Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01-
12] 374 sequences; 33,379,470 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq188 147 3e-30
seq154 91.5 2e-13
>seq188
Length=237477
Score = 147 bits (162), Expect = 3e-30
Identities = 709/1106 (64%), Gaps = 31/1106 (3%)
Strand=Plus/Minus
Query 69352 ATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAAC 69411
|| || ||||| || | ||| || ||||| ||| || || |||||||| || || ||
Sbjct 167911 ATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTAGAGCATGAAG 167852
Query 69412 GGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAAC------GACCCTAGCA 69465
||| ||||||| || |||| | |||| ||| | | ||| | | | | ||
Sbjct 167851 GGATTACCAGTCTCGGTCTGGGCCTCGAGAATGGCATACCACAGCTTCTGGGCGCGGACA 167792
Query 69466 TTTATTACGGTC-TTGTAACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTC 69524
| | |||| | |||| ||||||| | | | ||| | ||| || || ||
Sbjct 167791 GTC-TCACGGCCCTTGTTCTGCTTCTCGT----AGCTCTCGTACAGCGCC--TCAAACTC 167739
Query 69525 ATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATC 69584
|| || | |||||| ||| ||||| || || || || ||||| | | |||| | |
Sbjct 167738 CTCGCCGTAGACATCAGCCAGGCCAGGGCACTCGTTGGGGCACATGAGAGTCCACTCGCC 167679
Query 69585 ATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCT 69644
| || | || || ||||| || |||||||||||||| ||||| |||||||| |
Sbjct 167678 GTTCTCTTGGACACGCTTCATGAACAGATCGGGAATCCACAGAGCGTAGAAGAGATCACG 167619
Query 69645 GGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGA 69704
|| | | || || || || || || || ||||| || | | || ||||
Sbjct 167618 GGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAAGCCAAAGATGTCAGC 167559
Query 69705 ATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTAT 69764
|||||||| || || || || || | | | || || || || || || ||||| || |
Sbjct 167558 GTGCCATGGCTCGAGGTAGATGGCAAAGGCACCTGGACGCTTGTTGCCACCCTGGTCGAC 167499
Query 69765 GTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATT 69824
||| | ||||||||||| || || | ||||| || |||| ||| || ||| | || ||
Sbjct 167498 GTAACGAGCAGTGTTATTGTATACACGGAGCATAGGGATAAGACCGTTTGATGTTCCGTT 167439
Query 69825 TGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT-AGACCTATTCCTC 69883
|| || ||| || || | || || || | | | | ||||| || || |
Sbjct 167438 GGTGCCGCCAATGTATGAGCCGGTGGCACGGAT-TCGGTGCACGTTGAGACCAATACCGC 167380
Query 69884 CTGCCATTTTAGAGATTAGAGCACAACGT-TTCAATGTGTCATATATACCCTCTATGCTA 69942
| || | || ||||| | |||| |||| || | ||||| || || || || ||||||
Sbjct 167379 CAGCGGTCTTGGAGATCAAGGCAC-ACGTCTTGAGAGTGTCGTAGATGCCGTCAATGCTA 167321
Query 69943 TCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTA 70002
|| ||| |||||| | ||| || ||| ||||| ||| | | ||| || |||||
Sbjct 167320 TCCTCTTTCATGTCGATAAGGAAGCAGGAGGACATCTGAGGGGATGGAGTACCGGCATTG 167261
Query 70003 AATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGA-AAGCAGATTGTATGTTTCAAT 70061
|| | || || || ||||| ||||| |||||| || | | || | || || |||||
Sbjct 167260 AACAGCGTCGGTGAGGCGTGTGTGAAGTATTTTTGTGACATGTAG-TCATAGGTCTCAAT 167202
Query 70062 AGCTGATTCTATATCC-CACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAG 70120
|| || || ||| | | | || || || | || |||||||| | ||| ||||| |
Sbjct 167201 GGCCTTCTCAATGTCCTCGCCG-TGGATACCGACAGCAACACGCATGAGCATGTGCTGTG 167143
Query 70121 GTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACC 70180
| || || | || || ||| | |||||||| || || || || || |
Sbjct 167142 GGCGCTCGGCAACCTTGCCATCTATGCGGAGGAGGTATGAGCGCTCAAGTGTCTTGAAGC 167083
Query 70181 CAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTAT---CCT 70237
||||| | | ||| ||||||| || || | ||| | || || || | || | |
Sbjct 167082 CAAAA-ATTGGTAGTTGAAGTCTCGGTCATATACTATAGCCGAGTTGAGCTCATCTGCGT 167024
Query 70238 TATATTTGGTAACTATATCCATAACAGTAGGTGAGATAATCGGAGATCGTTTACCATTTT 70297
|| | | | | | | || | ||| | ||||| || || | || ||||| |
Sbjct 167023 GATCCTGGATGATCTTGTACA-CAGAGTCG--GAGATCATGGGCTGGTGCTTGCCATTCT 166967
Query 70298 TAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCT 70357
| || || || |||||| | | ||| || || || ||| | || || || | ||
Sbjct 166966 TGGGGTTGACGTAGTTGTAGAGATCCGACACAACTGCAGAGAATTGCTTCTTCGTCTGCT 166907
Query 70358 TGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAG 70417
|||| | |||||| | ||| || | |||||||| || || || || ||||| |||| |
Sbjct 166906 TGTGAAGATTTGAGACGGCGATACGTGCTGCTAGGATGGCGTAATCGGGATG-TGTGGTG 166848
Query 70418 TACAAGTA-GCTGCTATTTCCGCAGC 70442
|| ||| |||||| | || || ||
Sbjct 166847 GTCATGTAGGCTGCTGTCTCGGCGGC 166822
>seq154
Length=40832
Score = 91.5 bits (100), Expect = 2e-13
Identities = 110/150 (73%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675
||||||||||||| || | ||||||||| | | || | ||||| || || || ||
Sbjct 13494 GCAGGCGAAGTCAGTGTGCATGCCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTAAG 13435
Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735
||||||||||| |||||||| || | ||| || |||| || || || || ||||||
Sbjct 13434 GCCAGGCATTAGGCCACGCTTCTTCAACCAGAAGATGGATGCGAACGAACCGCTAAAGAA 13375
Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAG 39765
||| || || || || || || || |||||
Sbjct 13374 GATACCCTCAACAGCAGCGAACGCGACAAG 13345
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686905588701360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |