Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01- 12] 374 sequences; 33,379,470 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq238 86.0 5e-11 >seq238 Length=228433 Score = 86.0 bits (94), Expect = 5e-11 Identities = 217/328 (66%), Gaps = 4/328 (1%) Strand=Plus/Minus Query 282146 TTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCA 282205 |||| ||||||||||| |||| || | |||||||||| || || || |||||| Sbjct 58173 TTATGCTTTCTCTTGAATTCTTGCACGAAGTGGTTTACAAGACGGTTGTCGAAGTCTTCA 58114 Query 282206 CCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGAC 282265 || ||||| | ||| | |||| || | | || | ||| | || ||||||| | Sbjct 58113 CCACCCAAGTGAGTGTCACCTGCGGTGGACTTGACCTCGAAGATACCCTCTTCAATGGTA 58054 Query 282266 AAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTG 282325 | || | ||||| ||| ||||| || | ||| || || || || || || Sbjct 58053 AGGAGGGAGACATCGAAGGTACCACCTCCAAGATCGAAGATGAGGACGTT--GCGCTCAC 57996 Query 282326 TCTTGG--TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTC 282383 || || || || || ||||| || |||| || ||||| || || || || || || | Sbjct 57995 CCTGGGTCTTCTTGTCGAGACCGTAGGCAATGGCGGCAGCGGTGGGCTCGTTGATGATAC 57936 Query 282384 TCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGT 282443 | || || || || || || || ||||| || ||||| || | |||||| |||| Sbjct 57935 GGAGGACGTTGAGGCCGGCGATGAGACCAGCATCCTTGGTGGCCTGACGTTGTGAGTCGT 57876 Query 282444 TAAAATATGCAGGAACAGTAATAACGGC 282471 | || || || || ||||| | ||||| Sbjct 57875 TGAAGTAGGCTGGGACAGTGACGACGGC 57848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740612038180524