Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01-
12] 374 sequences; 33,379,470 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq290 113 4e-20
seq143 82.4 7e-11
>seq290
Length=256071
Score = 113 bits (124), Expect = 4e-20
Identities = 153/211 (73%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586
|||||| || | || |||||| || |||||||| || | | || | | || ||
Sbjct 203132 CACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTCCTGCCATCCTC 203073
Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646
|| |||||||| ||||| || | ||||||||||||| ||| | | ||||||||||
Sbjct 203072 GAGTTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTG 203013
Query 35647 GATCTTTTGCTTCAGAGTTGCCACCG-TGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705
|||||| ||||| |||| || | | ||||||||||||||||||| ||||| || |
Sbjct 203012 GATCTTGGTCTTCAC-GTTGTCAATGGTATCGCTCGATTCCACCTCCAATGTGATTGTCT 202954
Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
| || || | || ||||| || || |||||
Sbjct 202953 TGCCGGTAAGGGTCTTCACGAAGATTTGCAT 202923
Score = 107 bits (118), Expect = 2e-18
Identities = 124/167 (74%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||||||||||||||| |||| || ||| || |||| || |||||||| || |||||
Sbjct 202374 TCCTTTTGAATGTTGTAGTCGGACAGGGTGCGACCGTCTTCAAGCTGCTTGCCGGCAAAG 202315
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
||||| ||||||||||| | |||| | |||||||||| ||||| ||| | | |
Sbjct 202314 ATCAAGCGCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGAATCTTGGTCTTGACATTG 202255
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712
| | |||||| || || ||||| | |||||| || || || ||
Sbjct 202254 TCGATAGTGTCGGAGGACTCGACCTCGAGCGTGATGGTCTTGCCGGT 202208
Score = 104 bits (114), Expect = 2e-17
Identities = 126/169 (75%), Gaps = 2/169 (1%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| ||||||||||| |||| || || || | || || |||||||| || || ||
Sbjct 202658 CTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 202599
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| ||||||||||| | ||||| || |||||||||| ||||||| ||| | ||
Sbjct 202598 AATCAGGCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGGATCTTTGTCTTGA-CGT 202540
Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712
|| | | ||||||| || || ||||| | ||||| || || || ||
Sbjct 202539 TGTCGATCGTGTCGGATGACTCAACCTCGAGTGTGATGGTCTTGCCGGT 202491
Score = 89.7 bits (98), Expect = 5e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | | |||||| || | || |||||| || |||||||| || |
Sbjct 202921 CCACCACGCAGACGGAGCACCAAGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCCGAG 202862
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || |||| |||| ||||||||| || || || | ||||||||||| | ||
Sbjct 202861 AGAGTACGGCCGTCTTCCAACTGCTTACCAGCGAAAATGAGACGCTGCTGGTCTGGGGGG 202802
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688
| || ||||||||| |||||| ||| | |||| | | || || || || ||
Sbjct 202801 ATGCCCTCCTTGTCTTGGATCTTGGCCTTGA-CGTTGTCAATAGTATCCGAAGACTCGAC 202743
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||| | ||||| || || || ||||| || || || || ||||||||
Sbjct 202742 CTCAAGAGTGATGGTCTTTCCAGTCAATGTCTTGACGAAGATCTGCAT 202695
>seq143
Length=90640
Score = 82.4 bits (90), Expect = 7e-11
Identities = 83/108 (77%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| |||| | ||| || | || || |||||||| || || ||
Sbjct 43095 CTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGACCATCCTCGAGCTGCTTTCCAGCGAA 43036
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTT 35652
|| | ||||||||||||| |||| || |||||||||| ||||||
Sbjct 43035 GATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTT 42988
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450791492539920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |