Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01-
12] 374 sequences; 33,379,470 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq188 178 1e-39
seq290 104 2e-17
>seq188
Length=237477
Score = 178 bits (196), Expect = 1e-39
Identities = 936/1476 (63%), Gaps = 60/1476 (4%)
Strand=Plus/Minus
Query 138501 GTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGG 138560
||| | |||||| || ||||| || | || || || ||| |||||| |||| | ||
Sbjct 168560 GTTGACGACCTGGAACTCACCCGCGAGCACACGGCGTGAGTAGATGTTGGAGGTGTAGGG 168501
Query 138561 CTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCAC 138620
||| || | || |||||||| |||||||||| || | || || ||||| || |
Sbjct 168500 CTCGAAGCACTCATTGTTTCCGAGAATCTGAGAGGTCGAGGCAGTTGGCATAGGTGCAAT 168441
Query 138621 CAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCA 138680
|| || || || || | |||||| | ||| |||| || | |||||||||
Sbjct 168440 CAGCAGCGAGTTGCGGACACCGTGCTGAGCGATCTTGGCCTTCAGTTCAGCCCAGTCCCA 168381
Query 138681 CAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCC----AAACTTGCGG 138736
| |||| | || | ||||||||| || ||||| | || ||| | || | ||
Sbjct 168380 GAGATCGGTGGGGGTAACGTTCCACATGTCATACTGAAGGATACCCTGTGAGAC--GGGG 168323
Query 138737 GACTGCCTTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGA 138796
|| || ||||| | ||||| ||||| ||| | || | ||| | | |
Sbjct 168322 GAT--CCCTCGTAGGTCTCGTAAGGACCAAGCTCCTTGGCAATGTCGCAGGAGGAGGTCA 168265
Query 138797 GCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCT 138856
| ||| ||| ||| || || ||| ||||| |||||| ||||||||| ||
Sbjct 168264 GAGCAGCATGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCGGCCGACT 168205
Query 138857 CGTACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAG 138916
|| | |||| ||| || ||| || || ||||| |||||||| |||| || | |
Sbjct 168204 CGAATGGCAGGCGCAGTGCGAGGAAAGCATCAGCCAGACCTTGCACACCCATACCAATGG 168145
Query 138917 GGCGATGGCGCAGATTTGACGCTTTTGCGGCT--TCGATAGGATAATAGTTTACATCGAT 138974
| || ||||| | | ||| || ||| || |||| || || | ||| ||||| ||
Sbjct 168144 GTCGGTGGCGGA-AGTTGCTGCGGC-GCGCCTCCTCGACGGGGTAGTGGTTGACATCAAT 168087
Query 138975 GATTTTGTTTAAATTTCGCACGACCACCTTAGT-----CGTA----TGCTTTAATCGTTC 139025
||| ||||| || || || ||| |||| || ||| | ||| || ||
Sbjct 168086 GATCTTGTTCAAGTTGCGAGTGACAACCTGGGTGACCTCGTGGAGCTTCTTGAAG---TC 168030
Query 139026 AAAATCGTATGTGCCCCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGA 139085
||| || || | |||| |||||| | | || | | || | ||
Sbjct 168029 AAACTCT------CCGCGCTTGTAGTCGACAAAGG----AAGGCAG--GGCA---AGGGA 167985
Query 139086 GGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAA 139145
||| | |||||| || || || ||||| ||| | |||| |||| |||||| | ||||
Sbjct 167984 GGCCAAGTTGCAGACAGCGACCTCGTCAGGGGCAGTGTACTCGATAATTTCCGTGCACAG 167925
Query 139146 ATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTT 139205
|| | || ||||| | || | || ||||| || ||||| |||||||| ||
Sbjct 167924 GTTGGAGCTGCGAATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTT 167865
Query 139206 GTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTC 139265
||| ||||| | || | ||||| || || | ||| | |||| | ||| |
Sbjct 167864 GTAGAGCATGAAGGGATTACCAGTCTCGGTCTGGGCCTCGAGAATGGCATACCACAGCTT 167805
Query 139266 CCTAGCTTGTA---TTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTC 139322
| || | | | | ||| | | |||| | |||||| | ||||| || |
Sbjct 167804 CTGGGCGCGGACAGTCTCACGGCCCTT--GTTCTGCTT-CTCGTAGCTCTCGTACAGCGC 167748
Query 139323 GTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGA 139382
|| || || |||||| | |||| || | | |||| || || |||||||| |
Sbjct 167747 CTCAAACTCCTCGCCGTAGACATCAGCCAGGCCAGGGCACTCGTTGGGGCACATGAGAGT 167688
Query 139383 CCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAG 139442
||| |||||||| | | ||| ||| ||||||||||||| |||||||||| |||| | |
Sbjct 167687 CCACTCGCCGTTCTCTTGGACACGCTTCATGAACAGATCGGGAATCCACAGAGCGTAGAA 167628
Query 139443 CAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTC--ATGTTAAGGAAATCA 139500
| ||| || || || ||| || ||| || | | || ||||| ||
Sbjct 167627 GAGATCACGGGCGCGAACCTCCTCCTTGCCGTGGTTC--TTGCGGAGGTCGAGGAAGCCA 167570
Query 139501 AAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTTG---CCA 139557
|| | ||||||||||||||| || || |||||||| | || ||| || ||| |||
Sbjct 167569 AAGATGTCAGCGTGCCATGGCTCGAGGTAGATGGCAAAGGCACCTGGACGCTTGTTGCCA 167510
Query 139558 CCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTC 139617
|| || ||||||| || ||| |||||| |||| || | ||| || |||||| |
Sbjct 167509 CCCTGGTCGACGTAACGAGCAGTGTTATTGTATACACGGAGCATAGGGATAAGACCGTTT 167450
Query 139618 GCTGTTCCGTTGGTGCTACGGATG---GGACTGTTGCGAGCTCGGACGTCATGTACATTG 139674
| |||||||||||||| | ||| | | | || || |||| || || |||
Sbjct 167449 GATGTTCCGTTGGTGCCGCCAATGTATGAGCCGGTG---GCACGGATTCGGTGCACGTTG 167393
Query 139675 ATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCA-ATCGCGTAATGTCTCGTATAT 139733
| || || ||||| | ||||| || || | || || | | || ||||| ||
Sbjct 167392 AGACCAATACCGCCAGCGGTCTTGGAGATCAAGGCACACGTCTTG-AGAGTGTCGTAGAT 167334
Query 139734 ACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTT 139793
|| ||||| || || | ||| || || ||||| || || | || || |
Sbjct 167333 GCCGTCAATGCTATCCTCTTTCATGTCGATAAGGAAGCAGGAGGACATCTGAGGGGATGG 167274
Query 139794 CGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTC 139853
|| ||||| ||||| || || ||||| ||||| || || ||||| | ||
Sbjct 167273 AGTACCGGCATTGAACAGCGTCGGTGAGGCGTGTGTGAAGTATTTTTGTGACATGTAGTC 167214
Query 139854 GTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAG 139913
|| || || ||||| || |||| ||| |||||||||||||||| || ||||| ||
Sbjct 167213 ATAGGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGGATACCGACAGCAACACGCATGAG 167154
Query 139914 CATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAT 139949
||| || || || ||||| ||| ||| || ||
Sbjct 167153 CATGTGCTGTGGGCGCTCGGCAACCTTGCCATCTAT 167118
>seq290
Length=256071
Score = 104 bits (114), Expect = 2e-17
Identities = 134/185 (72%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787
||||| || || || |||||||| || || || ||||||| | || | || ||
Sbjct 202208 ACCGGCAAGACCATCACGCTCGAGGTCGAGTCCTCCGACACTATCGACAATGTCAAGACC 202267
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
||||| || ||||| || || || || || || || || || |||||||||||||| ||
Sbjct 202268 AAGATTCAGGACAAGGAGGGTATTCCCCCAGACCAGCAGCGCTTGATCTTTGCCGGCAAG 202327
Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907
||||| || || | | | |||| || || ||||||||||||||||| || || |||
Sbjct 202328 CAGCTTGAAGACGGTCGCACCCTGTCCGACTACAACATTCAAAAGGAATCCACCCTCCAC 202387
Query 24908 TTGGT 24912
||||
Sbjct 202388 CTGGT 202392
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449895496728720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |