Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01- 12] 374 sequences; 33,379,470 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq188 289 3e-73 seq154 111 2e-19 >seq188 Length=237477 Score = 289 bits (320), Expect = 3e-73 Identities = 526/757 (69%), Gaps = 22/757 (3%) Strand=Plus/Plus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252 ||||||| || || | ||||||||||| || ||| | | | |||||| || | Sbjct 167155 TCATGCGTGTTGCTGTCGGTATCCACGGCGAGGACATTGAGAAGGCCATTGAGACCTATG 167214 Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312 ||| ||| ||||| ||||| || |||||| | || || |||||||| || ||||| Sbjct 167215 ACTACATGTCACAAAAATACTTCACACACGCCTCACCGACGCTGTTCAATGCCGGTACTC 167274 Query 53313 -ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGC 53371 ||| |||||||||||| ||||||||| | | ||||| || || || |||||| Sbjct 167275 CATC-CCCTCAGATGTCCTCCTGCTTCCTTATCGACATGAAAGAGGATAGCATTGACGGC 167333 Query 53372 ATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATC 53431 |||||||| || |||||| ||||||| ||||||||| | || ||||| ||| || Sbjct 167334 ATCTACGACACTCTCAAGACGTGTGCCTTGATCTCCAAGACCGCTGGCGGTATTGGTCTC 167393 Query 53432 CAC-TGCTC-GAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCG 53489 || ||| | ||| ||||||| | |||| || || || || ||||| | Sbjct 167394 AACGTGCACCGAA--TCCGTGCCACCGGCTCATACATTGGCGGCACCAACGGAACATCAA 167451 Query 53490 ATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTG 53549 | || | | ||||||||||| || | ||| ||||| || || |||||| ||||||||| Sbjct 167452 ACGGTCTTATCCCTATGCTCCGTGTATACAATAACACTGCTCGTTACGTCGACCAGGGTG 167511 Query 53550 GTGGGAAGCG-CAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATG 53608 | ||||| | ||| | | || ||||||||||||||||| |||||||| ||||| | Sbjct 167512 GCAACAAGCGTCCAGGTG-CCTTTGCCATCTACCTCGAGCCATGGCACGCTGACATCTTT 167570 Query 53609 GAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT- 53667 | || ||||| || || ||| || || | || ||| | ||| |||||| || || Sbjct 167571 GGCTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAGGTTCGCGCCCGTGATCTCTTC 167630 Query 53668 TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTA 53727 ||| |||||||||||||| || || |||||| | || | || ||| |||||| Sbjct 167631 TAC-GCTCTGTGGATTCCCGATCTGTTCATGAAGCGTGTCCAAGAGAACGGCGAGTGGAC 167689 Query 53728 CCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGA 53787 || |||||||| ||||||||||| ||||| | ||||||||| ||||||||| | | Sbjct 167690 TCTCATGTGCCCCAACGAGTGCCCTGGCCTGGCTGATGTCTACGGCGAGGAGTTTGAGGC 167749 Query 53788 GATGTATCGGACGTAC-----GCAGTTC-AGGGCCGCTACAAGAAGAAGGTCAAGGCGCG 53841 | |||| || ||| |||| | ||||||| ||| ||| || | Sbjct 167750 GCTGTACGAGAGCTACGAGAAGCAGAACAAGGGCCG------TGAGACTGTCCGCGCCCA 167803 Query 53842 TGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTA 53901 || | ||| |||| || ||| || |||| ||||| || | || | |||| ||| Sbjct 167804 GAAGCTGTGGTATGCCATTCTCGAGGCCCAGACCGAGACTGGTAATCCCTTCATGCTCTA 167863 Query 53902 CAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938 ||||||| | |||| |||||||||||||||||| Sbjct 167864 CAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAAC 167900 Score = 107 bits (118), Expect = 2e-18 Identities = 107/139 (77%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 55786 TGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCC 55845 ||| || |||||||| | ||| |||||||||||||| || |||||| |||| || | || Sbjct 168731 TGCCGACCGTGGTGCCTTCATTGACCAGTCCCAGTCACTCAACATCCACATGAAGGAGCC 168790 Query 55846 TTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGG 55905 | ||| |||| | | ||| ||||||||| ||| |||||| || |||||||| || Sbjct 168791 CACCATGGGCAAGATCACCTCCATGCACTTTGCCGGATGGAAGCTTGGTCTCAAGACAGG 168850 Query 55906 TATGTACTATCTGCGGACC 55924 ||||||||||| || ||| Sbjct 168851 CATGTACTATCTCCGTACC 168869 Score = 86.0 bits (94), Expect = 7e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543 |||||||| ||||| | || || |||||||| || ||||| ||||||| | || ||| Sbjct 168426 CGCAACTCGCTGCTGATTGCACCTATGCCAACTGCCTCGACCTCTCAGATTCTCGGAAAC 168485 Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603 || ||| |||||||| ||||| ||||||||||| ||||| || || |||||| Sbjct 168486 AATGAGTGCTTCGAGCCCTACACCTCCAACATCTACTCACGCCGTGTGCTCGCGGGTGAG 168545 Query 55604 TT 55605 || Sbjct 168546 TT 168547 >seq154 Length=40832 Score = 111 bits (122), Expect = 2e-19 Identities = 297/444 (67%), Gaps = 14/444 (3%) Strand=Plus/Minus Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522 || |||||||| ||||| || || ||||||||||| || | | ||||||||||||||| Sbjct 13778 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCAAGCGAGATGTTCTCCATG 13719 Query 74523 CAGTCGAAAGGGTTCTTTGCACCGTAAA--TAGGCTTCTCCCCAAACTGTGCCATGAGGC 74580 |||| || ||||| | || ||||| | || | | ||||| | || | || | Sbjct 13718 AAGTCAAAGGGGTTGGTGGCGTGGTAAACCTTGGTGT-TGCCCAATGCGAGC-AGCAGAC 13661 Query 74581 GATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAGTTTGC 74640 |||| || ||||| | ||||||||| ||| || | |||||||| || | Sbjct 13660 GATCAGCGACAAACTCAATGTACTGGCACATGAGCTTGGCGTTCATGCCGAGCAGAGCAC 13601 Query 74641 ACGGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCCCATTGGACAAT--CTT 74698 | ||||| || ||| ||| ||||| ||| | || |||| || || ||| Sbjct 13600 AGGGCAGAGCGTCGCTGAGGAACTCTTGCTCAATCTGAACAGCCTCGGTGATGATGGCTT 13541 Query 74699 GTGAATGTCT--TTGGAAGGGCACTTTTCCCTCAGGTGAGAGTAAAGC-GTCACGGCAAA 74755 | || | || ||| |||| | | | || ||||| | ||| | || ||| || Sbjct 13540 G-GACGGCCTCCTTGCTGGGGCGGGTGT---TGAGAAGAGAGAAGAGCAGGCA-GGCGAA 13486 Query 74756 CTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCAT 74815 || ||| ||| ||||| | || | || || || || | |||||||||||| Sbjct 13485 GTCAGTGTGCATGCCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTAAGGCCAGGCAT 13426 Query 74816 AAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTC 74875 || ||||||||||||||||| ||||||| ||| ||||| || |||||||| || || Sbjct 13425 TAGGCCACGCTTCTTCAACCAGAAGATGGATGCGAACGAACCGCTAAAGAAGATACCCTC 13366 Query 74876 GACACACGCAAAGGCGACAAGGCG 74899 ||| || || |||||||| || Sbjct 13365 AACAGCAGCGAACGCGACAAGACG 13342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547213441765200