Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01- 12] 374 sequences; 33,379,470 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq188 147 3e-30 seq154 91.5 2e-13 >seq188 Length=237477 Score = 147 bits (162), Expect = 3e-30 Identities = 709/1106 (64%), Gaps = 31/1106 (3%) Strand=Plus/Minus Query 69352 ATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAAC 69411 || || ||||| || | ||| || ||||| ||| || || |||||||| || || || Sbjct 167911 ATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTAGAGCATGAAG 167852 Query 69412 GGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAAC------GACCCTAGCA 69465 ||| ||||||| || |||| | |||| ||| | | ||| | | | | || Sbjct 167851 GGATTACCAGTCTCGGTCTGGGCCTCGAGAATGGCATACCACAGCTTCTGGGCGCGGACA 167792 Query 69466 TTTATTACGGTC-TTGTAACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTC 69524 | | |||| | |||| ||||||| | | | ||| | ||| || || || Sbjct 167791 GTC-TCACGGCCCTTGTTCTGCTTCTCGT----AGCTCTCGTACAGCGCC--TCAAACTC 167739 Query 69525 ATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATC 69584 || || | |||||| ||| ||||| || || || || ||||| | | |||| | | Sbjct 167738 CTCGCCGTAGACATCAGCCAGGCCAGGGCACTCGTTGGGGCACATGAGAGTCCACTCGCC 167679 Query 69585 ATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCT 69644 | || | || || ||||| || |||||||||||||| ||||| |||||||| | Sbjct 167678 GTTCTCTTGGACACGCTTCATGAACAGATCGGGAATCCACAGAGCGTAGAAGAGATCACG 167619 Query 69645 GGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGA 69704 || | | || || || || || || || ||||| || | | || |||| Sbjct 167618 GGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAAGCCAAAGATGTCAGC 167559 Query 69705 ATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTAT 69764 |||||||| || || || || || | | | || || || || || || ||||| || | Sbjct 167558 GTGCCATGGCTCGAGGTAGATGGCAAAGGCACCTGGACGCTTGTTGCCACCCTGGTCGAC 167499 Query 69765 GTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATT 69824 ||| | ||||||||||| || || | ||||| || |||| ||| || ||| | || || Sbjct 167498 GTAACGAGCAGTGTTATTGTATACACGGAGCATAGGGATAAGACCGTTTGATGTTCCGTT 167439 Query 69825 TGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT-AGACCTATTCCTC 69883 || || ||| || || | || || || | | | | ||||| || || | Sbjct 167438 GGTGCCGCCAATGTATGAGCCGGTGGCACGGAT-TCGGTGCACGTTGAGACCAATACCGC 167380 Query 69884 CTGCCATTTTAGAGATTAGAGCACAACGT-TTCAATGTGTCATATATACCCTCTATGCTA 69942 | || | || ||||| | |||| |||| || | ||||| || || || || |||||| Sbjct 167379 CAGCGGTCTTGGAGATCAAGGCAC-ACGTCTTGAGAGTGTCGTAGATGCCGTCAATGCTA 167321 Query 69943 TCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTA 70002 || ||| |||||| | ||| || ||| ||||| ||| | | ||| || ||||| Sbjct 167320 TCCTCTTTCATGTCGATAAGGAAGCAGGAGGACATCTGAGGGGATGGAGTACCGGCATTG 167261 Query 70003 AATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGA-AAGCAGATTGTATGTTTCAAT 70061 || | || || || ||||| ||||| |||||| || | | || | || || ||||| Sbjct 167260 AACAGCGTCGGTGAGGCGTGTGTGAAGTATTTTTGTGACATGTAG-TCATAGGTCTCAAT 167202 Query 70062 AGCTGATTCTATATCC-CACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAG 70120 || || || ||| | | | || || || | || |||||||| | ||| ||||| | Sbjct 167201 GGCCTTCTCAATGTCCTCGCCG-TGGATACCGACAGCAACACGCATGAGCATGTGCTGTG 167143 Query 70121 GTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACC 70180 | || || | || || ||| | |||||||| || || || || || | Sbjct 167142 GGCGCTCGGCAACCTTGCCATCTATGCGGAGGAGGTATGAGCGCTCAAGTGTCTTGAAGC 167083 Query 70181 CAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTAT---CCT 70237 ||||| | | ||| ||||||| || || | ||| | || || || | || | | Sbjct 167082 CAAAA-ATTGGTAGTTGAAGTCTCGGTCATATACTATAGCCGAGTTGAGCTCATCTGCGT 167024 Query 70238 TATATTTGGTAACTATATCCATAACAGTAGGTGAGATAATCGGAGATCGTTTACCATTTT 70297 || | | | | | | || | ||| | ||||| || || | || ||||| | Sbjct 167023 GATCCTGGATGATCTTGTACA-CAGAGTCG--GAGATCATGGGCTGGTGCTTGCCATTCT 166967 Query 70298 TAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCT 70357 | || || || |||||| | | ||| || || || ||| | || || || | || Sbjct 166966 TGGGGTTGACGTAGTTGTAGAGATCCGACACAACTGCAGAGAATTGCTTCTTCGTCTGCT 166907 Query 70358 TGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAG 70417 |||| | |||||| | ||| || | |||||||| || || || || ||||| |||| | Sbjct 166906 TGTGAAGATTTGAGACGGCGATACGTGCTGCTAGGATGGCGTAATCGGGATG-TGTGGTG 166848 Query 70418 TACAAGTA-GCTGCTATTTCCGCAGC 70442 || ||| |||||| | || || || Sbjct 166847 GTCATGTAGGCTGCTGTCTCGGCGGC 166822 >seq154 Length=40832 Score = 91.5 bits (100), Expect = 2e-13 Identities = 110/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 ||||||||||||| || | ||||||||| | | || | ||||| || || || || Sbjct 13494 GCAGGCGAAGTCAGTGTGCATGCCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTAAG 13435 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735 ||||||||||| |||||||| || | ||| || |||| || || || || |||||| Sbjct 13434 GCCAGGCATTAGGCCACGCTTCTTCAACCAGAAGATGGATGCGAACGAACCGCTAAAGAA 13375 Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAG 39765 ||| || || || || || || || ||||| Sbjct 13374 GATACCCTCAACAGCAGCGAACGCGACAAG 13345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686905588701360