Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01- 12] 374 sequences; 33,379,470 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq290 96.9 3e-15 >seq290 Length=256071 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | |||||| || || || ||| || || || ||||| || || ||| | || Sbjct 202912 AGACGGAGCACCAAGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTACGG 202853 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| |||||||||||||| || || || || ||||| || || | ||| | ||||||| Sbjct 202852 CCGTCTTCCAACTGCTTACCAGCGAAAATGAGACGCTGCTGGTCTGGGGGGATGCCCTCC 202793 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || || | | || || || | ||| ||||| | || Sbjct 202792 TTGTCTTGGATCTTGGCCTTGACGTTGTCAATAGTATCCGAAGACTCGACCTCAAGAGTG 202733 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| ||||| || || || || |||||||| Sbjct 202732 ATGGTCTTTCCAGTCAATGTCTTGACGAAGATCTGCAT 202695 Score = 82.4 bits (90), Expect = 6e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||| || || ||| || |||||||| ||||| || || || | ||| |||| || Sbjct 202392 ACCAGGTGGAGGGTGGATTCCTTTTGAATGTTGTAGTCGGACAGGGTGCGACCGTCTTCA 202333 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||| |||||||| |||| ||||| || || | ||||| ||||||||||| | Sbjct 202332 AGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGA 202273 Query 48678 ATCTT 48682 ||||| Sbjct 202272 ATCTT 202268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380935863638802