Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01- 12] 374 sequences; 33,379,470 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq238 282 5e-71 seq171 111 2e-19 seq188 95.1 2e-14 >seq238 Length=228433 Score = 282 bits (312), Expect = 5e-71 Identities = 481/695 (69%), Gaps = 12/695 (2%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| ||||||||||||||||| || || || ||||| | ||||| || |||||||| Sbjct 58125 TCGAAGTCTTCACCACCCAAGTGAGTGTCACCTGCGGTGGACTTGACCTCGAAGATACCC 58066 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 |||||||| | | | || ||||| || |||||||| || || || || ||||| ||| Sbjct 58065 TCTTCAATGGTAAGGAGGGAGACATCGAAGGTACCACCTCCAAGATCGAAGATGAGGACG 58006 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || || | | | ||||| ||||||||||| || || || || || || || || Sbjct 58005 TTGCGCTCACCCTGGGTCTTCTTGTCGAGACCGTAGGCAATGGCGGCAGCGGTGGGCTCG 57946 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || ||||| || ||| ||||| || || | ||||| || || || || ||| Sbjct 57945 TTGATGATACGGAGGACGTTGAGGCCGGCGATGAGACCAGCATCCTTGGTGGCCTGACGT 57886 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || || ||||| |||||||| ||||| || ||||| |||| |||| | |||||| Sbjct 57885 TGTGAGTCGTTGAAGTAGGCTGGGACAGTGACGACGGCGTTGTTGACGGTGCCACCGAGG 57826 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || || || || | || |||| ||||| || ||||| ||||| ||||| || | | Sbjct 57825 TAGGACTCGGCAGTCTCCCTCATCTTGGTCAGGACCATGGATGAGATCTCCTCTGGTGTG 57766 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACC---G 7873 || ||| || || || || || || | || | || || || |||| | Sbjct 57765 AAGGTCTTCTCCTCGCCCTTGAACTCGACCTGGATGACTGGCTT----GC--CACCCTTG 57712 Query 7874 GGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTT 7933 || ||||| | | | | ||||| ||| | ||||||| || | ||||| Sbjct 57711 TCAATGACCTTGAAGGGGAAGTGCTTCATGTCGGCCTGGACCTCAGCATCGGCGAACTTG 57652 Query 7934 CTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTC 7993 | || || || ||||| ||||| || || ||||| |||||||||||| |||||| Sbjct 57651 CGACCAATGAGGCGCTTGGCATCGAAGACGGTGTTGGAGGGGTTCATGGCGACCTGGTTC 57592 Query 7994 TTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTC 8053 || || | ||| ||||| ||||| || || || || || |||||| |||| || || Sbjct 57591 TTTGCAGAGTCACCGATGAGACGCTCGGTA---TCGGTGAAGGCGACGAACGAGGGTGTT 57535 Query 8054 GTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACG 8113 || || || || |||||||| ||||| || || | |||||| | | | ||| ||| || Sbjct 57534 GTGCGGTTACCCTGGTCGTTGGCAATGATCTCGATGCGGTCATCTCGGAAGATGCCAACA 57475 Query 8114 CACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 ||||| || || ||||| | |||||| ||||| || Sbjct 57474 CACGAGTATGTGGTTCCAAGATCAATTCCGATCGC 57440 Score = 172 bits (190), Expect = 7e-38 Identities = 278/400 (70%), Gaps = 0/400 (0%) Strand=Plus/Minus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||| | | ||| || || ||||| | || ||||| ||||| ||||| ||||||||| Sbjct 58637 TCACCAGACAGGATAGCAGCCTGGACGGCAGCACCGTAGGCGACAGCCTCGTCGGGGTTA 58578 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 || | || || | || || ||||| || | || || | ||| | || | || ||| Sbjct 58577 ATGGACTTGTTGGGCTCCTTGCCGTTGAAGAAGTCGGAGACCATCTTCTGGACCTTGGGG 58518 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189 || || || ||||||||||| | || || || | || || || |||||||| | Sbjct 58517 ATACGGGTGGATCCACCGACGAGGACAATCTCGTGGACGGAAGACTTGTCGATCTTGGCA 58458 Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249 || ||||| ||||| || ||||| ||||| | |||| ||||| ||| Sbjct 58457 TCGCGAAGGACACGCTCGACGGGCTCCATGGTGGAGCGGAAGAGGTCCTGGCACAGCTCC 58398 Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309 || || || |||||||| ||||| || ||||| || | || ||| | | || ||||| Sbjct 58397 TCGAAGCGGGCACGGGTGATGGAGGTGTAGAAGTCGATTCCCTCGAAGAGAGAGTCAATC 58338 Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369 ||||||| || ||||| | |||||| | || ||||| || ||||| || || ||||| Sbjct 58337 TCAATGGAAGTCTGTGCAGACGAAGACAGAGTGCGCTTGGCACGCTCGCAAGCAGTTCGG 58278 Query 7370 AAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCT 7409 | ||| ||||||||||| | |||| || | ||| |||| Sbjct 58277 AGACGGCGAAGGGCACGTGCGTTAGAGGTGAGATCCTTCT 58238 >seq171 Length=1159086 Score = 111 bits (122), Expect = 2e-19 Identities = 206/302 (68%), Gaps = 9/302 (3%) Strand=Plus/Plus Query 7484 TCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCA 7543 || || || || || ||||| |||| ||| || | |||| | | ||| ||||| Sbjct 72616 TCTCCGGCAGTAGCCTTGACAGTGAAGACACCACCCTGGATGTGAAGAAGCGACACATCG 72675 Query 7544 AACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTT---- 7599 || ||||||||||| || || | ||||| |||||| | || | ||| | ||| Sbjct 72676 AAAGTACCACCACCGAGATCGTAGATGAGGACGTTCCTCTCCTTGTC---GGACTTACCG 72732 Query 7600 --ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTC 7657 | |||||||||| |||||||| || || || || || || || ||||| || ||| Sbjct 72733 GCACCGAGACCGTAAGCGATAGCGGCGGCGGTGGGCTCGTTGATGATACGGAGGACGTTG 72792 Query 7658 AGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCC 7717 |||||||| || | | || || || || || || || || ||||| |||||||| Sbjct 72793 AGGCCAGCGATGGCACCGGCGTCCTTGGTGGCCTGACGCTGGTTGTCGTTGAAGTAGGCA 72852 Query 7718 GGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTC 7777 ||||| || | ||| || | | ||| ||||| ||||| | | || |||| || ||| Sbjct 72853 GGGACAGTGATGACGGCCTTCTCGACCTTCTTGCCGAGCTTGGTCTCAGCGACCTCCTTC 72912 Query 7778 AT 7779 || Sbjct 72913 AT 72914 >seq188 Length=237477 Score = 95.1 bits (104), Expect = 2e-14 Identities = 283/435 (65%), Gaps = 5/435 (1%) Strand=Plus/Minus Query 105562 ACGCGTTTCATGAACAAATCTGGAATCCACATGGCTGAAAAGAGGTCTCGACACCTCGCC 105621 || || |||||||||| ||| |||||||||| || | ||||| || || | || Sbjct 167668 ACACGCTTCATGAACAGATCGGGAATCCACAGAGCGTAGAAGAGATCACGGGCGCGAACC 167609 Query 105622 TCTTCATCACCTTGATTCAAACGAATTTCGAGAAAATCGAGAATATCGGCGTGCCATGGT 105681 || || | || || ||| || | ||||| || | | || || ||||||||||| Sbjct 167608 TCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAAGCCAAAGATGTCAGCGTGCCATGGC 167549 Query 105682 TCTAAATAGACTGCAATAGACCCTTTACGAC----GCCCCGCTTGATTGACATATCTTGC 105737 || | |||| |||| | ||| ||| ||| | || | | ||| || | || Sbjct 167548 TCGAGGTAGATGGCAAAGGCACCTGGACGCTTGTTGCCACCCTGG-TCGACGTAACGAGC 167490 Query 105738 GGTTGAGTTATACACTCGTAACATTGGAATAATACCATCGGATGTTCCATTTGTTCCACG 105797 || || || || || | ||| || |||| ||| | |||||||| || || || | Sbjct 167489 AGTGTTATTGTATACACGGAGCATAGGGATAAGACCGTTTGATGTTCCGTTGGTGCCGCC 167430 Query 105798 AATATGTGATTTATTTGCACGTACATCGTGAACGTGTAACCCAATACCCCCAGCCCACTT 105857 ||| | ||| | ||||| | ||| |||| | |||||||| ||||| ||| Sbjct 167429 AATGTATGAGCCGGTGGCACGGATTCGGTGCACGTTGAGACCAATACCGCCAGCGGTCTT 167370 Query 105858 ACTGATACGCGCACACTCTTTTACTGTATCGTAAATACCGTCGATACTATCTTCCTTATT 105917 ||| |||||| || | || ||||| || ||||| || ||||| || || | Sbjct 167369 GGAGATCAAGGCACACGTCTTGAGAGTGTCGTAGATGCCGTCAATGCTATCCTCTTTCAT 167310 Query 105918 CGCAATCAGGAAACACGATGACATTTGTGGTCTGGGTGTACCAGCATTGAACAGAGTTGG 105977 | || ||||| || || ||||| || || || ||||| ||||||||||| || || Sbjct 167309 GTCGATAAGGAAGCAGGAGGACATCTGAGGGGATGGAGTACCGGCATTGAACAGCGTCGG 167250 Query 105978 TGTTGCATGAATGAA 105992 || || || |||| Sbjct 167249 TGAGGCGTGTGTGAA 167235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635129830754160