Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01- 12] 374 sequences; 33,379,470 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq154 167 3e-35 seq208 136 6e-26 seq188 118 2e-20 >seq154 Length=40832 Score = 167 bits (184), Expect = 3e-35 Identities = 213/288 (74%), Gaps = 14/288 (5%) Strand=Plus/Plus Query 1455779 TGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGG 1455838 ||| |||||||| || ||||||||||| || || ||||||||||||||| | || ||| Sbjct 12892 TGGCAAATGTAC-AAGAAGGCCGAGGC-TCTTTCTGGACCGCCGAGGAGATTGATCTCTC 12949 Query 1455839 CGCCGA----CACGGTCCACTGGGTGTCGC---TGAGCGACGACGAGCGCCATTTCATCA 1455891 | || |||| ||||| || ||| ||||||||||||| ||||||| Sbjct 12950 CAAGGATCTTCACG----ACTGGAACAAGCGCCTGAACGACGACGAGCGCTTTTTCATCT 13005 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 |||||||||||||| ||| |||||| |||||||||||| ||||||||||| || Sbjct 13006 CCCACGTCCTCGCCTTCTTT-GCCGCCTCCGATGGCATCGTCAACGAGAACCTGGTCGAG 13064 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 || || | || || || | || ||||| |||| || ||||| ||||||||| Sbjct 13065 CGTTTCTCCAGCGAAGTACAGATACCCGAGGCGCGTTGCTTCTACGGCTTCCAGATCATG 13124 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTAC 1456059 || || ||| |||||||||| || ||||| || || |||||||||||| Sbjct 13125 ATGGAGAACGTCCACTCTGAGACTTACTCTCTGCTCATCGACACCTAC 13172 Score = 116 bits (128), Expect = 5e-20 Identities = 190/267 (71%), Gaps = 5/267 (2%) Strand=Plus/Plus Query 1456515 CCAAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGC 1456574 |||||| |||||| |||||| || |||| ||| ||||||| ||||||| | |||| Sbjct 13539 CCAAGCC-ATCATCACCGAGGCTGTTCAGATTGAGCAAGAGTTCCTCAGCGACGCTCTGC 13597 Query 1456575 CGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGC 1456634 | || || ||||||||||||||| |||||||||||||||||||| | |||||||| Sbjct 13598 CCTGTGCTCTGCTCGGCATGAACGCCA-AGCTCATGTGCCAGTACATTG-AGTTTGTCGC 13655 Query 1456635 CGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCC 1456694 || || ||||| || | ||| | ||| |||| | ||||||| || Sbjct 13656 TGATCGTCTGCTGCTCGCATTGGGCAAC-ACCAAGGTTTACCACGCCACCAACCCCTTTG 13714 Query 1456695 CATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCG 1456753 | |||||| |||||||| | |||||||||||||| |||||| || || || | Sbjct 13715 ACTTCATGGAGAACATCTCGCTTGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTG 13774 Query 1456754 AGTACGCCAAGGCCGGCGTCACCGCCA 1456780 | ||| ||||| || |||| |||| Sbjct 13775 ACTACCAGAAGGCTGGTGTCATGGCCA 13801 >seq208 Length=240788 Score = 136 bits (150), Expect = 6e-26 Identities = 319/479 (67%), Gaps = 2/479 (0%) Strand=Plus/Minus Query 332852 TGGGCGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATG 332911 |||||||| || || || || | ||||||||||| || | |||||| | ||||||| Sbjct 99583 TGGGCGTCTGTAAGACGGGCATATCGCAGGATGGCGCATCTCGACTGCAGCGGCTCGATG 99524 Query 332912 ACCATTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATG 332971 | | | ||| ||||| || | || || ||||| || | | | ||||||| Sbjct 99523 ATCTTGTTGGACTGATTGCACGCAAAAGCGAAGCGCGTGGTGGAGCTGTAGATTTCCATA 99464 Query 332972 GTCGACCGGAGGGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATG 333031 ||| || ||| |||||||| || | ||| | || ||| ||||| ||||| |||| | Sbjct 99463 GTCCTCCTGAGCGCCTGTTGCGCACCGCTCGTCATGCTGTCCGCCTCATCGAGAATGACG 99404 Query 333032 ATCTTGTGGC-GCCCGTGCGGCAGATCAACCCTTTTCGAGGCGTGGTGTTTGATGATCTT 333090 | ||| || | ||||| | |||| |||| | ||| || ||||||| || Sbjct 99403 AGCTTTTGTCTGCCCG-GGGGCAATGTAACCTTCTTCTGTGCAAACCCTTTGATGCGATT 99345 Query 333091 GCGCACGACGTCCACGCCGCGCTCGTCCGACGCGTTGAGTTCGAGCACGGCCTCGTCGGC 333150 ||| |||||||| | || |||||||| || || ||||| ||||| ||||| || | | Sbjct 99344 GCGGACGACGTCAATACCACGCTCGTCGGAGGCATTGAGCTCGAGAACGGCTTCTTTGTA 99285 Query 333151 GGCCGCACCCAAGAGGACGCGCGCCAGGCACGCGATGCTCGTGGTCTTGCCCGTGCCGGG 333210 ||| | || | ||| ||| || |||||| |||| ||| ||||| || | || || Sbjct 99284 GGCATCGCCGAGGAGTTGGCGGGCGAGGCACAGGATGGACGTTGTCTTTCCGATACCTGG 99225 Query 333211 CGGACCCGCCAGCAAGAGGTTGGGCATGTTGCCGTCGGCGGCCAGCGCCTTGAGGTAGGC 333270 | || | | | | || ||||||||||| || ||| | ||||||| | Sbjct 99224 CATGCCGGAGATGATCATGTGTGGCATGTTGCCATCTTTGGCGATGATCTTGAGGCGTTC 99165 Query 333271 AACGGCGTGCTCGTTGCCGACAATGTCGTCGAGCACCATTGGGCGGTACTTTTCGATCC 333329 || || | ||||||||| | |||||||| | || ||||||||||||| || Sbjct 99164 AATGGTTTCAGTGTTGCCGACGACATCGTCGAGGTAGACGGGACGGTACTTTTCGACCC 99106 >seq188 Length=237477 Score = 118 bits (130), Expect = 2e-20 Identities = 181/258 (70%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984 || ||||| || |||||||| || || ||| |||| || || ||||| || | ||| Sbjct 167250 CCGACGCTGTTCAATGCCGGTACTCCATCCCCTCAGATGTCCTCCTGCTTCCTTATCGAC 167309 Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044 ||||| | ||| || || |||||||| ||||| |||||| ||| || | |||||| Sbjct 167310 ATGAAAGAGGATAGCATTGACGGCATCTACGACACTCTCAAGACGTGTGCCTTGATCTCC 167369 Query 260045 AAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTG 260104 ||| | || ||||| || ||| | || ||| | || ||| | ||| | ||| | Sbjct 167370 AAGACCGCTGGCGGTATTGGTCTCAACGTGCACCGAATCCGTGCCACCGGCTCATACATT 167429 Query 260105 GCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACG 260164 | ||||||||||| || ||||| ||| | || ||||| || || | || |||| Sbjct 167430 GGCGGCACCAACGGAACATCAAACGGTCTTATCCCTATGCTCCGTGTATACAATAACACT 167489 Query 260165 GCGCGCTACGTCGACCAG 260182 || || |||||||||||| Sbjct 167490 GCTCGTTACGTCGACCAG 167507 Score = 109 bits (120), Expect = 8e-18 Identities = 298/453 (66%), Gaps = 22/453 (5%) Strand=Plus/Plus Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847 || ||| |||||| || ||||||||| |||||| || || |||||||| ||| || Sbjct 167508 GGTGGCAACAAGCGTCCAGGTGCCTTTGCCATCTACCTCGAGCCATGGCACGCTGACATC 167567 Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907 | || || |||||| |||||||||||||||| |||| || ||| || Sbjct 167568 TTTGGCTTCCTCGACCTCCGCAAGAACCACGGCAAGGA----GGAGGTTCG--CGCCCGT 167621 Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATG---GTGACCGGC 261964 |||||||| |||| ||||||| ||| ||||| ||| || | | || |||| Sbjct 167622 GATCTCTTCTACGCTCTGTGGATTCCCGATCTGTTCATGAAGCGTGTCCAAGAGAACGGC 167681 Query 261965 CGCGACTGGTCGCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCG 262024 || ||| | ||| | ||||| |||| || |||||| || ||| |||| | Sbjct 167682 ---GAGTGGACTCTCATGTGCCCCAACGAGTGCCCTGGCCTGGCTGATGTCTACGGCGAG 167738 Query 262025 GCCTTTGACGCCCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNCGCG---GACCGTCGTG 262081 | ||||| || || || ||| || ||| ||| | Sbjct 167739 GAGTTTGAGGCGCTGTACGAGAGCTACGAGAAGCAGAACAAGGGCCGTGAGACTGTCC-G 167797 Query 262082 CCCGCACGACAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTAC 262141 | | || || || | |||| |||||| ||| |||||| | |||||| || | |||| | Sbjct 167798 CGCCCA-GA-AGCTGTGGTATGCCATTCTCGAGGCCCAGACCGAGACTGGTAATCCCTTC 167855 Query 262142 ATGGTCTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA--CGA 262199 ||| |||||||||| || ||||| | ||||||||| |||||||||| |||| || Sbjct 167856 ATGCTCTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTGGGTACCATTCG- 167914 Query 262200 CAGAGGCCAACCTGTGCACCGAGATCGTCCAGT 262232 ||| ||||||||||||| || || || ||| Sbjct 167915 CAGCT-CCAACCTGTGCACGGAAATTATCGAGT 167946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177775127012588