Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01- 12] 374 sequences; 33,379,470 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq374 140 5e-27 seq208 132 8e-25 seq154 129 9e-24 seq188 116 6e-20 seq356 91.5 2e-12 seq329 86.0 1e-10 seq182 86.0 1e-10 >seq374 Length=272507 Score = 140 bits (154), Expect = 5e-27 Identities = 116/142 (82%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 2035612 AGGTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGC 2035671 |||||||||| | ||||| ||| | |||||||||||||||||||||||||||||| Sbjct 246489 AGGTCGACCAGGAGATGCTCTTCGAGATTATCCTCGCCGCCAACTACCTCGACATCAAGG 246548 Query 2035672 CCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGG 2035731 |||| || || | || |||||||| || |||||| | ||||||||||| || ||||| | Sbjct 246549 CCCTTCTGGACGTCGGTTGCAAGACGGTCGCCAACATGATCAAGGGCAAATCTCCCGACG 246608 Query 2035732 ACATCCGCAAGACCTTTAACAT 2035753 | ||||||||||| || ||||| Sbjct 246609 AGATCCGCAAGACTTTCAACAT 246630 >seq208 Length=240788 Score = 132 bits (146), Expect = 8e-25 Identities = 322/485 (66%), Gaps = 12/485 (2%) Strand=Plus/Plus Query 2018920 GGATCGAAAAGTACCG-CCCGACAGTGCTCGACGACATCGTGGGCAACGAGCACGCCGTT 2018978 || ||||||||||||| |||| | |||||||| |||| |||||| | || || Sbjct 99106 GGGTCGAAAAGTACCGTCCCGTCTAC-CTCGACGATGTCGTCGGCAACACTGAAACCATT 99164 Query 2018979 GCCTACCTCAAGGCGCTGGCCGCCGACGGCAACATGCCCAACCTCTTGCTGGCGGGCCCG 2019038 | ||||||| | ||| || ||||||||||| || | | | | ||| | Sbjct 99165 GAACGCCTCAAGATCATCGCCAAAGATGGCAACATGCCACACATGATCATCTCCGGCATG 99224 Query 2019039 CCCGGCACGGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCGTGCTCTTGGGCGCGGCC 2019098 || || | || ||||| ||| |||| |||||| || ||| ||| | |||| ||| Sbjct 99225 CCAGGTATCGGAAAGACAACGTCCATCCTGTGCCTCGCCCGCCAACTCCTCGGCGATGCC 99284 Query 2019099 GCCGACGAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGT 2019158 | | || ||||| ||||| |||||||| || |||||||| || | |||||||| || Sbjct 99285 TACAAAGAAGCCGTTCTCGAGCTCAATGCCTCCGACGAGCGTGGTATTGACGTCGTCCGC 99344 Query 2019159 AGAATCATCAAGCATCACGCTTCGAAAAGAA-----TCGACCTGCCGCCCGGCCGCCACA 2019213 | |||||| | | || | | |||| | |||| || ||| | || | Sbjct 99345 AATCGCATCAA-----AGGGTTTGCACAGAAGAAGGTTACATTGCCCCCGGGCAGACAAA 99399 Query 2019214 AGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCGAT 2019273 || | |||| ||||||||||| ||| || | ||| | || || ||||| ||| | Sbjct 99400 AGCTCGTCATTCTCGATGAGGCGGACAGCATGACGAGCGGTGCGCAACAGGCGCTCAGGA 99459 Query 2019274 CGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACACGTCGTCGA 2019333 ||| ||||||| |||| | ||| ||||| || || | || ||||| ||| | Sbjct 99460 GGACTATGGAAATCTACAGCTCCACCACGCGCTTCGCTTTTGCGTGCAATCAGTCCAACA 99519 Query 2019334 TGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGCCTCACCGACG 2019393 | ||||||| | || ||| | ||||||||| |||| | ||| || || || |||| Sbjct 99520 AGATCATCGAGCCGCTGCAGTCGAGATGCGCCATCCTGCGATATGCCCGTCTTACAGACG 99579 Query 2019394 CCCAG 2019398 ||||| Sbjct 99580 CCCAG 99584 >seq154 Length=40832 Score = 129 bits (142), Expect = 9e-24 Identities = 182/252 (72%), Gaps = 4/252 (2%) Strand=Plus/Minus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || || || || ||| |||||| |||||||||||||| | | Sbjct 13795 TGACACCAGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCAA 13736 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 ||||||| |||||| | || ||||||| | |||| ||| | || | Sbjct 13735 GCGAGATGTTCTCCATGAAGTCAAAGGGGTTGGTGGCGTGGTAAACCTTGGTGTTGCCCA 13676 Query 794011 --GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTT 794068 |||| ||| |||| || || ||||| || |||||||||||||||||||| |||||| Sbjct 13675 ATGCGA-GCA-GCAGACGATCAGCGACAAACTCAATGTACTGGCACATGAGCTTGGCGTT 13618 Query 794069 CATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGC 794128 |||||||| || || |||||| | ||||||| ||||||| ||| |||| || || Sbjct 13617 CATGCCGAGCAGAGCACAGGGCAGAGCGTCGCTGAGGAACTCTTGCTCAATCTGAACAGC 13558 Query 794129 CTCGATGATGAT 794140 |||| ||||||| Sbjct 13557 CTCGGTGATGAT 13546 >seq188 Length=237477 Score = 116 bits (128), Expect = 6e-20 Identities = 290/438 (66%), Gaps = 20/438 (5%) Strand=Plus/Minus Query 2071585 TCGGTGCACAGGTTGGCCGACATCG--TGGTGCCCAGGTTCTGCTGGTTGCTGGTCAGGT 2071642 || ||||||||||||| | || |||| |||||||||| ||||||||| | ||| Sbjct 167935 TCCGTGCACAGGTTGGAG--CTGCGAATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGT 167878 Query 2071643 TGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCGTGACGATGG 2071702 || || ||||||| |||||| |||| ||| |||||| |||| ||| || |||| Sbjct 167877 TGCAAGCATCCTTGTAGAGCATGAAGGGATTACCAGTCTCGGTCTGGGCCTCGAGAATGG 167818 Query 2071703 CCGACCAAA--TTTGGCGCGCGGGCAC---CGAGGTCCTCGCGCGGCC-CTNNNNNNNNN 2071756 | |||| | || | |||||| || | || ||| | | || || Sbjct 167817 CATACCACAGCTTCTGGGCGCGGACAGTCTCACGGCCCTTGTTCTGCTTCTCGTAGCTCT 167758 Query 2071757 NNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGCCTCGG 2071816 | || || ||||| | |||||| | || |||||| || |||| Sbjct 167757 CGT------ACAGCGCCTCAAACTCCTCGCCGTAGACATCAGCCAGGCCAGGGCACTCGT 167704 Query 2071817 ACGGGCAAAAGAGCGACCAGTCGCCG--CCAGTCACCACGCGGCGCATAAACAGGTCGCA 2071874 ||||| | ||| | ||| |||||| | | ||||| | || ||||| ||| Sbjct 167703 TGGGGCACATGAGAGTCCACTCGCCGTTCTCTTGGACACGCTTC--ATGAACAGATCGGG 167646 Query 2071875 CGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTT 2071934 ||||||| |||| |||||||| || || || ||||||||||||||||||||| Sbjct 167645 AATCCACAGAGCGTAGAAGAGATCACGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCG 167586 Query 2071935 CAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCC 2071994 |||||||| || | | || ||| |||||||| ||||| |||||| ||||||||| || Sbjct 167585 GAGGTCGAGGAAGCCAAAGATGTCAGCGTGCCATGGCTCGAGGTAGATGGCAAAGGCACC 167526 Query 2071995 CTTGCGCTTGCCGCCGCC 2072012 |||||| ||| || Sbjct 167525 TGGACGCTTGTTGCCACC 167508 Score = 105 bits (116), Expect = 1e-16 Identities = 178/258 (69%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 ||||||||| || || || |||| || | || |||||||| || | ||| ||||| || Sbjct 167507 CTGGTCGACGTAACGAGCAGTGTTATTGTATACACGGAGCATAGGGATAAGACCGTTTGA 167448 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 ||||||||||| | | ||| | ||| | ||| || | |||| || | || Sbjct 167447 TGTTCCGTTGGTGCCGCCAATGTATGAGCCGGTGGCACGGATTCGGTGCACGTTGAGACC 167388 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 || ||||| || | ||||||||| | || ||| | || || || ||||||||||| || Sbjct 167387 AATACCGCCAGCGGTCTTGGAGATCAAGGCACACGTCTTGAGAGTGTCGTAGATGCCGTC 167328 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 || || | |||||||| | || ||||| || || | || ||| | || || Sbjct 167327 AATGCTATCCTCTTTCATGTCGATAAGGAAGCAGGAGGACATCTGAGGGGATGGAGTACC 167268 Query 2073780 GGCATTGAAGAGCGTGGG 2073797 ||||||||| ||||| || Sbjct 167267 GGCATTGAACAGCGTCGG 167250 >seq356 Length=143691 Score = 91.5 bits (100), Expect = 2e-12 Identities = 157/225 (70%), Gaps = 6/225 (3%) Strand=Plus/Plus Query 2411376 ATCGTCGAG---ATCAATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGTCCTTGGT 2411432 ||||||||| ||||||||||||| | | || | |||||||| || ||||| Sbjct 72938 ATCGTCGAGGACATCAATCTTGGAGTCTGGATCCGAAGAACTCATCTTTCCA-CCTTGCA 72996 Query 2411433 GAGGCCCGGCACCAGCGGGTTGAGCAGGTGGATGCGCTTGCGGTAGCCCAGCGCCGGCAG 2411492 || || || |||| ||||| | || |||| ||||| ||| || | ||||| Sbjct 72997 GA--CCAGGAACCATGGGGTTCATCAAGTGGGCGCGCTCCTTGTAACCGATTTTGGGCAG 73054 Query 2411493 GTGGTCGCGCGCAAAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGAC 2411552 ||| |||| || || ||||| || ||||| || || ||||| | || || Sbjct 73055 TACGTCCTTTGCAAGTGCGAAAATCTTACGTTGGTCTACACCACCGAACTGAACATCCAC 73114 Query 2411553 GTCGAGGTGCTGCTCGTCGAGGGCCTGCATGAGCGGGTAGACGAG 2411597 || |||| |||||||||||||||||||||||| ||||||| ||| Sbjct 73115 ATCAAGGTACTGCTCGTCGAGGGCCTGCATGAGGGGGTAGATGAG 73159 >seq329 Length=59097 Score = 86.0 bits (94), Expect = 1e-10 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||||||||||||||| ||||| || ||||||||| |||| ||||| || ||| Sbjct 57298 GTACTTGGTGACGGCCTTGGTGCCCTCAGACACGGCGTGCTTGGCAAGTTCACCAGGCAG 57357 Query 1485531 GATCAGGCGCAC 1485542 ||||||||| || Sbjct 57358 GATCAGGCGGAC 57369 >seq182 Length=11814 Score = 86.0 bits (94), Expect = 1e-10 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||||||||||||||| ||||| || ||||||||| |||| ||||| || ||| Sbjct 10479 GTACTTGGTGACGGCCTTGGTGCCCTCAGACACGGCGTGCTTGGCAAGTTCACCAGGCAG 10420 Query 1485531 GATCAGGCGCAC 1485542 ||||||||| || Sbjct 10419 GATCAGGCGGAC 10408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916206615914186