Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01-
12] 374 sequences; 33,379,470 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq290 122 3e-22
seq132 100 9e-16
seq143 93.3 1e-13
>seq290
Length=256071
Score = 122 bits (134), Expect = 3e-22
Identities = 151/207 (73%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | || || ||||| ||||||||||| || ||||| || || ||
Sbjct 202697 CATACCACCACGGAGGCGGAGGACGAGATGCAGAGTAGACTCCTTCTGAATGTTGTAGTC 202638
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | || || ||||| || || || || || || || || || || ||||| || ||
Sbjct 202637 GGACAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCTGG 202578
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|||||| || || || ||||| || || | || || || || |||| || |||| ||
Sbjct 202577 AGGAATGCCCTCCTTGTCCTGGATCTTTGTCTTGACGTTGTCGATCGTGTCGGATGACTC 202518
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGT 140713
||| || ||||| | ||||| |||||
Sbjct 202517 AACCTCGAGTGTGATGGTCTTGCCGGT 202491
Score = 118 bits (130), Expect = 3e-21
Identities = 167/235 (71%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||||||||| | | || || | |||||||| ||||| || || || || |
Sbjct 202929 TTTGCATACCACCACGCAGACGGAGCACCAAGTGAAGAGTTGACTCCTTCTGGATGTTGT 202870
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || || | || || || ||||| | || || ||||| || || ||||| ||||| |
Sbjct 202869 AGTCCGAGAGAGTACGGCCGTCTTCCAACTGCTTACCAGCGAAAATGAGACGCTGCTGGT 202810
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
| || || || || || || || || || || || || || || ||||| | ||| || |
Sbjct 202809 CTGGGGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCAATAGTATCCGAAG 202750
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || ||||| || | |||||||| || | ||| || || || ||||||||
Sbjct 202749 ACTCGACCTCAAGAGTGATGGTCTTTCCAGTCAATGTCTTGACGAAGATCTGCAT 202695
Score = 107 bits (118), Expect = 6e-18
Identities = 164/234 (70%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 140504 TTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATA 140563
|||| ||| ||||| | | || || | || || || ||||| || || || || ||
Sbjct 203156 TTACTGACCGCCACGAAGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTA 203097
Query 140564 ATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATC 140623
|| || | || | ||||| || ||||| || ||||||||||| ||||| ||||| ||
Sbjct 203096 GTCCGAGAGCGTCCTGCCATCCTCGAGTTGCTTACCAGCAAAGATGAGACGCTGCTGGTC 203037
Query 140624 AGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGG 140683
||||| || || || || ||||| || || | || || || ||||| | ||| |
Sbjct 203036 CGGAGGGATACCCTCCTTGTCCTGGATCTTGGTCTTCACGTTGTCAATGGTATCGCTCGA 202977
Query 140684 TTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||| || || | ||| | |||||| ||||| || || || || || || |||||
Sbjct 202976 TTCCACCTCCAATGTGATTGTCTTGCCGGTAAGGGTCTTCACGAAGATTTGCAT 202923
Score = 104 bits (114), Expect = 7e-17
Identities = 147/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | || || || || || || || || |||||||| || || ||
Sbjct 202414 CATACCACCACGGAGGCGGAGGACCAGGTGGAGGGTGGATTCCTTTTGAATGTTGTAGTC 202355
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | || || || |||||||| || || || |||||||| | || ||||| || ||
Sbjct 202354 GGACAGGGTGCGACCGTCTTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCTGG 202295
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
||||| || || || |||||||| || | || ||||| || || | || || | ||
Sbjct 202294 GGGAATACCCTCCTTGTCCTGAATCTTGGTCTTGACATTGTCGATAGTGTCGGAGGACTC 202235
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGT 140713
|| || || || | ||||| |||||
Sbjct 202234 GACCTCGAGCGTGATGGTCTTGCCGGT 202208
>seq132
Length=48160
Score = 100 bits (110), Expect = 9e-16
Identities = 106/139 (76%), Gaps = 3/139 (2%)
Strand=Plus/Minus
Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517
|||||||||||| | || || ||| || || | ||||||||||| ||||| || ||
Sbjct 37631 CGTGGCACACCAAGGGTGACGTTC---TTGGAAGACACACCAGCAAAATGGAAGGTGTTG 37575
Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577
|| || | || |||| |||||||||||| ||||| ||||||| || || ||||| ||
Sbjct 37574 AGCGTCATCTGCGTAGCGGGCTCACCAATGGACTGGGCTGCAAGCACACCGACCATCTCA 37515
Query 377578 CCAGGATTGACAATAGCCT 377596
|||||| |||| |||||
Sbjct 37514 CCAGGAGCGACAGCAGCCT 37496
>seq143
Length=90640
Score = 93.3 bits (102), Expect = 1e-13
Identities = 108/146 (74%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 140508 ATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 140567
||||||||||| | | || || || ||||| || ||||| || || || || || ||
Sbjct 43133 ATACCACCACGGAGACGGAGGACGAGGTGAAGTGTCGACTCCTTCTGGATGTTGTAGTCG 43074
Query 140568 GATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGA 140627
|| | || || ||||| || || || |||||||| ||||| ||||| ||||| || ||
Sbjct 43073 GAAAGGGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGG 43014
Query 140628 GGAATTCCTTCTTTATCCTGAATTTT 140653
||||| || || || ||||| || ||
Sbjct 43013 GGAATGCCCTCCTTGTCCTGGATCTT 42988
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515247139090322
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |