Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01- 12] 374 sequences; 33,379,470 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq188 178 1e-39 seq290 104 2e-17 >seq188 Length=237477 Score = 178 bits (196), Expect = 1e-39 Identities = 936/1476 (63%), Gaps = 60/1476 (4%) Strand=Plus/Minus Query 138501 GTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGG 138560 ||| | |||||| || ||||| || | || || || ||| |||||| |||| | || Sbjct 168560 GTTGACGACCTGGAACTCACCCGCGAGCACACGGCGTGAGTAGATGTTGGAGGTGTAGGG 168501 Query 138561 CTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCAC 138620 ||| || | || |||||||| |||||||||| || | || || ||||| || | Sbjct 168500 CTCGAAGCACTCATTGTTTCCGAGAATCTGAGAGGTCGAGGCAGTTGGCATAGGTGCAAT 168441 Query 138621 CAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCA 138680 || || || || || | |||||| | ||| |||| || | ||||||||| Sbjct 168440 CAGCAGCGAGTTGCGGACACCGTGCTGAGCGATCTTGGCCTTCAGTTCAGCCCAGTCCCA 168381 Query 138681 CAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCC----AAACTTGCGG 138736 | |||| | || | ||||||||| || ||||| | || ||| | || | || Sbjct 168380 GAGATCGGTGGGGGTAACGTTCCACATGTCATACTGAAGGATACCCTGTGAGAC--GGGG 168323 Query 138737 GACTGCCTTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGA 138796 || || ||||| | ||||| ||||| ||| | || | ||| | | | Sbjct 168322 GAT--CCCTCGTAGGTCTCGTAAGGACCAAGCTCCTTGGCAATGTCGCAGGAGGAGGTCA 168265 Query 138797 GCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCT 138856 | ||| ||| ||| || || ||| ||||| |||||| ||||||||| || Sbjct 168264 GAGCAGCATGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCGGCCGACT 168205 Query 138857 CGTACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAG 138916 || | |||| ||| || ||| || || ||||| |||||||| |||| || | | Sbjct 168204 CGAATGGCAGGCGCAGTGCGAGGAAAGCATCAGCCAGACCTTGCACACCCATACCAATGG 168145 Query 138917 GGCGATGGCGCAGATTTGACGCTTTTGCGGCT--TCGATAGGATAATAGTTTACATCGAT 138974 | || ||||| | | ||| || ||| || |||| || || | ||| ||||| || Sbjct 168144 GTCGGTGGCGGA-AGTTGCTGCGGC-GCGCCTCCTCGACGGGGTAGTGGTTGACATCAAT 168087 Query 138975 GATTTTGTTTAAATTTCGCACGACCACCTTAGT-----CGTA----TGCTTTAATCGTTC 139025 ||| ||||| || || || ||| |||| || ||| | ||| || || Sbjct 168086 GATCTTGTTCAAGTTGCGAGTGACAACCTGGGTGACCTCGTGGAGCTTCTTGAAG---TC 168030 Query 139026 AAAATCGTATGTGCCCCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGA 139085 ||| || || | |||| |||||| | | || | | || | || Sbjct 168029 AAACTCT------CCGCGCTTGTAGTCGACAAAGG----AAGGCAG--GGCA---AGGGA 167985 Query 139086 GGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAA 139145 ||| | |||||| || || || ||||| ||| | |||| |||| |||||| | |||| Sbjct 167984 GGCCAAGTTGCAGACAGCGACCTCGTCAGGGGCAGTGTACTCGATAATTTCCGTGCACAG 167925 Query 139146 ATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTT 139205 || | || ||||| | || | || ||||| || ||||| |||||||| || Sbjct 167924 GTTGGAGCTGCGAATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTT 167865 Query 139206 GTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTC 139265 ||| ||||| | || | ||||| || || | ||| | |||| | ||| | Sbjct 167864 GTAGAGCATGAAGGGATTACCAGTCTCGGTCTGGGCCTCGAGAATGGCATACCACAGCTT 167805 Query 139266 CCTAGCTTGTA---TTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTC 139322 | || | | | | ||| | | |||| | |||||| | ||||| || | Sbjct 167804 CTGGGCGCGGACAGTCTCACGGCCCTT--GTTCTGCTT-CTCGTAGCTCTCGTACAGCGC 167748 Query 139323 GTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGA 139382 || || || |||||| | |||| || | | |||| || || |||||||| | Sbjct 167747 CTCAAACTCCTCGCCGTAGACATCAGCCAGGCCAGGGCACTCGTTGGGGCACATGAGAGT 167688 Query 139383 CCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAG 139442 ||| |||||||| | | ||| ||| ||||||||||||| |||||||||| |||| | | Sbjct 167687 CCACTCGCCGTTCTCTTGGACACGCTTCATGAACAGATCGGGAATCCACAGAGCGTAGAA 167628 Query 139443 CAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTC--ATGTTAAGGAAATCA 139500 | ||| || || || ||| || ||| || | | || ||||| || Sbjct 167627 GAGATCACGGGCGCGAACCTCCTCCTTGCCGTGGTTC--TTGCGGAGGTCGAGGAAGCCA 167570 Query 139501 AAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTTG---CCA 139557 || | ||||||||||||||| || || |||||||| | || ||| || ||| ||| Sbjct 167569 AAGATGTCAGCGTGCCATGGCTCGAGGTAGATGGCAAAGGCACCTGGACGCTTGTTGCCA 167510 Query 139558 CCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTC 139617 || || ||||||| || ||| |||||| |||| || | ||| || |||||| | Sbjct 167509 CCCTGGTCGACGTAACGAGCAGTGTTATTGTATACACGGAGCATAGGGATAAGACCGTTT 167450 Query 139618 GCTGTTCCGTTGGTGCTACGGATG---GGACTGTTGCGAGCTCGGACGTCATGTACATTG 139674 | |||||||||||||| | ||| | | | || || |||| || || ||| Sbjct 167449 GATGTTCCGTTGGTGCCGCCAATGTATGAGCCGGTG---GCACGGATTCGGTGCACGTTG 167393 Query 139675 ATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCA-ATCGCGTAATGTCTCGTATAT 139733 | || || ||||| | ||||| || || | || || | | || ||||| || Sbjct 167392 AGACCAATACCGCCAGCGGTCTTGGAGATCAAGGCACACGTCTTG-AGAGTGTCGTAGAT 167334 Query 139734 ACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTT 139793 || ||||| || || | ||| || || ||||| || || | || || | Sbjct 167333 GCCGTCAATGCTATCCTCTTTCATGTCGATAAGGAAGCAGGAGGACATCTGAGGGGATGG 167274 Query 139794 CGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTC 139853 || ||||| ||||| || || ||||| ||||| || || ||||| | || Sbjct 167273 AGTACCGGCATTGAACAGCGTCGGTGAGGCGTGTGTGAAGTATTTTTGTGACATGTAGTC 167214 Query 139854 GTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAG 139913 || || || ||||| || |||| ||| |||||||||||||||| || ||||| || Sbjct 167213 ATAGGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGGATACCGACAGCAACACGCATGAG 167154 Query 139914 CATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAT 139949 ||| || || || ||||| ||| ||| || || Sbjct 167153 CATGTGCTGTGGGCGCTCGGCAACCTTGCCATCTAT 167118 >seq290 Length=256071 Score = 104 bits (114), Expect = 2e-17 Identities = 134/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787 ||||| || || || |||||||| || || || ||||||| | || | || || Sbjct 202208 ACCGGCAAGACCATCACGCTCGAGGTCGAGTCCTCCGACACTATCGACAATGTCAAGACC 202267 Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 ||||| || ||||| || || || || || || || || || |||||||||||||| || Sbjct 202268 AAGATTCAGGACAAGGAGGGTATTCCCCCAGACCAGCAGCGCTTGATCTTTGCCGGCAAG 202327 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 ||||| || || | | | |||| || || ||||||||||||||||| || || ||| Sbjct 202328 CAGCTTGAAGACGGTCGCACCCTGTCCGACTACAACATTCAAAAGGAATCCACCCTCCAC 202387 Query 24908 TTGGT 24912 |||| Sbjct 202388 CTGGT 202392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449895496728720