Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01-
12] 374 sequences; 33,379,470 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq290 107 1e-18
seq143 98.7 6e-16
seq273 93.3 3e-14
>seq290
Length=256071
Score = 107 bits (118), Expect = 1e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||||| || ||||||||| ||||| |||||||| || | || | ||
Sbjct 202906 AGCACCAAGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTACGGCCGTCT 202847
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|||| ||||| || ||||| || || || ||||||||| | || | |||||||||||
Sbjct 202846 TCCAACTGCTTACCAGCGAAAATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCT 202787
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || | |||||| |||| || ||||||
Sbjct 202786 TGGATCTTGGCCTTGACGTTGTCAATAGTATCCGAAGACTCGACCTCAAGAGTGATGGTC 202727
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| || | ||||| || |||||||||||
Sbjct 202726 TTTCCAGTCAATGTCTTGACGAAGATCTGCAT 202695
Score = 100 bits (110), Expect = 2e-16
Identities = 140/194 (72%), Gaps = 8/194 (4%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||||||| | |||| ||||| |||||||| ||||| || ||| |||| | ||
Sbjct 202395 AGGACCAGGTGGAGGGTGGATTCCTTTTGAATGTTGTAGTCGGACAGGGTGCGACCGTCT 202336
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| ||||| ||||||| || ||||||||| | || | |||||||||||
Sbjct 202335 TCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCTGGGGGAATACCCTCCTTGTCC 202276
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || || ||||| || | ||||| || || |||||| || | || ||
Sbjct 202275 TGAATCTTGGTCTTGAC--AT--TGTCGATAGTGTCGGAGGACTCGACCTCGAGCGTGAT 202220
Query 34942 GGTCTTTCCCGTGA 34955
|||||| || ||||
Sbjct 202219 GGTCTTGCCGGTGA 202206
Score = 100 bits (110), Expect = 2e-16
Identities = 124/170 (73%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||||||||| ||||| || || |||| |||| || || ||||| ||||||||
Sbjct 202658 CTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 202599
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
||||| || ||||||||| | || | ||||||||||| | || ||| ||||||
Sbjct 202598 AATCAGGCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGGATCTTTGTCTTGACGTT 202539
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGA 34955
| |||| || | ||| || || | || |||||||| || ||||
Sbjct 202538 GTCGATCGTGTCGGATGACTCAACCTCGAGTGTGATGGTCTTGCCGGTGA 202489
Score = 95.1 bits (104), Expect = 8e-15
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||| | |||| ||||||||| ||||| |||||||| || | | ||||
Sbjct 203134 AGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTCCTGCCATCC 203075
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| |||||||| || || ||||| || || |||||||| | || | |||||||||||
Sbjct 203074 TCGAGTTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCC 203015
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || ||| | || | || | | || || || | || || |||
Sbjct 203014 TGGATCTTGGTCTTCACGTTGTCAATGGTATCGCTCGATTCCACCTCCAATGTGATTGTC 202955
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || |||||||| || ||||| |||||
Sbjct 202954 TTGCCGGTAAGGGTCTTCACGAAGATTTGCAT 202923
>seq143
Length=90640
Score = 98.7 bits (108), Expect = 6e-16
Identities = 93/119 (78%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||||| || ||||||||| ||||| ||||| || ||| |||| ||||
Sbjct 43115 AGGACGAGGTGAAGTGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGACCATCC 43056
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || |||||||| |||||||| || || |||||||| | || | |||||||||||
Sbjct 43055 TCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 42997
>seq273
Length=368666
Score = 93.3 bits (102), Expect = 3e-14
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||| | ||| ||||||||| ||||| ||||| || || |||| ||||
Sbjct 357122 AGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCC 357181
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||| ||||||||||| || || |||||||| | || | |||||||||||
Sbjct 357182 TCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 357240
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325691315451506
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |