Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01- 12] 374 sequences; 33,379,470 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq188 309 4e-79 seq154 168 8e-37 >seq188 Length=237477 Score = 309 bits (342), Expect = 4e-79 Identities = 1125/1740 (65%), Gaps = 33/1740 (2%) Strand=Plus/Minus Query 110363 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAG 110422 |||||||||||||| || |||||||| || | |||||| || | ||||| || | | Sbjct 168865 CGGAGATAGTACATGCCTGTCTTGAGACCAAGCTTCCATCCGGCAAAGTGCATGGAGGTG 168806 Query 110423 AGCTTGGACATCGTTGGACTTTCCATGAAGAGGTTCAT--ACTTTGACTTTGGTCAATGA 110480 | |||| ||| || || | |||| || ||| | ||| |||| ||||||||| Sbjct 168805 ATCTTGCCCATGGTGGGCTCCTTCATGTGGATGTTGAGTGACTGGGACT--GGTCAATGA 168748 Query 110481 AGCGCCCCCGTTGTGCCGCCATATCAATGACATCCTTCAT--CTTAATTTCCCAAACTGT 110538 || || || | || ||||| | || | | ||| | ||||||||||| || Sbjct 168747 AGGCACCACGGTCGGCAGCCATCTGGATAA--TGGTTCGCTGCGAGATTTCCCAAACAGT 168690 Query 110539 GCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGG--ATGGAACCCCCC 110596 ||||| ||||| | || || ||||||| | ||| |||| ||||| || ||| Sbjct 168689 TTTGTAGAGGGTCTTGGTCTCCTCAGGGATATTGGGGATC--CTGGCAATGGAGCCACCC 168632 Query 110597 GCCTTCACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTG 110656 | | || | | |||||| | || ||||| || || || | ||||| ||| Sbjct 168631 TCGGCGATGATACGGTTCTTCATGTTCTCAGACCACAGGCCCATATCGACAAGGTCCTTG 168572 Query 110657 ACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTT 110716 | | |||||| | |||||||| ||||| | | ||||||||| Sbjct 168571 AGCAACCATGGGTTGACGACCTGGAACTCACCCGCGAGCACACGGCGTGAGTAGATGTTG 168512 Query 110717 GTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGC 110776 | ||||| || || ||||| ||||| || || | || || | ||| ||||| |||||| Sbjct 168511 GAGGTGTAGGGCTCGAAGCACTCATTGTTTCCGAGAATCTGAGAGGTCGAGGCAGTTGGC 168452 Query 110777 ATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACA 110836 || ||||| |||| || ||| || | ||| | || ||| |||| || || Sbjct 168451 ATAGGTGCAATCAGCAGCGAGTTGCGGACACCGTGCTGAGCGATCTTGGCCTTCAGTTCA 168392 Query 110837 TCCCAGTCGTAGTTGAGC--TTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTT 110894 ||||||| || || | | || | || |||| |||||||| ||||||| | || | Sbjct 168391 GCCCAGTCCCAGA-GATCGGTGGGGGTAACGTTCC-ACATGTCATACTGAAGGATACCCT 168334 Query 110895 GGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGC 110954 | || |||| || ||||| |||| || || | ||| | | | || | || ||| Sbjct 168333 GTGAGACGGGGGATCCCTCGTAGGTCTCGTAAGGACCAAGCTCCTTGGCAATGTCGCAGG 168274 Query 110955 TCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTT 111014 | ||| | || || || ||||| || ||||| | || | || |||||| | Sbjct 168273 AGGAGGTCAGAGCAGCATGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCT 168214 Query 111015 CATCTGAATCAAATGCGTAGCGGCACAAA-ATAAATACATCCGCGAGACCTTGAACACCC 111073 | | || || |||| | || ||| | || |||| || |||||||| |||||| Sbjct 168213 CGGCCGACTCGAATG-GCAGGCGCAGTGCGAGGAAAGCATCAGCCAGACCTTGCACACCC 168155 Query 111074 AAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTT 111133 | |||||| |||| ||| || | || ||||| ||| ||||| || || Sbjct 168154 ATACCAATGGGTCGGTGGCGGAAGTTGCTGCGGCGCGCCTCCTCGACGGGGTAGTGGTTG 168095 Query 111134 CTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCA 111193 ||||||| ||| | || || |||| || |||| || || || || | Sbjct 168094 ACATCAATGATCTTGTTCAAGTTGCGAGTGACAACCTGGGTGACCTCGTGGAGCTTCTTG 168035 Query 111194 TAATCAAAAG-TGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATT 111252 | ||||| | || | || | | |||| | || ||||| | || ||||| || Sbjct 168034 AAGTCAAACTCTCCGCG-CTTGTAGTCGACAAAGGAAGGCAGGGCAAGGGAGGCCAAGTT 167976 Query 111253 GCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACT 111312 ||| ||||| ||| || | |||||||| | |||||| || || | |||||| || Sbjct 167975 GCAGACAGCGACCTCGTCAGGGGCAGTGTACTCGATAATTTCCGTGCACAGGTTGGAGCT 167916 Query 111313 CTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCAT 111372 ||| || |||| ||||| ||||| ||||| |||||| ||||||||||||||||| Sbjct 167915 GCGAATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTAGAGCAT 167856 Query 111373 GTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA-CATCGGCGGCTG 111431 | |||| | || ||||| ||||| | | |||||| || | ||| | | || | ||| Sbjct 167855 GAAGGGATTACCAGTCTCGGTCTGGGCCTCGAGAATGGCATACCACAGCTTCTG-GGCGC 167797 Query 111432 GTACAATGGCGTTGGCCCGTCC-CTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCC 111490 | ||| | | ||||| | || | |||||| | ||| || || ||||||||| Sbjct 167796 GGACAGTCTCAC-GGCCCTTGTTCTGCTTCTCGTAGCTCTCGTACAGCGCCTCAAACTCC 167738 Query 111491 TCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCA 111550 || || | || | || || || || || || || | |||| ||| | || Sbjct 167737 TCGCCGTAGACATCAGCCAGGCCAGGGCACTCGTTGGGGCACATGAGAGTCCACTCGCCG 167678 Query 111551 CCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTA 111610 || | || ||||||||||| || || ||||||||||| | | |||||||| | Sbjct 167677 TTCTCTTGGACACGCTTCATGAACAGATCGGGAATCCACAGAGCGTAGAAGAGATCACGG 167618 Query 111611 CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCG 111670 ||| |||| || | || ||||| || | || ||||| | | ||| || ||| Sbjct 167617 GCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAAGCCAAAGATGTCAGCG 167558 Query 111671 TGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTT 111724 ||||||||||| || |||| || | | || | ||||| ||| | || | Sbjct 167557 TGCCATGGCTCGAGGTAGATGGCAAAGGCACC---TGGACGCTTGTTGCCACCCTGGTCG 167501 Query 111725 ACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCA 111784 || || || || ||| || |||| || ||||| || |||| ||| | |||| || Sbjct 167500 ACGTAACGAGCAGTGTTATTGTATACACGGAGCATAGGGATAAGACCGTTTGATGTTCCG 167441 Query 111785 TTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCC 111844 || || || | ||| || |||| | | || | || | |||||||| Sbjct 167440 TTGGTGCCGCCAATGTATGAGCCGGTGGCACGGATTCGGTGCACGTTGAGACCAATACCG 167381 Query 111845 CCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAG 111904 ||||| ||| ||||| |||||| | | ||||| | ||||| |||| || Sbjct 167380 CCAGCGGTCTTGGAGATCAAGGCACACGTCTTGAGAGTGTCGTAGATGCCGTCAATGCTA 167321 Query 111905 TCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTG 111964 ||||| || || ||||||||||||| ||||||||| || ||| ||||| |||||| Sbjct 167320 TCCTCTTTCATGTCGATAAGGAAGCAGGAGGACATCTGAGGGGATGGAGTACCGGCATTG 167261 Query 111965 AAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTATGTCTCCAAG 112024 || || || |||| ||||| |||| ||| ||||| | ||| || ||||| | | Sbjct 167260 AACAGCGTCGGTGAGGCGTGTGTGAAGTATTTTTGTGACATGTAGTCATAGGTCTCAATG 167201 Query 112025 ACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGGG 112084 | |||||||| || |||||||| |||| || || ||||||| ||||| ||||||| Sbjct 167200 GCCTTCTCAATGTCCTCGCCGTGGATACCGACAGCAACACGCATGAGCATGTGCTGTGGG 167141 >seq154 Length=40832 Score = 168 bits (186), Expect = 8e-37 Identities = 311/452 (69%), Gaps = 12/452 (3%) Strand=Plus/Minus Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430 ||||| ||||| |||||||| |||||||||||||| ||| |||| ||||| ||||| Sbjct 13778 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCAAGCGAGATGTTCTCCATG 13719 Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAA--TGGGTGGCACCCCAACTTGTTTG-AGGAGA 122487 |||||||| || || | |||| ||| | |||| ||| | || | || ||| Sbjct 13718 AAGTCAAAGGGGTTGGTGGCGTGGTAAACCTTGGTGTTGCCCAA---TGCGAGCAGCAGA 13662 Query 122488 CGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGTTA 122547 ||||| | ||| |||||||||||| | |||| || | |||||| |||| || | Sbjct 13661 CGATCAGCGACAAACTCAATGTACTGGCACATGAGCTTGGCGTTCATGCCGAGCAGAGCA 13602 Query 122548 CATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCG 122607 || || || ||||| || |||| ||| |||||||| ||| ||||| | | |||||| Sbjct 13601 CAGGGCAGAGCGTCGCTGAGGAACTCTTGCTCAATCTGAACAGCCTCGGTGATGATGGCT 13542 Query 122608 TGGATAGTTTCGGTAGTGGGTC---TATTACGCAAAGTCTTGAAGAGCTCCACGGCAAAC 122664 |||| | || | |||| | | || | | || ||||||| ||| || Sbjct 13541 TGGACGGCCTCCTTGCTGGGGCGGGTGTTGAGAAGAG---AGAAGAGCAGGCAGGCGAAG 13485 Query 122665 TCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATG 122724 || ||| | |||||||| || || || || || || |||||| || || ||||| Sbjct 13484 TCAGTGTGCATGCCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTAAGGCCAGGCATT 13425 Query 122725 AGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCC 122784 || || |||||||||||||| | || | ||| || ||| |||||||||||||| Sbjct 13424 AGGCCACGCTTCTTCAACCAGAAGATGGATGCGAACGAACCGCTAAAGAAGATACCCTCA 13365 Query 122785 ACACACGCAAACGCAAAAAGGCGTTCGGCGAA 122816 ||| || ||||| | ||| || |||||| Sbjct 13364 ACAGCAGCGAACGCGACAAGACGGCTGGCGAA 13333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628029063950400