Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01- 12] 374 sequences; 33,379,470 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq374 141 1e-27 seq353 134 2e-25 seq154 120 4e-21 seq188 109 7e-18 seq120 87.8 2e-11 >seq374 Length=272507 Score = 141 bits (156), Expect = 1e-27 Identities = 130/162 (80%), Gaps = 2/162 (1%) Strand=Plus/Plus Query 1592132 TGGGACAAGGAGTTT-TGCGACGTCGAGCAGCCCACCCTCTTTGAGTTGATCCTCGCCGC 1592190 ||||| || |||| ||| | ||||| ||| | ||||| ||| | ||||||||||| Sbjct 246470 TGGGATCAGAAGTTCATGC-AGGTCGACCAGGAGATGCTCTTCGAGATTATCCTCGCCGC 246528 Query 1592191 CAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGAT 1592250 ||||||||||||||||||| | || || || | || |||||| | || ||||||||||| Sbjct 246529 CAACTACCTCGACATCAAGGCCCTTCTGGACGTCGGTTGCAAGACGGTCGCCAACATGAT 246588 Query 1592251 CAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACAT 1592292 ||||||||| || ||||| |||||||||||||| || ||||| Sbjct 246589 CAAGGGCAAATCTCCCGACGAGATCCGCAAGACTTTCAACAT 246630 >seq353 Length=170802 Score = 134 bits (148), Expect = 2e-25 Identities = 113/139 (81%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 19045 AGGACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCG 19104 |||||||||| |||||||| ||||||||||| | ||| ||| | ||||| || | Sbjct 118153 AGGACAGCATAGGCGGCACTGTGACGTGCGTCATCAGAAACTGCCCGACGGGCCTGGGAG 118094 Query 19105 AGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCA 19164 |||| |||||||||||| |||||||| ||| | ||||||||||||||||| || || | Sbjct 118093 AGCCATGCTTTGACAAGCTCGAGGCCAAGCTGGGACACGCCATGCTGTCGATTCCAGCAA 118034 Query 19165 CCAAGGGATTCGAGATTGG 19183 |||||||||| |||||||| Sbjct 118033 CCAAGGGATTTGAGATTGG 118015 >seq154 Length=40832 Score = 120 bits (132), Expect = 4e-21 Identities = 175/244 (72%), Gaps = 4/244 (2%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| |||||||||||||| | |||||||| Sbjct 13787 GCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCAAGCGAGATG 13728 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGA--GCGACG 868808 |||||| | || ||||||| | | ||| ||| | || | |||| | Sbjct 13727 TTCTCCATGAAGTCAAAGGGGTTGGTGGCGTGGTAAACCTTGGTGTTGCCCAATGCGA-G 13669 Query 868809 CGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGA 868868 | ||||| || || ||||||||||| ||||||||||||||||| |||||||||||||| Sbjct 13668 C-AGCAGACGATCAGCGACAAACTCAATGTACTGGCACATGAGCTTGGCGTTCATGCCGA 13610 Query 868869 TGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGA 868928 || || ||||| | ||||| | ||||||| ||| |||| || |||||| || Sbjct 13609 GCAGAGCACAGGGCAGAGCGTCGCTGAGGAACTCTTGCTCAATCTGAACAGCCTCGGTGA 13550 Query 868929 TGAT 868932 |||| Sbjct 13549 TGAT 13546 Score = 111 bits (122), Expect = 2e-18 Identities = 178/254 (70%), Gaps = 4/254 (2%) Strand=Plus/Minus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 ||||||| |||||| || ||||||||||||||| ||| | | |||| | | || Sbjct 13141 GAGTGGACGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGCGCCTCGGGTATCTGT 13082 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 || || | ||| || || ||||||||||| |||||||| ||| |||||| || Sbjct 13081 ACTTCGCTGGAGAAACGCTCGACCAGGTTCTCGTTGACGATGCCATCGGAGGCGGCAAAG 13022 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCT---GAGCGACACCCAGTGG 869809 || || |||||||| ||| || ||||||||||||| | | || ||||| | Sbjct 13021 AAGGCGAGGACGTGGGAGATGAAAAAGCGCTCGTCGTCGTTCAGGCGCTTGTTCCAGTCG 12962 Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869 || | ||| || | ||||||||||||||||| || ||||||||||| ||| Sbjct 12961 TGAAGATCCTTGGAGAGATCAATCTCCTCGGCGGTCCAGAAAGA-GCCTCGGCCTTCTTG 12903 Query 869870 TACATCTCCCATAC 869883 ||||| | ||| || Sbjct 12902 TACATTTGCCAGAC 12889 >seq188 Length=237477 Score = 109 bits (120), Expect = 7e-18 Identities = 179/258 (69%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||||||||| || || |||| || | || |||||||| || | || ||||| || Sbjct 167507 CTGGTCGACGTAACGAGCAGTGTTATTGTATACACGGAGCATAGGGATAAGACCGTTTGA 167448 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 ||||||||||| | | ||| | ||||| ||| || | |||| || | || Sbjct 167447 TGTTCCGTTGGTGCCGCCAATGTATGAGCCGGTGGCACGGATTCGGTGCACGTTGAGACC 167388 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 || ||||| || | ||||||||| | || ||| ||||| |||||||||||||| || Sbjct 167387 AATACCGCCAGCGGTCTTGGAGATCAAGGCACACGTCTTGAGAGTGTCGTAGATGCCGTC 167328 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || || | |||||||| | || ||||| || || | || ||| | || || Sbjct 167327 AATGCTATCCTCTTTCATGTCGATAAGGAAGCAGGAGGACATCTGAGGGGATGGAGTACC 167268 Query 1630305 GGCGTTGAAGAGCGTGGG 1630322 ||| ||||| ||||| || Sbjct 167267 GGCATTGAACAGCGTCGG 167250 Score = 105 bits (116), Expect = 8e-17 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 1628465 TCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGA 1628524 ||||||| ||||| ||||| || || || || ||||||||||||||||||||| || Sbjct 167643 TCCACAGAGCGTAGAAGAGATCACGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGGA 167584 Query 1628525 GGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCT 1628584 ||||||| || | | ||||| |||||||| ||||| |||||| ||||||||| || Sbjct 167583 GGTCGAGGAAGCCAAAGATGTCAGCGTGCCATGGCTCGAGGTAGATGGCAAAGGCACCTG 167524 Query 1628585 TGCGCTTGCCGCCGCC 1628600 |||||| ||| || Sbjct 167523 GACGCTTGTTGCCACC 167508 >seq120 Length=58476 Score = 87.8 bits (96), Expect = 2e-11 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 450793 TGGCCGATGCGGTGCACGCGGTCGACGGCCTGCGCCTCGGCAAACGGATTGTAGTGCGCG 450852 || |||| || || |||||||||||||| |||||||||||| ||| ||| | |||| Sbjct 45883 TGACCGAGACGATGGACGCGGTCGACGGCTTGCGCCTCGGCAGCCGGGTTGAACTGCGGT 45824 Query 450853 TCCATGAGCAGCACATAGTTGGCGCACACGAGGTTGAGGCCGACGCTGCCCACGCCGATG 450912 ||||| | | || | ||||||| |||||||||||||| || ||| |||||||| Sbjct 45823 TCCATCATGAAGACCTTGTTGGCGGTGGTGAGGTTGAGGCCGAGGCCGCCAGCGCCGATG 45764 Query 450913 G 450913 | Sbjct 45763 G 45763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107108507808558