Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01- 12] 374 sequences; 33,379,470 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq188 134 4e-26 seq109 125 2e-23 seq214 98.7 3e-15 seq132 84.2 6e-11 >seq188 Length=237477 Score = 134 bits (148), Expect = 4e-26 Identities = 560/880 (64%), Gaps = 19/880 (2%) Strand=Plus/Minus Query 155629 TGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGT 155688 |||| || | ||| || ||||||||| || || ||||| || | |||||||||| Sbjct 167949 TGTACTCGATAATTTCCGTGCACAGGTTGGAGCTGCGAATGGTACCCAGGTTCTTCTGGT 167890 Query 155689 TAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTG 155748 | || | ||| |||||||||||||| || ||| | || | || ||||| |||| | Sbjct 167889 TGCTCTTGCGGTTGCAAGCATCCTTGTAGAGCATGAAGGGATTACCAGTCTCGGTCTGGG 167830 Query 155749 CGTCCAGAATCTTTAGCCAGAGGT------CACGGGCATTAATTTGCTTGTTGTATCTGC 155802 | || ||||| ||| || | | ||| || | | |||| ||||| Sbjct 167829 CCTCGAGAATGGCATACCACAGCTTCTGGGCGCGGACAGTCTCACGGCCCTTGT-TCTGC 167771 Query 155803 CTTCCGACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTC 155862 | ||| || || ||||||| | ||||| ||||| |||| ||| | Sbjct 167770 TT-----CTCGTAGCTCTCGTACAGCGCCTCAAACTCCTCGCCGTAGACATCAGCCAGGC 167716 Query 155863 CAGGGCACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAA 155922 ||||||||| | |||||| | || | ||| || | ||||||| ||| | Sbjct 167715 CAGGGCACTCGTTGGGGCACATGAGAGTCCACTCGCCGTTCTCTTGGACACGCTTCATGA 167656 Query 155923 ATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGT 155982 | | ||| ||| | ||| ||||| || || | || |||||| | ||||| Sbjct 167655 ACAGATCGGGAATCCACAGAGCGTAGAAGAGATCACGGGCGCGAACCTCCTCCTTGCCGT 167596 Query 155983 GATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAG 156042 | ||||| || || || | ||| | || |||| || |||||| || || || | Sbjct 167595 GGTTCTTGCGGAGGTCGAGGAAGCCAAAGATGTCAGCGTGCCATGGCTCGAGGTAGATGG 167536 Query 156043 CAAAACTACC---ATTCCTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGA 156099 |||| ||| | | | ||||||||||| || || || |||||||| |||||| | | Sbjct 167535 CAAAGGCACCTGGACGCTTGTTGCCACCCTGGTCGACGTAACGAGCAGTGTTATTGTATA 167476 Query 156100 CACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAG 156159 ||| |||||||| |||| ||| || || || || ||||| |||| ||| | || || | Sbjct 167475 CACGGAGCATAGGGATAAGACCGTTTGATGTTCCGTTGGTGCCGCCAATGTATGAGCCGG 167416 Query 156160 ATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGC 156219 | || | || | | || |||||||| || | || || || || | Sbjct 167415 TGGCACGGATTCGGTGCACGTTGAGACCAATACCGCCAGCGGTCTTGGAGATCAAGGCAC 167356 Query 156220 ATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCA--TTGATAGTAGATA 156277 | ||| | ||| | | | || || ||||| ||| |||| || | |||| || | Sbjct 167355 ACGTCTTGAGAGTGTCGTAGATGCCGTCAATGCTATCCTCTTTCATGTCGATA--AGGAA 167298 Query 156278 GCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAAT 156337 ||| || | ||||| ||| || || || ||||| || || |||| || || | Sbjct 167297 GCAGGAGGACATCTGAGGGGATGGAGTACCGGCATTGAACAGCGTCGGTGAGGCGTGTGT 167238 Query 156338 AAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTG 156397 || || || | ||||| || || || ||||| | |||||||| | ||||| Sbjct 167237 GAAGTATTTTTGTGACATGTAGTCATAGGTCTCAATGGCCTTCTCAATGTCCTCGCCGTG 167178 Query 156398 AATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAAT 156457 |||| || || || | ||| ||| ||||| || ||||| ||| | ||||| || Sbjct 167177 GATACCGACAGCAACACGCATGAGCATGTGCTGTGGGCGCTCGGCAACCTTGCCATCTAT 167118 Query 156458 TCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAA 156497 || || ||||||| ||| || || || || || || ||| Sbjct 167117 GCGGAGGAGGTATGAGCGCTCAAGTGTCTTGAAGCCAAAA 167078 >seq109 Length=223701 Score = 125 bits (138), Expect = 2e-23 Identities = 393/594 (66%), Gaps = 26/594 (4%) Strand=Plus/Minus Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGC-GTCATATAGCCG 251465 || |||||||| | | |||||||| || |||| ||||| || | || | | || || Sbjct 193432 ATCAGACCACAGATGTCGCACACATGTACCGTGTACGCATCCGAGACTGTGA-AGAGACG 193374 Query 251466 ACCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAA 251525 |||| ||| || |||||||| | |||||||||||||| ||||| || ||||| Sbjct 193373 CTCCTTCAGGAAAGCAGCAGCACCGTGGGCGATCATACAATCACGTTCCATCTCTCCGAA 193314 Query 251526 ACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGG 251585 ||||||||||||||| | ||| | ||||||| ||||||| ||||| ||| | | || Sbjct 193313 ACGAAGACCACCATCCCTAGCACGACCCTCGACAGGCTGGCGAGTAAGAATCTGTAGCGG 193254 Query 251586 ACC----GATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGA 251641 ||| | ||||| || ||| || | |||||||| | |||||||||||| Sbjct 193253 ACCACGAGCGCGAGCGTGGATTTTG----TCGTCGACCATATGTCTCAGACGCTGGTAGT 193198 Query 251642 ATGCGGGACCGATGAAGATGCTCGAAGGCATTTGCTCTCCAGTTAGAGCGTTATACATAA 251701 | | ||||| | |||||| || ||| || || ||||| | |||| ||||| | Sbjct 193197 ACGTCGGACCCAAGAAGATTTGCGTCCGCAATTTCTTACCAGTGTGGCCGTTGTACATGA 193138 Query 251702 CTTCGTTTCCATTAGATTC--ATAACCAAGTTTCTGTAGC-TCTGAAGCAATATCACCAA 251758 ||| ||| | ||| || ||| | | ||| ||| || || | | | | Sbjct 193137 TCTCGAAACCA--CGCTTCTGGTATCCAGCATCTTCCAGCAACTG-AGAGATCTGATCGA 193081 Query 251759 TCTTGAATTTGCTAAAACTGGTGCCGTCTCCGTAAAGACC--CATTTGAATCAACACTTT 251816 | ||| | | | || ||| |||| || | | || | | | | |||| ||| Sbjct 193080 CCGTGACATCGGTGAACGGTGTGGCGTCACCCTCCTGTCCGGTAATGGCACCAAC-CTTG 193022 Query 251817 GCCTAAAAGTGTCTCTTTCAGTTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATT 251876 | | | || || || ||||| || ||||||||| ||||| || || || || Sbjct 193021 GAC-AGCAGACATTCAACCAAATGGGCAATTGTCATACGAGACGGAATGGCGTGAGGGTT 192963 Query 251877 GATGATGATGTCGGGTTTCAGTCCATCAGCAGTGAAGGGCATATCCTTTTCC--TCAATA 251934 |||||||| || ||| ||| || || ||||| |||||||| |||| || || Sbjct 192962 GATGATGAGATCTGGTGTCACACCTTCCCTGGTGAAAGGCATATC---TTCCTGTCGGTA 192906 Query 251935 -ATGTTTCCAATAGTTCCCTTTTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987 | | ||||| || || ||||| |||||||||||| ||||| |||||||| Sbjct 192905 GGTAATACCAATCGTACCTTTTTGACCGTGACGAGAAGCAAACTTGTCACCAAT 192852 >seq214 Length=233559 Score = 98.7 bits (108), Expect = 3e-15 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 354016 GCGAGAGCACCAAGCGAGTCACGGTCGAGGAAATTAGTAGGTTCGTCAAGGATAAGAACG 354075 || ||| ||||||| ||||||||||| | ||| || ||||| |||||||||| |||| Sbjct 87174 GCAAGACCACCAAGAGAGTCACGGTCCAAGAAGTTGGTAGGCTCGTCAAGGACGAGAAGA 87115 Query 354076 TGCGGCTCCATCCACATTGCTGCAGCCAGAACTACCTTAACCTTCTGTCCGCCTGATAG 354134 ||||| | ||||||| || |||| || || ||||| ||||||||||| || || || Sbjct 87114 TGCGGGTTGTTCCACATGGCACCAGCAAGCACGACCTTGACCTTCTGTCCTCCAGAGAG 87056 >seq132 Length=48160 Score = 84.2 bits (92), Expect = 6e-11 Identities = 110/152 (72%), Gaps = 3/152 (2%) Strand=Plus/Minus Query 301816 ATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAAG 301875 ||||| | | ||| || |||||| |||| ||||| |||||| | ||||||||||| Sbjct 37643 ATTTCCTTGAGACGTGGCACACCAAGGGTGACGTT---CTTGGAAGACACACCAGCAAAA 37587 Query 301876 TGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATCATA 301935 ||||| || || || || | || |||| ||||||||||| || || |||| || | Sbjct 37586 TGGAAGGTGTTGAGCGTCATCTGCGTAGCGGGCTCACCAATGGACTGGGCTGCAAGCACA 37527 Query 301936 CCAACCATTTCTCCTGGTGCTACAATAGACTT 301967 || ||||| || || || || ||| || ||| Sbjct 37526 CCGACCATCTCACCAGGAGCGACAGCAGCCTT 37495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471810547234038