Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01-
12] 374 sequences; 33,379,470 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq154 167 3e-35
seq208 136 6e-26
seq188 118 2e-20
>seq154
Length=40832
Score = 167 bits (184), Expect = 3e-35
Identities = 213/288 (74%), Gaps = 14/288 (5%)
Strand=Plus/Plus
Query 1455779 TGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGG 1455838
||| |||||||| || ||||||||||| || || ||||||||||||||| | || |||
Sbjct 12892 TGGCAAATGTAC-AAGAAGGCCGAGGC-TCTTTCTGGACCGCCGAGGAGATTGATCTCTC 12949
Query 1455839 CGCCGA----CACGGTCCACTGGGTGTCGC---TGAGCGACGACGAGCGCCATTTCATCA 1455891
| || |||| ||||| || ||| ||||||||||||| |||||||
Sbjct 12950 CAAGGATCTTCACG----ACTGGAACAAGCGCCTGAACGACGACGAGCGCTTTTTCATCT 13005
Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951
|||||||||||||| ||| |||||| |||||||||||| ||||||||||| ||
Sbjct 13006 CCCACGTCCTCGCCTTCTTT-GCCGCCTCCGATGGCATCGTCAACGAGAACCTGGTCGAG 13064
Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011
|| || | || || || | || ||||| |||| || ||||| |||||||||
Sbjct 13065 CGTTTCTCCAGCGAAGTACAGATACCCGAGGCGCGTTGCTTCTACGGCTTCCAGATCATG 13124
Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTAC 1456059
|| || ||| |||||||||| || ||||| || || ||||||||||||
Sbjct 13125 ATGGAGAACGTCCACTCTGAGACTTACTCTCTGCTCATCGACACCTAC 13172
Score = 116 bits (128), Expect = 5e-20
Identities = 190/267 (71%), Gaps = 5/267 (2%)
Strand=Plus/Plus
Query 1456515 CCAAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGC 1456574
|||||| |||||| |||||| || |||| ||| ||||||| ||||||| | ||||
Sbjct 13539 CCAAGCC-ATCATCACCGAGGCTGTTCAGATTGAGCAAGAGTTCCTCAGCGACGCTCTGC 13597
Query 1456575 CGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGC 1456634
| || || ||||||||||||||| |||||||||||||||||||| | ||||||||
Sbjct 13598 CCTGTGCTCTGCTCGGCATGAACGCCA-AGCTCATGTGCCAGTACATTG-AGTTTGTCGC 13655
Query 1456635 CGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCC 1456694
|| || ||||| || | ||| | ||| |||| | ||||||| ||
Sbjct 13656 TGATCGTCTGCTGCTCGCATTGGGCAAC-ACCAAGGTTTACCACGCCACCAACCCCTTTG 13714
Query 1456695 CATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCG 1456753
| |||||| |||||||| | |||||||||||||| |||||| || || || |
Sbjct 13715 ACTTCATGGAGAACATCTCGCTTGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTG 13774
Query 1456754 AGTACGCCAAGGCCGGCGTCACCGCCA 1456780
| ||| ||||| || |||| ||||
Sbjct 13775 ACTACCAGAAGGCTGGTGTCATGGCCA 13801
>seq208
Length=240788
Score = 136 bits (150), Expect = 6e-26
Identities = 319/479 (67%), Gaps = 2/479 (0%)
Strand=Plus/Minus
Query 332852 TGGGCGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATG 332911
|||||||| || || || || | ||||||||||| || | |||||| | |||||||
Sbjct 99583 TGGGCGTCTGTAAGACGGGCATATCGCAGGATGGCGCATCTCGACTGCAGCGGCTCGATG 99524
Query 332912 ACCATTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATG 332971
| | | ||| ||||| || | || || ||||| || | | | |||||||
Sbjct 99523 ATCTTGTTGGACTGATTGCACGCAAAAGCGAAGCGCGTGGTGGAGCTGTAGATTTCCATA 99464
Query 332972 GTCGACCGGAGGGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATG 333031
||| || ||| |||||||| || | ||| | || ||| ||||| ||||| |||| |
Sbjct 99463 GTCCTCCTGAGCGCCTGTTGCGCACCGCTCGTCATGCTGTCCGCCTCATCGAGAATGACG 99404
Query 333032 ATCTTGTGGC-GCCCGTGCGGCAGATCAACCCTTTTCGAGGCGTGGTGTTTGATGATCTT 333090
| ||| || | ||||| | |||| |||| | ||| || ||||||| ||
Sbjct 99403 AGCTTTTGTCTGCCCG-GGGGCAATGTAACCTTCTTCTGTGCAAACCCTTTGATGCGATT 99345
Query 333091 GCGCACGACGTCCACGCCGCGCTCGTCCGACGCGTTGAGTTCGAGCACGGCCTCGTCGGC 333150
||| |||||||| | || |||||||| || || ||||| ||||| ||||| || | |
Sbjct 99344 GCGGACGACGTCAATACCACGCTCGTCGGAGGCATTGAGCTCGAGAACGGCTTCTTTGTA 99285
Query 333151 GGCCGCACCCAAGAGGACGCGCGCCAGGCACGCGATGCTCGTGGTCTTGCCCGTGCCGGG 333210
||| | || | ||| ||| || |||||| |||| ||| ||||| || | || ||
Sbjct 99284 GGCATCGCCGAGGAGTTGGCGGGCGAGGCACAGGATGGACGTTGTCTTTCCGATACCTGG 99225
Query 333211 CGGACCCGCCAGCAAGAGGTTGGGCATGTTGCCGTCGGCGGCCAGCGCCTTGAGGTAGGC 333270
| || | | | | || ||||||||||| || ||| | ||||||| |
Sbjct 99224 CATGCCGGAGATGATCATGTGTGGCATGTTGCCATCTTTGGCGATGATCTTGAGGCGTTC 99165
Query 333271 AACGGCGTGCTCGTTGCCGACAATGTCGTCGAGCACCATTGGGCGGTACTTTTCGATCC 333329
|| || | ||||||||| | |||||||| | || ||||||||||||| ||
Sbjct 99164 AATGGTTTCAGTGTTGCCGACGACATCGTCGAGGTAGACGGGACGGTACTTTTCGACCC 99106
>seq188
Length=237477
Score = 118 bits (130), Expect = 2e-20
Identities = 181/258 (70%), Gaps = 0/258 (0%)
Strand=Plus/Plus
Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984
|| ||||| || |||||||| || || ||| |||| || || ||||| || | |||
Sbjct 167250 CCGACGCTGTTCAATGCCGGTACTCCATCCCCTCAGATGTCCTCCTGCTTCCTTATCGAC 167309
Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044
||||| | ||| || || |||||||| ||||| |||||| ||| || | ||||||
Sbjct 167310 ATGAAAGAGGATAGCATTGACGGCATCTACGACACTCTCAAGACGTGTGCCTTGATCTCC 167369
Query 260045 AAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTG 260104
||| | || ||||| || ||| | || ||| | || ||| | ||| | ||| |
Sbjct 167370 AAGACCGCTGGCGGTATTGGTCTCAACGTGCACCGAATCCGTGCCACCGGCTCATACATT 167429
Query 260105 GCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACG 260164
| ||||||||||| || ||||| ||| | || ||||| || || | || ||||
Sbjct 167430 GGCGGCACCAACGGAACATCAAACGGTCTTATCCCTATGCTCCGTGTATACAATAACACT 167489
Query 260165 GCGCGCTACGTCGACCAG 260182
|| || ||||||||||||
Sbjct 167490 GCTCGTTACGTCGACCAG 167507
Score = 109 bits (120), Expect = 8e-18
Identities = 298/453 (66%), Gaps = 22/453 (5%)
Strand=Plus/Plus
Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847
|| ||| |||||| || ||||||||| |||||| || || |||||||| ||| ||
Sbjct 167508 GGTGGCAACAAGCGTCCAGGTGCCTTTGCCATCTACCTCGAGCCATGGCACGCTGACATC 167567
Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907
| || || |||||| |||||||||||||||| |||| || ||| ||
Sbjct 167568 TTTGGCTTCCTCGACCTCCGCAAGAACCACGGCAAGGA----GGAGGTTCG--CGCCCGT 167621
Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATG---GTGACCGGC 261964
|||||||| |||| ||||||| ||| ||||| ||| || | | || ||||
Sbjct 167622 GATCTCTTCTACGCTCTGTGGATTCCCGATCTGTTCATGAAGCGTGTCCAAGAGAACGGC 167681
Query 261965 CGCGACTGGTCGCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCG 262024
|| ||| | ||| | ||||| |||| || |||||| || ||| |||| |
Sbjct 167682 ---GAGTGGACTCTCATGTGCCCCAACGAGTGCCCTGGCCTGGCTGATGTCTACGGCGAG 167738
Query 262025 GCCTTTGACGCCCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNCGCG---GACCGTCGTG 262081
| ||||| || || || ||| || ||| ||| |
Sbjct 167739 GAGTTTGAGGCGCTGTACGAGAGCTACGAGAAGCAGAACAAGGGCCGTGAGACTGTCC-G 167797
Query 262082 CCCGCACGACAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTAC 262141
| | || || || | |||| |||||| ||| |||||| | |||||| || | |||| |
Sbjct 167798 CGCCCA-GA-AGCTGTGGTATGCCATTCTCGAGGCCCAGACCGAGACTGGTAATCCCTTC 167855
Query 262142 ATGGTCTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA--CGA 262199
||| |||||||||| || ||||| | ||||||||| |||||||||| |||| ||
Sbjct 167856 ATGCTCTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTGGGTACCATTCG- 167914
Query 262200 CAGAGGCCAACCTGTGCACCGAGATCGTCCAGT 262232
||| ||||||||||||| || || || |||
Sbjct 167915 CAGCT-CCAACCTGTGCACGGAAATTATCGAGT 167946
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177775127012588
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |