Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01- 12] 374 sequences; 33,379,470 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq97 100 2e-16 >seq97 Length=116226 Score = 100 bits (110), Expect = 2e-16 Identities = 223/334 (67%), Gaps = 8/334 (2%) Strand=Plus/Plus Query 34318 TCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGC 34377 || || || ||||| | |||| | || | || |||||| ||||| || || || Sbjct 31656 TCGGTTTCTGGGTTCTTGCATTTCTTGCAGAGGACGAACTTGGCAATGAAGCCGTCGAGA 31715 Query 34378 AGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAA 34437 |||||| | ||| || ||||||| |||||||| ||| | || |||| ||| Sbjct 31716 TAGTCCTGCAGCTTGCTGGCATCGTGGGCGCCGTTGATGATCCAACGGTCGTCGTTGG-- 31773 Query 34438 TCGACCTGCGTTTGC----GCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGC 34493 | | | ||||| ||||| |||||| | || |||||||| | || | || Sbjct 31774 --GGCTAGTGTTTGTCTGGGCGCCAAGCTCGAAACCAAAGTACTTGATGACGTGAGCGGG 31831 Query 34494 CGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTT 34553 || || | || | |||| | || |||||| |||||||||||||||||||| Sbjct 31832 AGGGCGGGCGAGTGAGCCAGCGACACTGCTCAGGTTGACAATGACAGTCTTGATGCCGTT 31891 Query 34554 GCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGC 34613 ||||| ||||| | ||||| ||| ||| ||| |||||||||||||| | || | Sbjct 31892 ACCCTTGCCTTCAATCTTGGACTGGATACGCTCCATCTTGTAGCGGTAGAAGGGATCGGT 31951 Query 34614 CACATTGCGGTTAACGTTCACAGTCCCCATCGTG 34647 |||| |||| || ||| || || |||| ||| Sbjct 31952 GACATCGCGGCGAATGTTGACGGTGGCCATGGTG 31985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412839718216382