Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01-
12] 374 sequences; 33,379,470 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq188 134 4e-26
seq109 125 2e-23
seq214 98.7 3e-15
seq132 84.2 6e-11
>seq188
Length=237477
Score = 134 bits (148), Expect = 4e-26
Identities = 560/880 (64%), Gaps = 19/880 (2%)
Strand=Plus/Minus
Query 155629 TGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGT 155688
|||| || | ||| || ||||||||| || || ||||| || | ||||||||||
Sbjct 167949 TGTACTCGATAATTTCCGTGCACAGGTTGGAGCTGCGAATGGTACCCAGGTTCTTCTGGT 167890
Query 155689 TAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTG 155748
| || | ||| |||||||||||||| || ||| | || | || ||||| |||| |
Sbjct 167889 TGCTCTTGCGGTTGCAAGCATCCTTGTAGAGCATGAAGGGATTACCAGTCTCGGTCTGGG 167830
Query 155749 CGTCCAGAATCTTTAGCCAGAGGT------CACGGGCATTAATTTGCTTGTTGTATCTGC 155802
| || ||||| ||| || | | ||| || | | |||| |||||
Sbjct 167829 CCTCGAGAATGGCATACCACAGCTTCTGGGCGCGGACAGTCTCACGGCCCTTGT-TCTGC 167771
Query 155803 CTTCCGACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTC 155862
| ||| || || ||||||| | ||||| ||||| |||| ||| |
Sbjct 167770 TT-----CTCGTAGCTCTCGTACAGCGCCTCAAACTCCTCGCCGTAGACATCAGCCAGGC 167716
Query 155863 CAGGGCACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAA 155922
||||||||| | |||||| | || | ||| || | ||||||| ||| |
Sbjct 167715 CAGGGCACTCGTTGGGGCACATGAGAGTCCACTCGCCGTTCTCTTGGACACGCTTCATGA 167656
Query 155923 ATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGT 155982
| | ||| ||| | ||| ||||| || || | || |||||| | |||||
Sbjct 167655 ACAGATCGGGAATCCACAGAGCGTAGAAGAGATCACGGGCGCGAACCTCCTCCTTGCCGT 167596
Query 155983 GATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAG 156042
| ||||| || || || | ||| | || |||| || |||||| || || || |
Sbjct 167595 GGTTCTTGCGGAGGTCGAGGAAGCCAAAGATGTCAGCGTGCCATGGCTCGAGGTAGATGG 167536
Query 156043 CAAAACTACC---ATTCCTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGA 156099
|||| ||| | | | ||||||||||| || || || |||||||| |||||| | |
Sbjct 167535 CAAAGGCACCTGGACGCTTGTTGCCACCCTGGTCGACGTAACGAGCAGTGTTATTGTATA 167476
Query 156100 CACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAG 156159
||| |||||||| |||| ||| || || || || ||||| |||| ||| | || || |
Sbjct 167475 CACGGAGCATAGGGATAAGACCGTTTGATGTTCCGTTGGTGCCGCCAATGTATGAGCCGG 167416
Query 156160 ATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGC 156219
| || | || | | || |||||||| || | || || || || |
Sbjct 167415 TGGCACGGATTCGGTGCACGTTGAGACCAATACCGCCAGCGGTCTTGGAGATCAAGGCAC 167356
Query 156220 ATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCA--TTGATAGTAGATA 156277
| ||| | ||| | | | || || ||||| ||| |||| || | |||| || |
Sbjct 167355 ACGTCTTGAGAGTGTCGTAGATGCCGTCAATGCTATCCTCTTTCATGTCGATA--AGGAA 167298
Query 156278 GCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAAT 156337
||| || | ||||| ||| || || || ||||| || || |||| || || |
Sbjct 167297 GCAGGAGGACATCTGAGGGGATGGAGTACCGGCATTGAACAGCGTCGGTGAGGCGTGTGT 167238
Query 156338 AAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTG 156397
|| || || | ||||| || || || ||||| | |||||||| | |||||
Sbjct 167237 GAAGTATTTTTGTGACATGTAGTCATAGGTCTCAATGGCCTTCTCAATGTCCTCGCCGTG 167178
Query 156398 AATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAAT 156457
|||| || || || | ||| ||| ||||| || ||||| ||| | ||||| ||
Sbjct 167177 GATACCGACAGCAACACGCATGAGCATGTGCTGTGGGCGCTCGGCAACCTTGCCATCTAT 167118
Query 156458 TCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAA 156497
|| || ||||||| ||| || || || || || || |||
Sbjct 167117 GCGGAGGAGGTATGAGCGCTCAAGTGTCTTGAAGCCAAAA 167078
>seq109
Length=223701
Score = 125 bits (138), Expect = 2e-23
Identities = 393/594 (66%), Gaps = 26/594 (4%)
Strand=Plus/Minus
Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGC-GTCATATAGCCG 251465
|| |||||||| | | |||||||| || |||| ||||| || | || | | || ||
Sbjct 193432 ATCAGACCACAGATGTCGCACACATGTACCGTGTACGCATCCGAGACTGTGA-AGAGACG 193374
Query 251466 ACCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAA 251525
|||| ||| || |||||||| | |||||||||||||| ||||| || |||||
Sbjct 193373 CTCCTTCAGGAAAGCAGCAGCACCGTGGGCGATCATACAATCACGTTCCATCTCTCCGAA 193314
Query 251526 ACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGG 251585
||||||||||||||| | ||| | ||||||| ||||||| ||||| ||| | | ||
Sbjct 193313 ACGAAGACCACCATCCCTAGCACGACCCTCGACAGGCTGGCGAGTAAGAATCTGTAGCGG 193254
Query 251586 ACC----GATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGA 251641
||| | ||||| || ||| || | |||||||| | ||||||||||||
Sbjct 193253 ACCACGAGCGCGAGCGTGGATTTTG----TCGTCGACCATATGTCTCAGACGCTGGTAGT 193198
Query 251642 ATGCGGGACCGATGAAGATGCTCGAAGGCATTTGCTCTCCAGTTAGAGCGTTATACATAA 251701
| | ||||| | |||||| || ||| || || ||||| | |||| ||||| |
Sbjct 193197 ACGTCGGACCCAAGAAGATTTGCGTCCGCAATTTCTTACCAGTGTGGCCGTTGTACATGA 193138
Query 251702 CTTCGTTTCCATTAGATTC--ATAACCAAGTTTCTGTAGC-TCTGAAGCAATATCACCAA 251758
||| ||| | ||| || ||| | | ||| ||| || || | | | |
Sbjct 193137 TCTCGAAACCA--CGCTTCTGGTATCCAGCATCTTCCAGCAACTG-AGAGATCTGATCGA 193081
Query 251759 TCTTGAATTTGCTAAAACTGGTGCCGTCTCCGTAAAGACC--CATTTGAATCAACACTTT 251816
| ||| | | | || ||| |||| || | | || | | | | |||| |||
Sbjct 193080 CCGTGACATCGGTGAACGGTGTGGCGTCACCCTCCTGTCCGGTAATGGCACCAAC-CTTG 193022
Query 251817 GCCTAAAAGTGTCTCTTTCAGTTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATT 251876
| | | || || || ||||| || ||||||||| ||||| || || || ||
Sbjct 193021 GAC-AGCAGACATTCAACCAAATGGGCAATTGTCATACGAGACGGAATGGCGTGAGGGTT 192963
Query 251877 GATGATGATGTCGGGTTTCAGTCCATCAGCAGTGAAGGGCATATCCTTTTCC--TCAATA 251934
|||||||| || ||| ||| || || ||||| |||||||| |||| || ||
Sbjct 192962 GATGATGAGATCTGGTGTCACACCTTCCCTGGTGAAAGGCATATC---TTCCTGTCGGTA 192906
Query 251935 -ATGTTTCCAATAGTTCCCTTTTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987
| | ||||| || || ||||| |||||||||||| ||||| ||||||||
Sbjct 192905 GGTAATACCAATCGTACCTTTTTGACCGTGACGAGAAGCAAACTTGTCACCAAT 192852
>seq214
Length=233559
Score = 98.7 bits (108), Expect = 3e-15
Identities = 93/119 (78%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 354016 GCGAGAGCACCAAGCGAGTCACGGTCGAGGAAATTAGTAGGTTCGTCAAGGATAAGAACG 354075
|| ||| ||||||| ||||||||||| | ||| || ||||| |||||||||| ||||
Sbjct 87174 GCAAGACCACCAAGAGAGTCACGGTCCAAGAAGTTGGTAGGCTCGTCAAGGACGAGAAGA 87115
Query 354076 TGCGGCTCCATCCACATTGCTGCAGCCAGAACTACCTTAACCTTCTGTCCGCCTGATAG 354134
||||| | ||||||| || |||| || || ||||| ||||||||||| || || ||
Sbjct 87114 TGCGGGTTGTTCCACATGGCACCAGCAAGCACGACCTTGACCTTCTGTCCTCCAGAGAG 87056
>seq132
Length=48160
Score = 84.2 bits (92), Expect = 6e-11
Identities = 110/152 (72%), Gaps = 3/152 (2%)
Strand=Plus/Minus
Query 301816 ATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAAG 301875
||||| | | ||| || |||||| |||| ||||| |||||| | |||||||||||
Sbjct 37643 ATTTCCTTGAGACGTGGCACACCAAGGGTGACGTT---CTTGGAAGACACACCAGCAAAA 37587
Query 301876 TGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATCATA 301935
||||| || || || || | || |||| ||||||||||| || || |||| || |
Sbjct 37586 TGGAAGGTGTTGAGCGTCATCTGCGTAGCGGGCTCACCAATGGACTGGGCTGCAAGCACA 37527
Query 301936 CCAACCATTTCTCCTGGTGCTACAATAGACTT 301967
|| ||||| || || || || ||| || |||
Sbjct 37526 CCGACCATCTCACCAGGAGCGACAGCAGCCTT 37495
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471810547234038
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |