Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01-
12] 374 sequences; 33,379,470 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq188 289 3e-73
seq154 111 2e-19
>seq188
Length=237477
Score = 289 bits (320), Expect = 3e-73
Identities = 526/757 (69%), Gaps = 22/757 (3%)
Strand=Plus/Plus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252
||||||| || || | ||||||||||| || ||| | | | |||||| || |
Sbjct 167155 TCATGCGTGTTGCTGTCGGTATCCACGGCGAGGACATTGAGAAGGCCATTGAGACCTATG 167214
Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312
||| ||| ||||| ||||| || |||||| | || || |||||||| || |||||
Sbjct 167215 ACTACATGTCACAAAAATACTTCACACACGCCTCACCGACGCTGTTCAATGCCGGTACTC 167274
Query 53313 -ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGC 53371
||| |||||||||||| ||||||||| | | ||||| || || || ||||||
Sbjct 167275 CATC-CCCTCAGATGTCCTCCTGCTTCCTTATCGACATGAAAGAGGATAGCATTGACGGC 167333
Query 53372 ATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATC 53431
|||||||| || |||||| ||||||| ||||||||| | || ||||| ||| ||
Sbjct 167334 ATCTACGACACTCTCAAGACGTGTGCCTTGATCTCCAAGACCGCTGGCGGTATTGGTCTC 167393
Query 53432 CAC-TGCTC-GAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCG 53489
|| ||| | ||| ||||||| | |||| || || || || ||||| |
Sbjct 167394 AACGTGCACCGAA--TCCGTGCCACCGGCTCATACATTGGCGGCACCAACGGAACATCAA 167451
Query 53490 ATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTG 53549
| || | | ||||||||||| || | ||| ||||| || || |||||| |||||||||
Sbjct 167452 ACGGTCTTATCCCTATGCTCCGTGTATACAATAACACTGCTCGTTACGTCGACCAGGGTG 167511
Query 53550 GTGGGAAGCG-CAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATG 53608
| ||||| | ||| | | || ||||||||||||||||| |||||||| ||||| |
Sbjct 167512 GCAACAAGCGTCCAGGTG-CCTTTGCCATCTACCTCGAGCCATGGCACGCTGACATCTTT 167570
Query 53609 GAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT- 53667
| || ||||| || || ||| || || | || ||| | ||| |||||| || ||
Sbjct 167571 GGCTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAGGTTCGCGCCCGTGATCTCTTC 167630
Query 53668 TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTA 53727
||| |||||||||||||| || || |||||| | || | || ||| ||||||
Sbjct 167631 TAC-GCTCTGTGGATTCCCGATCTGTTCATGAAGCGTGTCCAAGAGAACGGCGAGTGGAC 167689
Query 53728 CCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGA 53787
|| |||||||| ||||||||||| ||||| | ||||||||| ||||||||| | |
Sbjct 167690 TCTCATGTGCCCCAACGAGTGCCCTGGCCTGGCTGATGTCTACGGCGAGGAGTTTGAGGC 167749
Query 53788 GATGTATCGGACGTAC-----GCAGTTC-AGGGCCGCTACAAGAAGAAGGTCAAGGCGCG 53841
| |||| || ||| |||| | ||||||| ||| ||| || |
Sbjct 167750 GCTGTACGAGAGCTACGAGAAGCAGAACAAGGGCCG------TGAGACTGTCCGCGCCCA 167803
Query 53842 TGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTA 53901
|| | ||| |||| || ||| || |||| ||||| || | || | |||| |||
Sbjct 167804 GAAGCTGTGGTATGCCATTCTCGAGGCCCAGACCGAGACTGGTAATCCCTTCATGCTCTA 167863
Query 53902 CAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938
||||||| | |||| ||||||||||||||||||
Sbjct 167864 CAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAAC 167900
Score = 107 bits (118), Expect = 2e-18
Identities = 107/139 (77%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 55786 TGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCC 55845
||| || |||||||| | ||| |||||||||||||| || |||||| |||| || | ||
Sbjct 168731 TGCCGACCGTGGTGCCTTCATTGACCAGTCCCAGTCACTCAACATCCACATGAAGGAGCC 168790
Query 55846 TTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGG 55905
| ||| |||| | | ||| ||||||||| ||| |||||| || |||||||| ||
Sbjct 168791 CACCATGGGCAAGATCACCTCCATGCACTTTGCCGGATGGAAGCTTGGTCTCAAGACAGG 168850
Query 55906 TATGTACTATCTGCGGACC 55924
||||||||||| || |||
Sbjct 168851 CATGTACTATCTCCGTACC 168869
Score = 86.0 bits (94), Expect = 7e-12
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543
|||||||| ||||| | || || |||||||| || ||||| ||||||| | || |||
Sbjct 168426 CGCAACTCGCTGCTGATTGCACCTATGCCAACTGCCTCGACCTCTCAGATTCTCGGAAAC 168485
Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603
|| ||| |||||||| ||||| ||||||||||| ||||| || || ||||||
Sbjct 168486 AATGAGTGCTTCGAGCCCTACACCTCCAACATCTACTCACGCCGTGTGCTCGCGGGTGAG 168545
Query 55604 TT 55605
||
Sbjct 168546 TT 168547
>seq154
Length=40832
Score = 111 bits (122), Expect = 2e-19
Identities = 297/444 (67%), Gaps = 14/444 (3%)
Strand=Plus/Minus
Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522
|| |||||||| ||||| || || ||||||||||| || | | |||||||||||||||
Sbjct 13778 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCAAGCGAGATGTTCTCCATG 13719
Query 74523 CAGTCGAAAGGGTTCTTTGCACCGTAAA--TAGGCTTCTCCCCAAACTGTGCCATGAGGC 74580
|||| || ||||| | || ||||| | || | | ||||| | || | || |
Sbjct 13718 AAGTCAAAGGGGTTGGTGGCGTGGTAAACCTTGGTGT-TGCCCAATGCGAGC-AGCAGAC 13661
Query 74581 GATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAGTTTGC 74640
|||| || ||||| | ||||||||| ||| || | |||||||| || |
Sbjct 13660 GATCAGCGACAAACTCAATGTACTGGCACATGAGCTTGGCGTTCATGCCGAGCAGAGCAC 13601
Query 74641 ACGGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCCCATTGGACAAT--CTT 74698
| ||||| || ||| ||| ||||| ||| | || |||| || || |||
Sbjct 13600 AGGGCAGAGCGTCGCTGAGGAACTCTTGCTCAATCTGAACAGCCTCGGTGATGATGGCTT 13541
Query 74699 GTGAATGTCT--TTGGAAGGGCACTTTTCCCTCAGGTGAGAGTAAAGC-GTCACGGCAAA 74755
| || | || ||| |||| | | | || ||||| | ||| | || ||| ||
Sbjct 13540 G-GACGGCCTCCTTGCTGGGGCGGGTGT---TGAGAAGAGAGAAGAGCAGGCA-GGCGAA 13486
Query 74756 CTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCAT 74815
|| ||| ||| ||||| | || | || || || || | ||||||||||||
Sbjct 13485 GTCAGTGTGCATGCCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTAAGGCCAGGCAT 13426
Query 74816 AAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTC 74875
|| ||||||||||||||||| ||||||| ||| ||||| || |||||||| || ||
Sbjct 13425 TAGGCCACGCTTCTTCAACCAGAAGATGGATGCGAACGAACCGCTAAAGAAGATACCCTC 13366
Query 74876 GACACACGCAAAGGCGACAAGGCG 74899
||| || || |||||||| ||
Sbjct 13365 AACAGCAGCGAACGCGACAAGACG 13342
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547213441765200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |