGGTGATGATGGCTTGGACGGCCTCCTTGC 13526 Query 132863 TCGGCCG----TTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCC 132918 | || || ||| | | | ||| | || ||| || ||||| |||| |||| Sbjct 13525 TGGGGCGGGTGTTG----AGAAGAGAGAAGAGCAGGCAGGCGAAGTCAGTGTGCATGCCC 13470 Query 132919 TCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTG 132978 || || | || ||||| |||||| ||| || | ||| ||||| ||||| || || || Sbjct 13469 TCATCACGAGAGATGAGCTCGTTGGAGAAGGTAAGGCCAGGCATTAGGCCACGCTTCTTC 13410 Query 132979 AGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCC 133038 | ||| || |||| ||||| || |||||||| ||||| || || ||||| || Sbjct 13409 AACCAGAAGATGGATGCGAACGAACCGCTAAAGAAGATACCCTCAACAGCAGCGAACGCG 13350 Query 133039 ACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCC 133098 || || || | |||| |||| | ||| | |||||| ||||| ||||| |||||| Sbjct 13349 ACAAGACGGCTGGCGAAAGTGGAGTTCTTGTCCGAGATCCATCGCAGGGCCCAGTCGGCC 13290 Query 133099 TTTT---------------CTTTGACGC-----ACGGC---AT-------CGTT------ 133122 || | || |||||| ||| || |||| Sbjct 13289 TTCTTGCGGATGCAGGGAACTATGACGCGTTAGACGCGTAAATTGAAGCGCGTTGTGGGG 13230 Query 133123 -------------TCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGC--ACG 133167 ||||| ||||| |||| | | | | || || ||| ||| | | Sbjct 13229 TAACTTACTGTTGTCGATAGCGTTGAACAG--GTACTGGCGCTGCCTAGGCTCGCTAATG 13172 Query 133168 TAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAG 133227 |||||||||||||| || || | || ||||| ||||||||||| ||| || ||| Sbjct 13171 TAGGTGTCGATGAGCAGAGAGTAAGTCTCAGAGTGGACGTTCTCCATCATGATCTGGAAG 13112 Query 133228 CCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTT 133287 ||||| ||||| ||||||||| | ||| ||||| | ||||||||||||||| || Sbjct 13111 CCGTAGAAGCAACGCGCCTCGGGTATCTGTACTTCGCTGGAGAAACGCTCGACCAGGTTC 13052 Query 133288 TCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGC 133347 |||||||||||||| ||| |||||| || ||||| || ||||| ||||||| |||| Sbjct 13051 TCGTTGACGATGCCATCGGAGGCGGCAAAGAAGGCGAGGACGTGGGAGATGAAAAAGCGC 12992 Query 133348 TCGTTGTCGTTCAAGCGC---TCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCG 133404 |||| |||||||| |||| | ||||||| | |||||||| || || | ||||||| Sbjct 12991 TCGTCGTCGTTCAGGCGCTTGTTCCAGTCGTGAAGATCCTTGGAGAGATCAATCTCCTCG 12932 Query 133405 ACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 ||||||| || || |||||||| || |||||||| Sbjct 12931 GCGGTCCAGAAAGA-GCCTCGGCCTTCTTGTACAT 12898 >seq290 Length=256071 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | || || || |||||||| | || |||||| | | Sbjct 202695 ATGCAGATCTTCGTCAAGACATTGACTGGAAAGACCATCACTCTTGAGGTCGAGTCTTCG 202754 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | |||| | || | || |||| ||||| ||||| || ||| | ||||| Sbjct 202755 GATACTATTGACAACG-TCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCA 202813 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||||| ||| || || ||| |||| |||| || || ||| |||||||| Sbjct 202814 GCAGCGTCTCATTTTCGCTGGTAAGCAGTTGGAAGACGGCCGTACTCTCTCGGACTACAA 202873 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| | || || || |||||||| ||| || | || || Sbjct 202874 CATCCAGAAGGAGTCAACTCTTCACTTGGTGCTCCGTCTGCGTGGTGG 202921 Score = 109 bits (120), Expect = 5e-19 Identities = 142/194 (73%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAG 38325 |||| ||||| |||||||| |||| || ||| | |||||| || | | | | ||| Sbjct 202489 TCACCGGCAAGACCATCACACTCGAGGTTGAGTCATCCGACA-CGATCGACAACGTCAAG 202547 Query 38326 AAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGC 38384 | ||| |||| ||||| ||||| ||||| | ||||| ||||| || |||| ||| ||| Sbjct 202548 ACAAAGATCCAGGACAAGGAGGGCATTCCTCCAGACCAGCAGCGCCTGATTTTCGCCGGC 202607 Query 38385 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTG 38444 || ||||| || || | ||||| || |||||||||||| || ||||| | || ||| Sbjct 202608 AAGCAGCTCGAGGATGGCCGCACTCTGTCCGACTACAACATTCAGAAGGAGTCTACTCTG 202667 Query 38445 CATTTGGTGCTGCG 38458 ||| | || || || Sbjct 202668 CATCTCGTCCTCCG 202681 Score = 107 bits (118), Expect = 2e-18 Identities = 143/195 (73%), Gaps = 4/195 (2%) Strand=Plus/Plus Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAA 38324 |||| ||||| |||||||| |||| |||||| || |||||| | | || | | || Sbjct 202206 TCACCGGCAAGACCATCACGCTCGAGGTCGAGTCCTCCGACACTATCGACAATG--TCAA 202263 Query 38325 GAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGG 38383 || || || | ||||| ||||| |||||| | ||||| ||||| | || | || || Sbjct 202264 GACCAAGATTCAGGACAAGGAGGGTATTCCCCCAGACCAGCAGCGCTTGATCTTTGCCGG 202323 Query 38384 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCT 38443 ||| ||||| || |||| |||||||| |||||||||||| ||||||||| | || || Sbjct 202324 CAAGCAGCTTGAAGACGGTCGCACCCTGTCCGACTACAACATTCAAAAGGAATCCACCCT 202383 Query 38444 GCATTTGGTGCTGCG 38458 || |||| || || Sbjct 202384 CCACCTGGTCCTCCG 202398 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || ||||| || ||||| | || || || | | | Sbjct 202923 ATGCAAATCTTCGTGAAGACCCTTACCGGCAAGACAATCACATTGGAGGTGGAATCGAGC 202982 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 || | | | | |||| | |||| || |||| ||||| ||||| || || | |||| Sbjct 202983 GATACCATTGACAACG--TGAAGACCAAGATCCAGGACAAGGAGGGTATCCCTCCGGACC 203040 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| ||||| | || || || || || || || | | || ||| ||||||| Sbjct 203041 AGCAGCGTCTCATCTTTGCTGGTAAGCAACTCGAGGATGGCAGGACGCTCTCGGACTACA 203100 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||| ||||| | || || || |||||||| ||| | | ||||| Sbjct 203101 ACATCCAGAAGGAGTCCACCCTCCACTTGGTGCTCCGTCTTCGTGGCGG 203149 >seq273 Length=368666 Score = 104 bits (114), Expect = 2e-17 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| ||||| |||||| | ||||| ||||| ||||| | ||| ||||| ||||| || Sbjct 357240 GACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTTGAG 357181 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 || | ||||| ||| ||||||||||||||| ||||| |||| || || ||||| || Sbjct 357180 GATGGCCGCACTCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTCCACTTGGTCCTC 357121 Query 38457 CG 38458 || Sbjct 357120 CG 357119 >seq143 Length=90640 Score = 95.1 bits (104), Expect = 1e-14 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387 || |||| ||||| ||||| |||||| | ||||| ||||| ||||| | ||| || || Sbjct 42988 AAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTCATCTTCGCTGGAAAG 43047 Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCAT 38447 ||||| || || | |||||||| ||||||||||||||| ||||| |||| || || Sbjct 43048 CAGCTCGAGGATGGTCGCACCCTTTCCGACTACAACATCCAGAAGGAGTCGACACTTCAC 43107 Query 38448 TTGGTGCTGCGT 38459 | || || ||| Sbjct 43108 CTCGTCCTCCGT 43119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500170461692160