Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01- 12] 374 sequences; 33,379,470 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq188 376 5e-99 seq154 185 2e-41 >seq188 Length=237477 Score = 376 bits (416), Expect = 5e-99 Identities = 1113/1695 (66%), Gaps = 62/1695 (4%) Strand=Plus/Minus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || || ||||| | ||| ||| |||||| |||| || |||||||||||||| ||||| Sbjct 168901 ACAGTGAACTGAATGGGAGCAGAGGCAGCCATGGTACGGAGATAGTACATGCCTGTCTTG 168842 Query 212613 AGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCTGTGAGTTTCTTCAGCTTAATATTC 212669 || || ||| ||| ||| | |||||| | |||| |||| | || Sbjct 168841 AGACCAAGCTT---CCATCCGGCAAAGTGCATGGAGGTGA---TCTTGCCC-----ATGG 168793 Query 212670 TGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCC 212729 ||| | | || || || | ||| || ||||| |||||| ||||| | | Sbjct 168792 TGGGCTCCTTCATG-------TGGATGTTGAGTGACTGGGACTGGTCAATGAAGGCACCA 168740 Query 212730 CTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATT 212789 | ||| || ||||| | || || || ||| |||| ||||| || || ||| ||| Sbjct 168739 CGGTCGGCAGCCATCTGGATAATGGTTCGCTGCGAGATTTCCCAAACAGTTTTGTAGAGG 168680 Query 212790 TCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCAC---AGACCCCCTGTGT-ATGGT 212845 ||| ||||| |||| |||||| | ||| || | |||| | ||| | Sbjct 168679 GTCTTGGTCTCCTCAGGGATATTGGGGATCCTG-GCAATGGAGCCACCCTCGGCGATGAT 168621 Query 212846 CAGCTGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTG 212905 | | | ||||| ||| ||| |||||| | | ||| ||||| || Sbjct 168620 ACGGTTCTT---CATGTTCTCAGACCACAGGCCCATATCGACAAGGTCCTTGAGCAACCA 168564 Query 212906 AGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTA 212965 |||||||| | |||||| ||||| | |||||| | | ||| | ||| || ||||| Sbjct 168563 TGGGTTGACGACCTGGAACTCACCCGCGAGCACACGGCGTGAGTAGATGTTGGAGGTGTA 168504 Query 212966 GGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGC 213025 |||||||| || ||| ||||| || |||||||| | || ||| || ||||| || || Sbjct 168503 GGGCTCGAAGCACTCATTGTTTCCGAGAATCTGAGAGGTCGAGGCAGTTGGCATAGGTGC 168444 Query 213026 CACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTC 213085 | ||| || ||| | || ||||||| |||| | | || || |||||||| Sbjct 168443 AATCAGCAGCGAGTTGCGGACACCGTGCTGAGCGATCTTGGCCTTCAGTTCAGCCCAGTC 168384 Query 213086 CCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTT 213145 ||| ||| ||| || ||||||||||||||| |||| | ||| || | Sbjct 168383 CCAG-----AGATCGGTGGGGGTA----ACGTTCCACATGTCATACTGAAGGATACCCTG 168333 Query 213146 GCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGA 213205 |||||| |||| ||| | ||| || ||| |||||||||| | |||||||| Sbjct 168332 TGAGACGGGGGATCCCTCGTAGGTCTCGTAAGGACCAAGCTCCTTGGCAATGTCGCAGGA 168273 Query 213206 CGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTC 213265 | ||| ||||| | ||||||||| || || |||| ||||||||||||||||||| Sbjct 168272 GGAGGTCAGAGCAGCATGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTC 168213 Query 213266 TGGGGACGTGAAGGGCATCATCA-TGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGA 213324 | ||| ||| |||| || |||| |||| |||||||||| || || || || | Sbjct 168212 GGCCGACTCGAATGGCAGGCGCAGTGCG-AGGAAAGCATCAGCCAGACCTTGCACACCCA 168154 Query 213325 TGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGC-ACTCCTCCAAGGGGTAAAAGTTG 213383 | || ||||||| ||| | | ||| | || || |||||| | |||||| |||| Sbjct 168153 TACCAATGGGTCGGTGGCGGAAGTT-GCTGCGGCGCGCCTCCTCGACGGGGTAGTGGTTG 168095 Query 213384 CAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCG 213443 || ||||||||||| | |||||| ||| | || | |||||| | | || | || | Sbjct 168094 ACATCAATGATCTTGTTCAAGTTGCGAGTGACAACCTGGGTGACCTCGTGGAGCTTCTTG 168035 Query 213444 TGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTG 213503 | ||| | || | || | ||||| ||||||||| | | ||||| |||| Sbjct 168034 AAGTCAAACTCTCCGCGCTTGTAGTCGACAAAGGAAGGCAGGGCAAGGGAGGCCAAGTTG 167975 Query 213504 CAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCAT 213563 || || || ||||| | || | | |||||||| || || || |||||||||||| || Sbjct 167974 CAGACAGCGACCTCGTCAGGGGCAGTGTACTCGATAATTTCCGTGCACAGGTTGGAGCTG 167915 Query 213564 CGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATG 213623 || ||||| |||||||||| ||||| ||| |||| || |||||||||||||||| Sbjct 167914 CGAATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTAGAGCATG 167855 Query 213624 TAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGC--TCCAGAGGTACCTGGCCT 213681 |||| || ||||| ||||| | | || | |||| ||| || | | ||| Sbjct 167854 AAGGGATTACCAGTCTCGGTCTGGGCCTCGAGAA--TGGCATACCACAGCTTCTGGGCGC 167797 Query 213682 TGACCACCCGCCTGACAGCTCCGGGCGTAGC--CTCGTACTGTTCGTAGAGCTCGTTGAA 213739 || | | || || || || | || |||||| ||||| ||| | | || Sbjct 167796 GGA----CAGTCTCACGGC-CCTTGTTCTGCTTCTCGTAGCTCTCGTACAGCGCCTCAAA 167742 Query 213740 TTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTC 213799 || | ||| |||| |||| || || || ||| |||||||| |||| || Sbjct 167741 CTCCTCGCCGTAGACATCAGCCAGGCCAGGGCACTCGTTGGGGCACATGAGAGTCCACTC 167682 Query 213800 CCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTC 213859 |||| ||| ||| | || ||||||||| || || | |||||| ||| ||| || || Sbjct 167681 GCCGTTCTCTTGGACACGCTTCATGAACAGATCGGGAATCCACAGAGCGTAGAAGAGATC 167622 Query 213860 CCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTC 213919 | || | ||| ||| || ||| ||||| || || || ||| |||||||||| Sbjct 167621 ACGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAAGCCAAAGATGTC 167562 Query 213920 CGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTC 213976 |||||||| ||||| | ||||||||||||||| || | || | ||||| |||||||| Sbjct 167561 AGCGTGCCATGGCTCGAGGTAGATGGCAAAGGCACCTGGACGCTTGTTGCCACCCTGGTC 167502 Query 213977 CACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCC 214036 || | || | ||| | | || || | || | || ||||| || ||| Sbjct 167501 GACGTAACGAGCAGTGTTATTGTATACACGGAGCATAGGGATAAGACCGTTTGATGTTCC 167442 Query 214037 GTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCA--GGTTGCTCATGGAGAGCCCTATG 214094 |||||| || | || || ||||||| ||| | | | ||| | | |||| || || Sbjct 167441 GTTGGTGCCGCCAATGTATGAGCCGGTGGCACGGATTCGGTGCACGTTGAGA--CCAATA 167384 Query 214095 CCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATG 214154 || || ||| ||||||||||| ||| || | | | ||| || ||||||| | ||| Sbjct 167383 CCGCCAGCGGTCTTGGAGATCAAGGCACACGTCTTGAGAGTGTCGTAGATGCCGTCAATG 167324 Query 214155 CTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTG-GGGCCTGGACGAGCCAGA 214213 || || ||| | | || | | ||||||| || | ||| ||| |||| | || | Sbjct 167323 CTATCCTCTTTCATGTCGATAAGGAAGCAGGAGGACATCTGAGGGGATGGA-GTACCGGC 167265 Query 214214 GTTGAAAAGCGTGGG 214228 ||||| ||||| || Sbjct 167264 ATTGAACAGCGTCGG 167250 >seq154 Length=40832 Score = 185 bits (204), Expect = 2e-41 Identities = 356/518 (69%), Gaps = 13/518 (3%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | ||||| |||||||| ||||| || | | |||||||||||| Sbjct 13782 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCAAGCGAGATGTTCTC 13723 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAG 47958 ||||||| |||||||||| | || || ||| || ||||| |||||| Sbjct 13722 CATGAAGTCAAAGGGGTTGGTGGCGTGGTAAACCTTGGTGTTGCCCAATGCGAGCAGCAG 13663 Query 47959 GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGA 48018 |||| ||||| |||| ||||| | ||||||| || ||||||||| | || | Sbjct 13662 ACGATCAGCGACAAACTCAATGTACTGGCACATGAGCTTGGCGTTCATGCCGAGCAGAG- 13604 Query 48019 CAC-GGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077 ||| ||||| ||| | |||| ||||| | ||| ||||| || || || | || Sbjct 13603 CACAGGGCAGAGCGTCGCTGAGGAACTCTTGCTCAATCTGAACAGCCTCGGTGATGATG- 13545 Query 48078 GCTTA-ACGCGGGACT--CTGAGG-GTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAG 48133 |||| ||| || ||| || | ||||| | || | |||||| |||| Sbjct 13544 GCTTGGACGGCCTCCTTGCTGGGGCGGGTGTTGAGAAGA------GAGAAGAGCAGGCAG 13491 Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193 || ||||| |||||| ||| || || || ||||||| ||||||||||| || ||| Sbjct 13490 GCGAAGTCAGTGTGCATGCCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTAAGGCCA 13431 Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253 ||||| | || | || || | |||||| || | ||||| || || |||||||| Sbjct 13430 GGCATTAGGCCACGCTTCTTCAACCAGAAGATGGATGCGAACGAACCGCTAAAGAAGATA 13371 Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATC 48313 ||||| || || ||||||||| || | |||||| | ||||||||| |||||| Sbjct 13370 CCCTCAACAGCAGCGAACGCGACAAGACGGCTGGCGAAAGTGGAGTTCTTGTCCGAGATC 13311 Query 48314 CAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 || || |||||||| |||||||| |||||| || Sbjct 13310 CATCGCAGGGCCCAGTCGGCCTTCTTGCGGATGCAGGG 13273 Score = 107 bits (118), Expect = 4e-18 Identities = 121/162 (75%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488 |||||||||| || ||||| || ||||||||| ||||||||| | ||||| | Sbjct 13146 TCTCAGAGTGGACGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGCGCCTCGGGTA 13087 Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548 ||| ||||| ||||||| | ||| | ||| ||||| ||||| || ||||| || || | Sbjct 13086 TCTGTACTTCGCTGGAGAAACGCTCGACCAGGTTCTCGTTGACGATGCCATCGGAGGCGG 13027 Query 48549 CAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGT 48590 |||||||||| ||||| || | |||| |||||||| || Sbjct 13026 CAAAGAAGGCGAGGACGTGGGAGATGAAAAAGCGCTCGTCGT 12985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931528445084160