Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01-
12] 374 sequences; 33,379,470 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq238 282 5e-71
seq171 111 2e-19
seq188 95.1 2e-14
>seq238
Length=228433
Score = 282 bits (312), Expect = 5e-71
Identities = 481/695 (69%), Gaps = 12/695 (2%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||| ||||||||||||||||| || || || ||||| | ||||| || ||||||||
Sbjct 58125 TCGAAGTCTTCACCACCCAAGTGAGTGTCACCTGCGGTGGACTTGACCTCGAAGATACCC 58066
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
|||||||| | | | || ||||| || |||||||| || || || || ||||| |||
Sbjct 58065 TCTTCAATGGTAAGGAGGGAGACATCGAAGGTACCACCTCCAAGATCGAAGATGAGGACG 58006
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
|| || | | | ||||| ||||||||||| || || || || || || || ||
Sbjct 58005 TTGCGCTCACCCTGGGTCTTCTTGTCGAGACCGTAGGCAATGGCGGCAGCGGTGGGCTCG 57946
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696
|| || ||||| || ||| ||||| || || | ||||| || || || || |||
Sbjct 57945 TTGATGATACGGAGGACGTTGAGGCCGGCGATGAGACCAGCATCCTTGGTGGCCTGACGT 57886
Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756
|| || ||||| |||||||| ||||| || ||||| |||| |||| | ||||||
Sbjct 57885 TGTGAGTCGTTGAAGTAGGCTGGGACAGTGACGACGGCGTTGTTGACGGTGCCACCGAGG 57826
Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816
|| || || || | || |||| ||||| || ||||| ||||| ||||| || | |
Sbjct 57825 TAGGACTCGGCAGTCTCCCTCATCTTGGTCAGGACCATGGATGAGATCTCCTCTGGTGTG 57766
Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACC---G 7873
|| ||| || || || || || || | || | || || || |||| |
Sbjct 57765 AAGGTCTTCTCCTCGCCCTTGAACTCGACCTGGATGACTGGCTT----GC--CACCCTTG 57712
Query 7874 GGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTT 7933
|| ||||| | | | | ||||| ||| | ||||||| || | |||||
Sbjct 57711 TCAATGACCTTGAAGGGGAAGTGCTTCATGTCGGCCTGGACCTCAGCATCGGCGAACTTG 57652
Query 7934 CTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTC 7993
| || || || ||||| ||||| || || ||||| |||||||||||| ||||||
Sbjct 57651 CGACCAATGAGGCGCTTGGCATCGAAGACGGTGTTGGAGGGGTTCATGGCGACCTGGTTC 57592
Query 7994 TTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTC 8053
|| || | ||| ||||| ||||| || || || || || |||||| |||| || ||
Sbjct 57591 TTTGCAGAGTCACCGATGAGACGCTCGGTA---TCGGTGAAGGCGACGAACGAGGGTGTT 57535
Query 8054 GTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACG 8113
|| || || || |||||||| ||||| || || | |||||| | | | ||| ||| ||
Sbjct 57534 GTGCGGTTACCCTGGTCGTTGGCAATGATCTCGATGCGGTCATCTCGGAAGATGCCAACA 57475
Query 8114 CACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148
||||| || || ||||| | |||||| ||||| ||
Sbjct 57474 CACGAGTATGTGGTTCCAAGATCAATTCCGATCGC 57440
Score = 172 bits (190), Expect = 7e-38
Identities = 278/400 (70%), Gaps = 0/400 (0%)
Strand=Plus/Minus
Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069
||||| | | ||| || || ||||| | || ||||| ||||| ||||| |||||||||
Sbjct 58637 TCACCAGACAGGATAGCAGCCTGGACGGCAGCACCGTAGGCGACAGCCTCGTCGGGGTTA 58578
Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129
|| | || || | || || ||||| || | || || | ||| | || | || |||
Sbjct 58577 ATGGACTTGTTGGGCTCCTTGCCGTTGAAGAAGTCGGAGACCATCTTCTGGACCTTGGGG 58518
Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189
|| || || ||||||||||| | || || || | || || || |||||||| |
Sbjct 58517 ATACGGGTGGATCCACCGACGAGGACAATCTCGTGGACGGAAGACTTGTCGATCTTGGCA 58458
Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249
|| ||||| ||||| || ||||| ||||| | |||| ||||| |||
Sbjct 58457 TCGCGAAGGACACGCTCGACGGGCTCCATGGTGGAGCGGAAGAGGTCCTGGCACAGCTCC 58398
Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309
|| || || |||||||| ||||| || ||||| || | || ||| | | || |||||
Sbjct 58397 TCGAAGCGGGCACGGGTGATGGAGGTGTAGAAGTCGATTCCCTCGAAGAGAGAGTCAATC 58338
Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369
||||||| || ||||| | |||||| | || ||||| || ||||| || || |||||
Sbjct 58337 TCAATGGAAGTCTGTGCAGACGAAGACAGAGTGCGCTTGGCACGCTCGCAAGCAGTTCGG 58278
Query 7370 AAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCT 7409
| ||| ||||||||||| | |||| || | ||| ||||
Sbjct 58277 AGACGGCGAAGGGCACGTGCGTTAGAGGTGAGATCCTTCT 58238
>seq171
Length=1159086
Score = 111 bits (122), Expect = 2e-19
Identities = 206/302 (68%), Gaps = 9/302 (3%)
Strand=Plus/Plus
Query 7484 TCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCA 7543
|| || || || || ||||| |||| ||| || | |||| | | ||| |||||
Sbjct 72616 TCTCCGGCAGTAGCCTTGACAGTGAAGACACCACCCTGGATGTGAAGAAGCGACACATCG 72675
Query 7544 AACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTT---- 7599
|| ||||||||||| || || | ||||| |||||| | || | ||| | |||
Sbjct 72676 AAAGTACCACCACCGAGATCGTAGATGAGGACGTTCCTCTCCTTGTC---GGACTTACCG 72732
Query 7600 --ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTC 7657
| |||||||||| |||||||| || || || || || || || ||||| || |||
Sbjct 72733 GCACCGAGACCGTAAGCGATAGCGGCGGCGGTGGGCTCGTTGATGATACGGAGGACGTTG 72792
Query 7658 AGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCC 7717
|||||||| || | | || || || || || || || || ||||| ||||||||
Sbjct 72793 AGGCCAGCGATGGCACCGGCGTCCTTGGTGGCCTGACGCTGGTTGTCGTTGAAGTAGGCA 72852
Query 7718 GGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTC 7777
||||| || | ||| || | | ||| ||||| ||||| | | || |||| || |||
Sbjct 72853 GGGACAGTGATGACGGCCTTCTCGACCTTCTTGCCGAGCTTGGTCTCAGCGACCTCCTTC 72912
Query 7778 AT 7779
||
Sbjct 72913 AT 72914
>seq188
Length=237477
Score = 95.1 bits (104), Expect = 2e-14
Identities = 283/435 (65%), Gaps = 5/435 (1%)
Strand=Plus/Minus
Query 105562 ACGCGTTTCATGAACAAATCTGGAATCCACATGGCTGAAAAGAGGTCTCGACACCTCGCC 105621
|| || |||||||||| ||| |||||||||| || | ||||| || || | ||
Sbjct 167668 ACACGCTTCATGAACAGATCGGGAATCCACAGAGCGTAGAAGAGATCACGGGCGCGAACC 167609
Query 105622 TCTTCATCACCTTGATTCAAACGAATTTCGAGAAAATCGAGAATATCGGCGTGCCATGGT 105681
|| || | || || ||| || | ||||| || | | || || |||||||||||
Sbjct 167608 TCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAAGCCAAAGATGTCAGCGTGCCATGGC 167549
Query 105682 TCTAAATAGACTGCAATAGACCCTTTACGAC----GCCCCGCTTGATTGACATATCTTGC 105737
|| | |||| |||| | ||| ||| ||| | || | | ||| || | ||
Sbjct 167548 TCGAGGTAGATGGCAAAGGCACCTGGACGCTTGTTGCCACCCTGG-TCGACGTAACGAGC 167490
Query 105738 GGTTGAGTTATACACTCGTAACATTGGAATAATACCATCGGATGTTCCATTTGTTCCACG 105797
|| || || || || | ||| || |||| ||| | |||||||| || || || |
Sbjct 167489 AGTGTTATTGTATACACGGAGCATAGGGATAAGACCGTTTGATGTTCCGTTGGTGCCGCC 167430
Query 105798 AATATGTGATTTATTTGCACGTACATCGTGAACGTGTAACCCAATACCCCCAGCCCACTT 105857
||| | ||| | ||||| | ||| |||| | |||||||| ||||| |||
Sbjct 167429 AATGTATGAGCCGGTGGCACGGATTCGGTGCACGTTGAGACCAATACCGCCAGCGGTCTT 167370
Query 105858 ACTGATACGCGCACACTCTTTTACTGTATCGTAAATACCGTCGATACTATCTTCCTTATT 105917
||| |||||| || | || ||||| || ||||| || ||||| || || |
Sbjct 167369 GGAGATCAAGGCACACGTCTTGAGAGTGTCGTAGATGCCGTCAATGCTATCCTCTTTCAT 167310
Query 105918 CGCAATCAGGAAACACGATGACATTTGTGGTCTGGGTGTACCAGCATTGAACAGAGTTGG 105977
| || ||||| || || ||||| || || || ||||| ||||||||||| || ||
Sbjct 167309 GTCGATAAGGAAGCAGGAGGACATCTGAGGGGATGGAGTACCGGCATTGAACAGCGTCGG 167250
Query 105978 TGTTGCATGAATGAA 105992
|| || || ||||
Sbjct 167249 TGAGGCGTGTGTGAA 167235
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635129830754160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |