Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01-
12] 374 sequences; 33,379,470 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq374 141 1e-27
seq353 134 2e-25
seq154 120 4e-21
seq188 109 7e-18
seq120 87.8 2e-11
>seq374
Length=272507
Score = 141 bits (156), Expect = 1e-27
Identities = 130/162 (80%), Gaps = 2/162 (1%)
Strand=Plus/Plus
Query 1592132 TGGGACAAGGAGTTT-TGCGACGTCGAGCAGCCCACCCTCTTTGAGTTGATCCTCGCCGC 1592190
||||| || |||| ||| | ||||| ||| | ||||| ||| | |||||||||||
Sbjct 246470 TGGGATCAGAAGTTCATGC-AGGTCGACCAGGAGATGCTCTTCGAGATTATCCTCGCCGC 246528
Query 1592191 CAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGAT 1592250
||||||||||||||||||| | || || || | || |||||| | || |||||||||||
Sbjct 246529 CAACTACCTCGACATCAAGGCCCTTCTGGACGTCGGTTGCAAGACGGTCGCCAACATGAT 246588
Query 1592251 CAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACAT 1592292
||||||||| || ||||| |||||||||||||| || |||||
Sbjct 246589 CAAGGGCAAATCTCCCGACGAGATCCGCAAGACTTTCAACAT 246630
>seq353
Length=170802
Score = 134 bits (148), Expect = 2e-25
Identities = 113/139 (81%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 19045 AGGACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCG 19104
|||||||||| |||||||| ||||||||||| | ||| ||| | ||||| || |
Sbjct 118153 AGGACAGCATAGGCGGCACTGTGACGTGCGTCATCAGAAACTGCCCGACGGGCCTGGGAG 118094
Query 19105 AGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCA 19164
|||| |||||||||||| |||||||| ||| | ||||||||||||||||| || || |
Sbjct 118093 AGCCATGCTTTGACAAGCTCGAGGCCAAGCTGGGACACGCCATGCTGTCGATTCCAGCAA 118034
Query 19165 CCAAGGGATTCGAGATTGG 19183
|||||||||| ||||||||
Sbjct 118033 CCAAGGGATTTGAGATTGG 118015
>seq154
Length=40832
Score = 120 bits (132), Expect = 4e-21
Identities = 175/244 (72%), Gaps = 4/244 (2%)
Strand=Plus/Minus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| ||| || || || ||| |||||| |||||||||||||| | ||||||||
Sbjct 13787 GCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCAAGCGAGATG 13728
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGA--GCGACG 868808
|||||| | || ||||||| | | ||| ||| | || | |||| |
Sbjct 13727 TTCTCCATGAAGTCAAAGGGGTTGGTGGCGTGGTAAACCTTGGTGTTGCCCAATGCGA-G 13669
Query 868809 CGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGA 868868
| ||||| || || ||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct 13668 C-AGCAGACGATCAGCGACAAACTCAATGTACTGGCACATGAGCTTGGCGTTCATGCCGA 13610
Query 868869 TGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGA 868928
|| || ||||| | ||||| | ||||||| ||| |||| || |||||| ||
Sbjct 13609 GCAGAGCACAGGGCAGAGCGTCGCTGAGGAACTCTTGCTCAATCTGAACAGCCTCGGTGA 13550
Query 868929 TGAT 868932
||||
Sbjct 13549 TGAT 13546
Score = 111 bits (122), Expect = 2e-18
Identities = 178/254 (70%), Gaps = 4/254 (2%)
Strand=Plus/Minus
Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692
||||||| |||||| || ||||||||||||||| ||| | | |||| | | ||
Sbjct 13141 GAGTGGACGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGCGCCTCGGGTATCTGT 13082
Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752
|| || | ||| || || ||||||||||| |||||||| ||| |||||| ||
Sbjct 13081 ACTTCGCTGGAGAAACGCTCGACCAGGTTCTCGTTGACGATGCCATCGGAGGCGGCAAAG 13022
Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCT---GAGCGACACCCAGTGG 869809
|| || |||||||| ||| || ||||||||||||| | | || ||||| |
Sbjct 13021 AAGGCGAGGACGTGGGAGATGAAAAAGCGCTCGTCGTCGTTCAGGCGCTTGTTCCAGTCG 12962
Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869
|| | ||| || | ||||||||||||||||| || ||||||||||| |||
Sbjct 12961 TGAAGATCCTTGGAGAGATCAATCTCCTCGGCGGTCCAGAAAGA-GCCTCGGCCTTCTTG 12903
Query 869870 TACATCTCCCATAC 869883
||||| | ||| ||
Sbjct 12902 TACATTTGCCAGAC 12889
>seq188
Length=237477
Score = 109 bits (120), Expect = 7e-18
Identities = 179/258 (69%), Gaps = 0/258 (0%)
Strand=Plus/Minus
Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124
|||||||||||| || || |||| || | || |||||||| || | || ||||| ||
Sbjct 167507 CTGGTCGACGTAACGAGCAGTGTTATTGTATACACGGAGCATAGGGATAAGACCGTTTGA 167448
Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184
||||||||||| | | ||| | ||||| ||| || | |||| || | ||
Sbjct 167447 TGTTCCGTTGGTGCCGCCAATGTATGAGCCGGTGGCACGGATTCGGTGCACGTTGAGACC 167388
Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244
|| ||||| || | ||||||||| | || ||| ||||| |||||||||||||| ||
Sbjct 167387 AATACCGCCAGCGGTCTTGGAGATCAAGGCACACGTCTTGAGAGTGTCGTAGATGCCGTC 167328
Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304
|| || | |||||||| | || ||||| || || | || ||| | || ||
Sbjct 167327 AATGCTATCCTCTTTCATGTCGATAAGGAAGCAGGAGGACATCTGAGGGGATGGAGTACC 167268
Query 1630305 GGCGTTGAAGAGCGTGGG 1630322
||| ||||| ||||| ||
Sbjct 167267 GGCATTGAACAGCGTCGG 167250
Score = 105 bits (116), Expect = 8e-17
Identities = 105/136 (77%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 1628465 TCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGA 1628524
||||||| ||||| ||||| || || || || ||||||||||||||||||||| ||
Sbjct 167643 TCCACAGAGCGTAGAAGAGATCACGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGGA 167584
Query 1628525 GGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCT 1628584
||||||| || | | ||||| |||||||| ||||| |||||| ||||||||| ||
Sbjct 167583 GGTCGAGGAAGCCAAAGATGTCAGCGTGCCATGGCTCGAGGTAGATGGCAAAGGCACCTG 167524
Query 1628585 TGCGCTTGCCGCCGCC 1628600
|||||| ||| ||
Sbjct 167523 GACGCTTGTTGCCACC 167508
>seq120
Length=58476
Score = 87.8 bits (96), Expect = 2e-11
Identities = 92/121 (76%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 450793 TGGCCGATGCGGTGCACGCGGTCGACGGCCTGCGCCTCGGCAAACGGATTGTAGTGCGCG 450852
|| |||| || || |||||||||||||| |||||||||||| ||| ||| | ||||
Sbjct 45883 TGACCGAGACGATGGACGCGGTCGACGGCTTGCGCCTCGGCAGCCGGGTTGAACTGCGGT 45824
Query 450853 TCCATGAGCAGCACATAGTTGGCGCACACGAGGTTGAGGCCGACGCTGCCCACGCCGATG 450912
||||| | | || | ||||||| |||||||||||||| || ||| ||||||||
Sbjct 45823 TCCATCATGAAGACCTTGTTGGCGGTGGTGAGGTTGAGGCCGAGGCCGCCAGCGCCGATG 45764
Query 450913 G 450913
|
Sbjct 45763 G 45763
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107108507808558
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |